Information report for AT2G25910
Gene Details
|
|
Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana. DOI: 10.3390/ijms23010511 ; PMID: 35008936
Gene Resources
- UniProt: O82306
- EMBL: AC005395, AF361606, AY074840
- AlphaFoldDB: O82306
- EnsemblPlants: AT2G25910.1
- Gramene: AT2G25910.1
- Orthologous matrix: CINDNDY
- ExpressionAtlas: AT2G25910
- InterPro: IPR002562, IPR004087, IPR004088
- PANTHER: PTHR46814, PTHR46814:SF1
- SUPFAM: SSF53098, SSF54791
- PROSITE: PS50084
- Gene3D: 3.30.1370.10, 3.30.420.10
- SWISS-MODEL: O82306
- Conserved Domain Database: cd00105, cd06148
Homologs
- Beta vulgaris BVRB_2g028440
- Brassica napus BnaA01G0251300ZS
- Brassica rapa Bra021339
- Cucumis sativus CsGy4G010610
- Daucus carota DCAR_009083
- Glycine max Glyma.19G115100
- Gossypium hirsutum Gohir.A13G164100, Gohir.D13G167000
- Lactuca sativa gene-LSAT_6X31721
- Rosa chinensis RchiOBHm_Chr3g0496321
- Sesamum indicum SIN_1003534
Sequences
cDNA Sequence
- >AT2G25910.1
AACGAACCCATCCGTTGGTGAATCTGGACAGTCCCCTCAAATAAAAGTTGTGAGAGCTGTTTCGTCGCTTTGATCGAAATGGCGTCGTCTTCTCCAACTCAGCTAGCTCACGTCCCGATTCCTCCAGAACCAGGAGGAAGGTCGCCGACACAAGAAGCTAATGAGCCACCAGTTCCGATTTACATTGTGACGGATCCGTTTCAACTTCCTGCTGATTTCCTAAACCCTTCTCCTGAAAAGAAATTGGTTATCGGTTTTGACTGTGAGGGTGTTGACCTCTGCCGACATGGGAAACTTTGTATCATGCAGATTGCATTCTCTAATGCAATATACTTGGTTGATGTCATCGAAGGTGGAGAGGTGATTATGAAAGCGTGTAAGCCTGCACTCGAGTCTAATTACATCACGAAAGTTATTCACGATTGCAAGCGTGACAGTGAGGCTCTATACTTCCAGTTTGGGATAAGATTGCACAATGTTGTGGACACTCAGATTGCTTATTCTCTGATTGAAGAACAAGAAGGGCGGAGGAGACCTCTAGATGATTACATATCGTTTGTTTCACTCCTTGCTGATCCACGTTACTGCGGTATATCCTATGAAGAGAAAGAAGAAGTTCGAGTTCTCATGCGCCAGGACCCAAAGTTTTGGACATACAGGCCTATGACTGAGCTCATGATCCGCGCAGCTGCTGATGATGTCCGCTTCCTTCTGTATCTCTATCACAAAATGATGGGAAAGCTAAATCAGCGGTCACTATGGCATCTTGCAGTTCGTGGTGCTTTGTACTGTCGGTGTCTCTGCTGCATGAATGATGCTGATTTTGCTGATTGGCCAACCGTTCCTCCAATTCCAGATAACCTGAAGTCAGAAGATCAATGTCTTGAAGAAGAGATCCTGTCAGTGCTTGATGTTCCACCAGGAAAGATGGGACGTGTGATTGGAAGGAAAGGAGCATCGATCCTCGCCATTAAGGAAGCTTGCAACGCGGAAATTCTAATTGGAGGGGCAAAGGGTCCACCTGATAAGATATTTGTGATTGGACCGGTGAGAGAAGTGCGTAAGGCGGAGGCTATACTGAGAGGAAGAATGATAGACTATTGAAGGAAATGAGGGTCCTTTGTAATCTGTCTCATTGCCCCTATAAAAAAAAATACTAAAACCCTCTTAAAACTTGGAAACTCCATGGTTCAGTACGGACCCGAGAGAGTCGTCCCCTCTTCAATAAAAGTTACATCATTAACTTCCGTTTATACTGTGGAACTTACCATTCCATTTCCCGCAAGGGACTTCATAGTTTGATGAAACAAAAAGACCATATCAAGTATGGTTTATTGGCAAATGCAAGAGTAGTTTATCTGATTGACCGTTAAGATTGATTTTATTTACTTTGCGACTCAAATTGAGAGTCTGAAACCCAACGGTCTTATATTTTGGTATAGTAACATTCAAGCCTCAATTGGTTTGTAAACCTGTTCTGTTTCCTTTTGTGTTAGTGAAACTGATAGTTCAAAGTTCTAATTACGTTTTATAGGGG - >AT2G25910.2
AACGAACCCATCCGTTGGTGAATCTGGACAGTCCCCTCAAATAAAAGTTGTGAGAGCTGTTTCGTCGCTTTGATCGAAATGGCGTCGTCTTCTCCAACTCAGCTAGCTCACGTCCCGATTCCTCCAGAACCAGGAGGAAGGTCGCCGACACAAGAAGCTAATGAGCCACCAGTTCCGATTTACATTGTGACGGATCCGTTTCAACTTCCTGCTGATTTCCTAAACCCTTCTCCTGAAAAGAAATTGGTTATCGGTTTTGACTGTGAGGGTGTTGACCTCTGCCGACATGGGAAACTTTGTATCATGCAGATTGCATTCTCTAATGCAATATACTTGGTTGATGTCATCGAAGGTGGAGAGGTGATTATGAAAGCGTGTAAGCCTGCACTCGAGTCTAATTACATCACGAAAGTTATTCACGATTGCAAGCGTGACAGTGAGGCTCTATACTTCCAGTTTGGGATAAGATTGCACAATGTTGTGGACACTCAGATTGCTTATTCTCTGATTGAAGAACAAGAAGGGCGGAGGAGACCTCTAGATGATTACATATCGTTTGTTTCACTCCTTGCTGATCCACGTTACTGCGGTATATCCTATGAAGAGAAAGAAGAAGTTCGAGTTCTCATGCGCCAGGACCCAAAGTTTTGGACATACAGGCCTATGACTGAGCTCATGATCCGCGCAGCTGCTGATGATGTCCGCTTCCTTCTGTATCTCTATCACAAAATGATGGGAAAGCTAAATCAGCGGTCACTATGGCATCTTGCAGTTCGTGGTGCTTTGTACTGTCGGTGTCTCTGCTGCATGAATGATGCTGATTTTGCTGATTGGCCAACCGTTCCTCCAATTCCAGATAACCTGAAGTCAGAAGATCAATGTCTTGAAGAAGAGATCCTGTCAGTGCTTGATGTTCCACCAGGAAAGATGGGACGTGTGATTGGAAGGAAAGGAGCATCGATCCTCGCCATTAAGGAAGCTTGCAACGCGGAAATTCTAATTGGAGGGGCAAAGGGTCCACCTGATAAGATATTTGTGATTGGACCGGTGAGAGAAGTGCGTAAGGCGGAGGCTATACTGAGAGGAAGAATGATAGACTATTGAAGGAAATGAGGGTCCTTTGTAATCTGTCTCATTGCCCCTATAAAAAAAAATACTAAAACCCTCTTAAAACTTGGAAACTCCATGGTTCAGTACGGACCCGAGAGAGTCGTCCCCTCTTCAATAAAAGTTACATCATTAACTTCCGTTTATACTGTGGAACTTACCATTCCATTTCCCGCAAGGGACTTCATAGTTTGATGAAACAAAAAGACCATATCAAGTATGGTTTATTGGCAAATGCAAGAGTAGTTTATCTGATTGACCGTTAAGATTGATTTTATTTACTTTGCGACTCAAATTGAGAGTCTGAAACCCAACGGTCTTATATTTTGGTATAGTAACATTCAAGCCTCAATTGGTTTGTAAACCTGTTCTGTTTCCTTTTGTGTTAGTGAAACTGATAGTTCAAAGTTCTAATTACGTTTTATAGGGG
CDS Sequence
- >AT2G25910.1
ATGGCGTCGTCTTCTCCAACTCAGCTAGCTCACGTCCCGATTCCTCCAGAACCAGGAGGAAGGTCGCCGACACAAGAAGCTAATGAGCCACCAGTTCCGATTTACATTGTGACGGATCCGTTTCAACTTCCTGCTGATTTCCTAAACCCTTCTCCTGAAAAGAAATTGGTTATCGGTTTTGACTGTGAGGGTGTTGACCTCTGCCGACATGGGAAACTTTGTATCATGCAGATTGCATTCTCTAATGCAATATACTTGGTTGATGTCATCGAAGGTGGAGAGGTGATTATGAAAGCGTGTAAGCCTGCACTCGAGTCTAATTACATCACGAAAGTTATTCACGATTGCAAGCGTGACAGTGAGGCTCTATACTTCCAGTTTGGGATAAGATTGCACAATGTTGTGGACACTCAGATTGCTTATTCTCTGATTGAAGAACAAGAAGGGCGGAGGAGACCTCTAGATGATTACATATCGTTTGTTTCACTCCTTGCTGATCCACGTTACTGCGGTATATCCTATGAAGAGAAAGAAGAAGTTCGAGTTCTCATGCGCCAGGACCCAAAGTTTTGGACATACAGGCCTATGACTGAGCTCATGATCCGCGCAGCTGCTGATGATGTCCGCTTCCTTCTGTATCTCTATCACAAAATGATGGGAAAGCTAAATCAGCGGTCACTATGGCATCTTGCAGTTCGTGGTGCTTTGTACTGTCGGTGTCTCTGCTGCATGAATGATGCTGATTTTGCTGATTGGCCAACCGTTCCTCCAATTCCAGATAACCTGAAGTCAGAAGATCAATGTCTTGAAGAAGAGATCCTGTCAGTGCTTGATGTTCCACCAGGAAAGATGGGACGTGTGATTGGAAGGAAAGGAGCATCGATCCTCGCCATTAAGGAAGCTTGCAACGCGGAAATTCTAATTGGAGGGGCAAAGGGTCCACCTGATAAGATATTTGTGATTGGACCGGTGAGAGAAGTGCGTAAGGCGGAGGCTATACTGAGAGGAAGAATGATAGACTATTGA - >AT2G25910.2
ATGGCGTCGTCTTCTCCAACTCAGCTAGCTCACGTCCCGATTCCTCCAGAACCAGGAGGAAGGTCGCCGACACAAGAAGCTAATGAGCCACCAGTTCCGATTTACATTGTGACGGATCCGTTTCAACTTCCTGCTGATTTCCTAAACCCTTCTCCTGAAAAGAAATTGGTTATCGGTTTTGACTGTGAGGGTGTTGACCTCTGCCGACATGGGAAACTTTGTATCATGCAGATTGCATTCTCTAATGCAATATACTTGGTTGATGTCATCGAAGGTGGAGAGGTGATTATGAAAGCGTGTAAGCCTGCACTCGAGTCTAATTACATCACGAAAGTTATTCACGATTGCAAGCGTGACAGTGAGGCTCTATACTTCCAGTTTGGGATAAGATTGCACAATGTTGTGGACACTCAGATTGCTTATTCTCTGATTGAAGAACAAGAAGGGCGGAGGAGACCTCTAGATGATTACATATCGTTTGTTTCACTCCTTGCTGATCCACGTTACTGCGGTATATCCTATGAAGAGAAAGAAGAAGTTCGAGTTCTCATGCGCCAGGACCCAAAGTTTTGGACATACAGGCCTATGACTGAGCTCATGATCCGCGCAGCTGCTGATGATGTCCGCTTCCTTCTGTATCTCTATCACAAAATGATGGGAAAGCTAAATCAGCGGTCACTATGGCATCTTGCAGTTCGTGGTGCTTTGTACTGTCGGTGTCTCTGCTGCATGAATGATGCTGATTTTGCTGATTGGCCAACCGTTCCTCCAATTCCAGATAACCTGAAGTCAGAAGATCAATGTCTTGAAGAAGAGATCCTGTCAGTGCTTGATGTTCCACCAGGAAAGATGGGACGTGTGATTGGAAGGAAAGGAGCATCGATCCTCGCCATTAAGGAAGCTTGCAACGCGGAAATTCTAATTGGAGGGGCAAAGGGTCCACCTGATAAGATATTTGTGATTGGACCGGTGAGAGAAGTGCGTAAGGCGGAGGCTATACTGAGAGGAAGAATGATAGACTATTGA
Protein Sequence
- >AT2G25910.1
MASSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDADFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEACNAEILIGGAKGPPDKIFVIGPVREVRKAEAILRGRMIDY - >AT2G25910.2
MASSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGFDCEGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDSEALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEVRVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDADFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEACNAEILIGGAKGPPDKIFVIGPVREVRKAEAILRGRMIDY