Information report for AT2G25870
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- Mining the soluble chloroplast proteome by affinity chromatography. DOI: 10.1002/pmic.201000495 ; PMID: 21365755
- The conserved endoribonuclease YbeY is required for chloroplast ribosomal RNA processing in Arabidopsis. DOI: 10.1104/pp.114.255000 ; PMID: 25810095
Gene Resources
- UniProt: A0A178VS39
- EMBL: LUHQ01000002
- AlphaFoldDB: A0A178VS39
- EnsemblPlants: AT2G25870.1
- Gramene: AT2G25870.1
- KEGG: ath:AT2G25870
- Orthologous matrix: KMRKRAP
- ExpressionAtlas: AT2G25870
- InterPro: IPR000150, IPR002036, IPR006379
- PANTHER: PTHR46986, PTHR46986:SF1
- SUPFAM: SSF55486, SSF56784
- PROSITE: PS01228, PS01229, PS01306
- Gene3D: 3.30.1240.10, 3.40.390.30, 3.40.50.1000
- SWISS-MODEL: A0A178VS39
- Conserved Domain Database: cd07516
Sequences
cDNA Sequence
- >AT2G25870.1
TCTTATCCCCCAGCCCCCAATTCATTTTTCTCATATGGTCCTGGTAAAAATGTTGACCATCCGGTTTATGATAAAAATCATTTTCGGTTTAGATTTTAATAATCTCGGTTCGATTTAGTATTTGTATCTCCCCACCCTTTAAGCCAGAAGTGCAGAGACGCCTCCTTCTCTCGCCTCCGTGTCTCTCCAATGCTCTCTCGTGTCTGCCCAACCCTCCGCTATAATCGTATCTGGTCTGCTCATGCGCGTGAAATGCCACGCGCCACCCTCCTTCTCCTCCAACCCAACTTCTTCCACTCTTCCCCCAAAACTGCTCTTGTGAATCGTCTCGATGTTACTTCATCGGAGTTTTCTTCCATGTTCCGTCGGAGCTTCCACGCTTTACGCAGCACCGTAGGAGACTGGAGAAAGCTTCCGAAACCGCCGGGTCAGGTTTTTGCGGAGAGGAGAGAATACAGGAAGATTAGAAGGAGAGCTCCGAAGAAGAAACAGGAATTGGAGCTTAGTGTTAGTATCTGCATCGAAGAACAGCTTCCTGATGATCTCGAGATTCAGAATATTGCAGAAATGCTTCGTCTCAATGTACCTATGGCAATGACATTGGCTTTCAATGGTTTGAAAGATTCAAAGTATAAAACAAGAGAGACTGATATAGAAGATCTTGGTGGGTATGAAACTGTTGAATTATCGGTGATGCTTTGTAATGATGATTTTATTTGTAAACTCAACAAAGAGTGGAGAGGTGAAGATCATGCTACTGATGTGCTTTCCATGTCACAACATGTCCCTGAACTGAAGCTTCCAGTACTTATGATGGGAGATCTCGTCATTTCTGTTGAGACAGCTGCAAGGCAAGCTGCAGAGAGAGGGCATACTCTTCTTGATGAAATACGCATTCTTGTGATTCATGGGTTGCTACATCTACTGGGATTTGATCATGAAATCAGCGACGAGGCTGAGCAAGAAATGGAAGAGGAAGAGGAGTTGTTGCTAAAAAACCTTGGGTGGAAAGGAAAAGGACTCATTCAGAGTGCATATGACATTCAAAAAACAACTACAGTTCAGCCGGAGAAATCAGATGACAGGAAGGAAGGGGATGGCCTAAGATTGTACAAACCAAAGTTCTCCTATATATTCTGTGATATGGATGGTACACTGCTTAACAGTAAAAGTCAGATTTCGGAGGCAAATGCAAAAGCTTTAAAAGAAGCCCTTCTGAGGGGACTTAAAGTAGTCATAGCTACGGGGAAGTCCCGCCCAGGTGCGATCAGAATCTTGAAGACGGCTGATCTAACTGGATCCGATGGCATTATCTCAGAGTCCTCTCCAGGCGTTTTCGTTCAGGGATTACTTGTCTATGGTAGACAAGGGAAAGAAGTGTATCGAGGAAACTTAGACCGAGATGTCTGCAGAGAGACCTGTCTTTATTCTTTGGAGCATCGAATTCCTCTCATTGCATTCAGCCAGGATCGCTGCTTGACATTGTTTGACCACCCTCTTGTCGACTCTCTTCACACAATCTACAATGAGCCAAAGGCCGAAATTATATCATCGGTTGATCAACTGATAGCTGAAGCTGACATTCAGAAAGTGATATTTATGGACACAACCGAGGGAGTCTCATCTGTTATCCGTCCGTATTGGTCAGAAGCTACAGGAGACCGTGCTAATGTTGTTCAAGCTCAATCAGACATGCTAGAAATCGTCCCACCCGGAACCTCCAAAGGGAATGGTGTAAAAATGCTACTCAATCATTTGGGCGTTTCACCGGATGAGATAATGGCGATTGGAGATGGAGAAAATGACATAGAGATGCTGCAACTGGCCTCGTTGGGAGTTGCTCTGAGCAACGGTGCAGAAAAAACAAAGGCGGTGGCTGATGTGATTGGTGTGAGCAACGACCAAGATGGTGTTGCTGATGCCATCTACCGCTACGCATTCTGAGACTCCACCACCATATTTAAGTACAAGATACACCAAATTAAATTTTTGAGGTTAAGTAGGCATTATTCTTCTTCTTTGTCTTACAGATAAAAGACAAACATTGGTCATTCTTGTCTCATTCACCCACCTTTTGAAGGAAAATGATTGATTGCAGAGTGCGTCTCTTGTTGTTTTGTTCATGTTCGGTTAATCTTTCATTCGTTTGCCTTTGCACCTTTGCATCTTACAACATAAAAAATGTTCCGGATCTCTTGTGAACAAATCCATCTCATTTGGTT
