Information report for AT2G25970
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation. DOI: 10.1242/jcs.00715 ; PMID: 12953064
- Intergenic and genic sequence lengths have opposite relationships with respect to gene expression. DOI: 10.1371/journal.pone.0003670 ; PMID: 18989364
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana. DOI: 10.3390/ijms23010511 ; PMID: 35008936
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: O82762
- EMBL: AC004747, AC005395, AK226845
- AlphaFoldDB: O82762
- EnsemblPlants: AT2G25970.1
- Gramene: AT2G25970.1
- KEGG: ath:AT2G25970
- Orthologous matrix: PTQDGHT
Homologs
- Brachypodium distachyon BRADI_1g14320v3
- Lactuca sativa gene-LSAT_7X72301
- Musa acuminata GSMUA_AchrUn_randomP03750_001
- Panicum virgatum Pavir.6KG056200.5.p, Pavir.6KG056200.1.p, Pavir.6KG056200.2.p, Pavir.6KG056200.4.p, Pavir.6KG056200.3.p
- Saccharum spontaneum Sspon.01G0023710-1A, Sspon.01G0023710-2B
- Solanum lycopersicum Solyc10g080480.2, Solyc10g080480.1.1
- Triticum aestivum TraesCS4A02G245800
Sequences
cDNA Sequence
- >AT2G25970.1
ATATATAAATAATCGCGTGTGTGTTCACCTCTCAGTTGTTTTCCTTCTTCTTCCTTATCTCCGCCTCTTTCTAGGGTTTCTCTCAAATCAGCTCTTCAACCATGGCGGACGAATCTCAATACTCATCGGATACTTACTCCAACAAACGCAAATACGAAGAACCAACCGCTCCTCCTCCATCAACTCGCAGACCTACCGGCTTCTCTTCTGGTCCGATCCCATCTGCTTCAGTTGATCCCACCGCACCTACCGGTCTTCCACCTTCTTCTTACAACAGCGTTCCTCCTCCGATGGATGAAATCCAGATTGCTAAACAAAAAGCACAAGAAATCGCTGCTCGTCTTCTTAATAGCGCTGATGCTAAACGTCCTCGTGTTGACAATGGTGCTTCTTATGATTATGGTGACAACAAAGGATTTAGCTCATATCCCTCTGAGGGTAAGCAGATGTCAGGGACGGTTCCGTCTTCGATACCGGTTTCGTATGGTAGCTTTCAAGGAACTACTAAGAAGATTGATATTCCGAATATGAGAGTTGGTGTTATCATTGGTAAAGGTGGAGAGACTATTAAGTATCTTCAGCTTCAGTCTGGAGCTAAGATTCAGGTTACTAGAGATATGGATGCAGACCCTAATTGTGCTACTAGGACTGTTGACCTAACTGGTACCCCTGATCAGATCTCAAAGGCTGAACAGTTGATCACTGACGTCCTTCAAGAGGCTGAGGCAGGCAATACAGCTGGTTCAGGTGGAGGAGGCGGCCGTAGGATGGGTGGACAAGCAGGGGCTGATCAATTTGTTATGAAAATTCCGAATAACAAGGTTGGTTTGATAATTGGTAAAGGAGGTGAAACAATCAAATCTATGCAAGCTAAGACTGGAGCTAGAATTCAGGTTATTCCTTTACATTTGCCCCCTGGAGACCCAACGCCAGAACGGACTTTGCAGATTGATGGGATAACCGAACAGATTGAACATGCTAAACAATTAGTTAATGAAATCATCAGTGGCGAGAACCGTATGAGAAACTCAGCAATGGGTGGAGGCTATCCACAACAAGGTGGTTATCAAGCCCGCCCACCCTCAAGCTGGGCACCACCTGGTGGTCCGCCAGCACAACCTGGTTATGGTGGTTACATGCAACCAGGAGCATATCCAGGTCCACCTCAGTATGGTCAATCACCTTACGGAAGTTACCCTCAACAAACTTCAGCTGGTTACTATGATCAGTCCTCTGTGCCACCATCCCAGCAGAGCGCGCAAGGTGAGTATGATTATTACGGTCAGCAACAGTCTCAGCAACCAAGCAGTGGTGGTAGCTCAGCCCCACCAACAGATACCACAGGGTACAATTACTACCAGCATGCTTCTGGTTATGGCCAAGCTGGTCAGGGATACCAGCAAGATGGGTATGGAGCTTACAATGCCTCGCAGCAATCGGGATATGGTCAAGCTGCTGGGTATGATCAACAGGGTGGTTACGGCAGCACCACTAATCCAAGTCAAGAGGAAGATGCATCTCAAGCCGCTCCACCATCGTCAGCTCAGTCTGGACAGGCTGGGTATGGTACAACTGGTCAACAGCCGCCTGCTCAAGGTAGTACTGGTCAGGCAGGGTATGGAGCTCCTCCAACTTCTCAGGCTGGTTACAGCAGCCAGCCAGCAGCAGCTTACAATTCTGGGTATGGAGCACCACCACCTGCTTCAAAGCCACCGACTTATGGCCAGAGCCAGCAGTCTCCAGGTGCTCCTGGGAGCTATGGTAGTCAGTCTGGGTATGCCCAACCAGCAGCTTCAGGGTATGGACAACCTCCAGCGTATGGGTATGGTCAAGCGCCACAGGGATATGGGTCTTATGGAGGATACACACAACCTGCTGCTGGTGGAGGTTACTCTTCAGACGGGTCTGCTGGAGCCACTGCTGGTGGTGGTGGTGGTACACCAGCTTCACAGAGTGCTGCTCCACCTGCTGGACCGCCCAAAGCATCCCCGAAAAGTTGATATGTGTATGGATAAATTTCTACTGTTATACAAAACATGCTTCCATGCTCTTATCTTTTTCTTGAGGATTTATCAATGTTTGTGTTTCACATTTTAGCTCTTGTCTGTCAACTCTCTTTATATTAAAGATAATGTTACGTTTTAGCCTGTTATTCTTCTTACAATGATTCAAATTCACCAAAATTTTAAATCCGAAAATTATAATTTGCTAAACCCAAAAAA
CDS Sequence
- >AT2G25970.1
ATGGCGGACGAATCTCAATACTCATCGGATACTTACTCCAACAAACGCAAATACGAAGAACCAACCGCTCCTCCTCCATCAACTCGCAGACCTACCGGCTTCTCTTCTGGTCCGATCCCATCTGCTTCAGTTGATCCCACCGCACCTACCGGTCTTCCACCTTCTTCTTACAACAGCGTTCCTCCTCCGATGGATGAAATCCAGATTGCTAAACAAAAAGCACAAGAAATCGCTGCTCGTCTTCTTAATAGCGCTGATGCTAAACGTCCTCGTGTTGACAATGGTGCTTCTTATGATTATGGTGACAACAAAGGATTTAGCTCATATCCCTCTGAGGGTAAGCAGATGTCAGGGACGGTTCCGTCTTCGATACCGGTTTCGTATGGTAGCTTTCAAGGAACTACTAAGAAGATTGATATTCCGAATATGAGAGTTGGTGTTATCATTGGTAAAGGTGGAGAGACTATTAAGTATCTTCAGCTTCAGTCTGGAGCTAAGATTCAGGTTACTAGAGATATGGATGCAGACCCTAATTGTGCTACTAGGACTGTTGACCTAACTGGTACCCCTGATCAGATCTCAAAGGCTGAACAGTTGATCACTGACGTCCTTCAAGAGGCTGAGGCAGGCAATACAGCTGGTTCAGGTGGAGGAGGCGGCCGTAGGATGGGTGGACAAGCAGGGGCTGATCAATTTGTTATGAAAATTCCGAATAACAAGGTTGGTTTGATAATTGGTAAAGGAGGTGAAACAATCAAATCTATGCAAGCTAAGACTGGAGCTAGAATTCAGGTTATTCCTTTACATTTGCCCCCTGGAGACCCAACGCCAGAACGGACTTTGCAGATTGATGGGATAACCGAACAGATTGAACATGCTAAACAATTAGTTAATGAAATCATCAGTGGCGAGAACCGTATGAGAAACTCAGCAATGGGTGGAGGCTATCCACAACAAGGTGGTTATCAAGCCCGCCCACCCTCAAGCTGGGCACCACCTGGTGGTCCGCCAGCACAACCTGGTTATGGTGGTTACATGCAACCAGGAGCATATCCAGGTCCACCTCAGTATGGTCAATCACCTTACGGAAGTTACCCTCAACAAACTTCAGCTGGTTACTATGATCAGTCCTCTGTGCCACCATCCCAGCAGAGCGCGCAAGGTGAGTATGATTATTACGGTCAGCAACAGTCTCAGCAACCAAGCAGTGGTGGTAGCTCAGCCCCACCAACAGATACCACAGGGTACAATTACTACCAGCATGCTTCTGGTTATGGCCAAGCTGGTCAGGGATACCAGCAAGATGGGTATGGAGCTTACAATGCCTCGCAGCAATCGGGATATGGTCAAGCTGCTGGGTATGATCAACAGGGTGGTTACGGCAGCACCACTAATCCAAGTCAAGAGGAAGATGCATCTCAAGCCGCTCCACCATCGTCAGCTCAGTCTGGACAGGCTGGGTATGGTACAACTGGTCAACAGCCGCCTGCTCAAGGTAGTACTGGTCAGGCAGGGTATGGAGCTCCTCCAACTTCTCAGGCTGGTTACAGCAGCCAGCCAGCAGCAGCTTACAATTCTGGGTATGGAGCACCACCACCTGCTTCAAAGCCACCGACTTATGGCCAGAGCCAGCAGTCTCCAGGTGCTCCTGGGAGCTATGGTAGTCAGTCTGGGTATGCCCAACCAGCAGCTTCAGGGTATGGACAACCTCCAGCGTATGGGTATGGTCAAGCGCCACAGGGATATGGGTCTTATGGAGGATACACACAACCTGCTGCTGGTGGAGGTTACTCTTCAGACGGGTCTGCTGGAGCCACTGCTGGTGGTGGTGGTGGTACACCAGCTTCACAGAGTGCTGCTCCACCTGCTGGACCGCCCAAAGCATCCCCGAAAAGTTGA
Protein Sequence
- >AT2G25970.1
MADESQYSSDTYSNKRKYEEPTAPPPSTRRPTGFSSGPIPSASVDPTAPTGLPPSSYNSVPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGDNKGFSSYPSEGKQMSGTVPSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEIISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQPGYGGYMQPGAYPGPPQYGQSPYGSYPQQTSAGYYDQSSVPPSQQSAQGEYDYYGQQQSQQPSSGGSSAPPTDTTGYNYYQHASGYGQAGQGYQQDGYGAYNASQQSGYGQAAGYDQQGGYGSTTNPSQEEDASQAAPPSSAQSGQAGYGTTGQQPPAQGSTGQAGYGAPPTSQAGYSSQPAAAYNSGYGAPPPASKPPTYGQSQQSPGAPGSYGSQSGYAQPAASGYGQPPAYGYGQAPQGYGSYGGYTQPAAGGGYSSDGSAGATAGGGGGTPASQSAAPPAGPPKASPKS