CDS Sequence
- >AT2G25870.1
ATGCTCTCTCGTGTCTGCCCAACCCTCCGCTATAATCGTATCTGGTCTGCTCATGCGCGTGAAATGCCACGCGCCACCCTCCTTCTCCTCCAACCCAACTTCTTCCACTCTTCCCCCAAAACTGCTCTTGTGAATCGTCTCGATGTTACTTCATCGGAGTTTTCTTCCATGTTCCGTCGGAGCTTCCACGCTTTACGCAGCACCGTAGGAGACTGGAGAAAGCTTCCGAAACCGCCGGGTCAGGTTTTTGCGGAGAGGAGAGAATACAGGAAGATTAGAAGGAGAGCTCCGAAGAAGAAACAGGAATTGGAGCTTAGTGTTAGTATCTGCATCGAAGAACAGCTTCCTGATGATCTCGAGATTCAGAATATTGCAGAAATGCTTCGTCTCAATGTACCTATGGCAATGACATTGGCTTTCAATGGTTTGAAAGATTCAAAGTATAAAACAAGAGAGACTGATATAGAAGATCTTGGTGGGTATGAAACTGTTGAATTATCGGTGATGCTTTGTAATGATGATTTTATTTGTAAACTCAACAAAGAGTGGAGAGGTGAAGATCATGCTACTGATGTGCTTTCCATGTCACAACATGTCCCTGAACTGAAGCTTCCAGTACTTATGATGGGAGATCTCGTCATTTCTGTTGAGACAGCTGCAAGGCAAGCTGCAGAGAGAGGGCATACTCTTCTTGATGAAATACGCATTCTTGTGATTCATGGGTTGCTACATCTACTGGGATTTGATCATGAAATCAGCGACGAGGCTGAGCAAGAAATGGAAGAGGAAGAGGAGTTGTTGCTAAAAAACCTTGGGTGGAAAGGAAAAGGACTCATTCAGAGTGCATATGACATTCAAAAAACAACTACAGTTCAGCCGGAGAAATCAGATGACAGGAAGGAAGGGGATGGCCTAAGATTGTACAAACCAAAGTTCTCCTATATATTCTGTGATATGGATGGTACACTGCTTAACAGTAAAAGTCAGATTTCGGAGGCAAATGCAAAAGCTTTAAAAGAAGCCCTTCTGAGGGGACTTAAAGTAGTCATAGCTACGGGGAAGTCCCGCCCAGGTGCGATCAGAATCTTGAAGACGGCTGATCTAACTGGATCCGATGGCATTATCTCAGAGTCCTCTCCAGGCGTTTTCGTTCAGGGATTACTTGTCTATGGTAGACAAGGGAAAGAAGTGTATCGAGGAAACTTAGACCGAGATGTCTGCAGAGAGACCTGTCTTTATTCTTTGGAGCATCGAATTCCTCTCATTGCATTCAGCCAGGATCGCTGCTTGACATTGTTTGACCACCCTCTTGTCGACTCTCTTCACACAATCTACAATGAGCCAAAGGCCGAAATTATATCATCGGTTGATCAACTGATAGCTGAAGCTGACATTCAGAAAGTGATATTTATGGACACAACCGAGGGAGTCTCATCTGTTATCCGTCCGTATTGGTCAGAAGCTACAGGAGACCGTGCTAATGTTGTTCAAGCTCAATCAGACATGCTAGAAATCGTCCCACCCGGAACCTCCAAAGGGAATGGTGTAAAAATGCTACTCAATCATTTGGGCGTTTCACCGGATGAGATAATGGCGATTGGAGATGGAGAAAATGACATAGAGATGCTGCAACTGGCCTCGTTGGGAGTTGCTCTGAGCAACGGTGCAGAAAAAACAAAGGCGGTGGCTGATGTGATTGGTGTGAGCAACGACCAAGATGGTGTTGCTGATGCCATCTACCGCTACGCATTCTGA
Protein Sequence
- >AT2G25870.1
MLSRVCPTLRYNRIWSAHAREMPRATLLLLQPNFFHSSPKTALVNRLDVTSSEFSSMFRRSFHALRSTVGDWRKLPKPPGQVFAERREYRKIRRRAPKKKQELELSVSICIEEQLPDDLEIQNIAEMLRLNVPMAMTLAFNGLKDSKYKTRETDIEDLGGYETVELSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPELKLPVLMMGDLVISVETAARQAAERGHTLLDEIRILVIHGLLHLLGFDHEISDEAEQEMEEEEELLLKNLGWKGKGLIQSAYDIQKTTTVQPEKSDDRKEGDGLRLYKPKFSYIFCDMDGTLLNSKSQISEANAKALKEALLRGLKVVIATGKSRPGAIRILKTADLTGSDGIISESSPGVFVQGLLVYGRQGKEVYRGNLDRDVCRETCLYSLEHRIPLIAFSQDRCLTLFDHPLVDSLHTIYNEPKAEIISSVDQLIAEADIQKVIFMDTTEGVSSVIRPYWSEATGDRANVVQAQSDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDQDGVADAIYRYAF