Information report for AT2G25620
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0005515 — enables — protein binding
- GO:0006470 — involved in — protein dephosphorylation
- GO:0017018 — enables — myosin phosphatase activity
- GO:0005634 — located in — nucleus
- GO:0050688 — acts upstream of or within — regulation of defense response to virus
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Plant PP2C phosphatases: emerging functions in stress signaling. DOI: 10.1016/j.tplants.2004.03.007 ; PMID: 15130549
- Bicistronic and fused monocistronic transcripts are derived from adjacent loci in the Arabidopsis genome. DOI: 10.1261/rna.7114505 ; PMID: 15659355
- Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release. DOI: 10.1186/1741-7007-3-7 ; PMID: 15784138
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis. DOI: 10.1105/tpc.105.040097 ; PMID: 16829591
- 14-3-3 mediates transcriptional regulation by modulating nucleocytoplasmic shuttling of tobacco DNA-binding protein phosphatase-1. DOI: 10.1074/jbc.M512611200 ; PMID: 16762921
- Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings. DOI: 10.1111/j.1365-313X.2006.02979.x ; PMID: 17217462
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Genome-wide identification of osmotic stress response gene in Arabidopsis thaliana. DOI: 10.1016/j.ygeno.2008.08.011 ; PMID: 18804526
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis. DOI: 10.1186/1471-2164-9-550 ; PMID: 19021904
- DNA-binding protein phosphatase AtDBP1 mediates susceptibility to two potyviruses in Arabidopsis. DOI: 10.1104/pp.110.158923 ; PMID: 20508138
- A plant small polypeptide is a novel component of DNA-binding protein phosphatase 1-mediated resistance to plum pox virus in Arabidopsis. DOI: 10.1104/pp.111.188953 ; PMID: 22021419
- Arabidopsis protein phosphatase DBP1 nucleates a protein network with a role in regulating plant defense. DOI: 10.1371/journal.pone.0090734 ; PMID: 24595057
- Functional analysis of an auxin-inducible DNA-binding protein gene. DOI: 10.4161/15592324.2014.977706 ; PMID: 25482757
- DNA-binding protein phosphatase AtDBP1 acts as a promoter of flowering in Arabidopsis. DOI: 10.1007/s00425-015-2433-y ; PMID: 26586176
- Phosphatase AtDBP1 negatively regulates drought and salt tolerance through altering leaf surface permeability in Arabidopsis. DOI: 10.1007/s11033-020-05451-1 ; PMID: 32342434
Gene Resources
- UniProt: A0A178VZ04
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VZ04
- EnsemblPlants: AT2G25620.1, AT2G25620.2
- Gramene: AT2G25620.1, AT2G25620.2
- KEGG: ath:AT2G25620
- Orthologous matrix: FACHHIP
- ExpressionAtlas: AT2G25620
- InterPro: IPR000222, IPR001932, IPR015655
- PANTHER: PTHR13832, PTHR13832:SF790
- SUPFAM: SSF81606
- PROSITE: PS01032, PS51746
- Gene3D: 3.60.40.10
- OrthoDB: A0A178VZ04
- SWISS-MODEL: A0A178VZ04
- Conserved Domain Database: cd00143
Homologs
- Beta vulgaris BVRB_3g063620
- Lactuca sativa Lsat_1_v5_gn_9_32241
- Lotus japonicus Lj5g0002002
- Oryza sativa OsPP18;OsPP2C10, LOC_Os01g36080
- Panicum virgatum Pavir.5KG351700
- Saccharum spontaneum Sspon.03G0013630-1A
- Setaria italica Seita.5G191000
- Setaria viridis SEVIR_5G193200v2
- Triticum aestivum TaPP2C158
- Zea mays Zm00001d009364
Sequences
cDNA Sequence
- >AT2G25620.2
CGGACTCATATTTCTCGCCTCCGCCGGCGAACAGTTTTATTATCTCTCTCTTTCTGCGTGTTCCAATTTCTTCCACAAAACCCTAATTTTCTCTTAAACCCTGAAATTCGTGTAACCTTTCAACAATCTCTTCAATTTTGTTTTCGATTCTGAATCCATTGTTTACGAATCTCTCATCTAAAGCTACATTCTTCGTTAAATCGTTTTTAATCGACTCGCTCACTCGTGAGTTGACTCGTCAGCTGTTTCCATAATTGCTTATTGAATTTTTATACGATGATGTTTCAATATGGAAGAAACTAGAGGAATTTCTGATCCAGAGAATGGGAGTTCGAGTTACGGCGGTAAACCGCCGAATCCACTCTCCTTCTCTTCTTCCTCCGCCGCTGCTGCCGTTTACAGGCAAACCTTCGACGGCGAGCGATCGTTGGCGCCGTGTAATAAGAGGTCACTGGTTCGACACTCATCTCTCGTGAAGACAATGGTGTCAGATATATCTGTTGAGAATGAGTTTACTATAGAGAAGAACAAGTCTGAGTTTGTTCCTGCTACGCGTTCTGGAGCTTGGTCTGATATTGGCTCCAGGTCAAGCATGGAAGATGCTTATCTATGCGTTGATAATTTCATGGATAGCTTTGGCCTTCTGAATTCTGAGGCTGGTCCAAGTGCCTTCTATGGGGTATTTGATGGACATGGTGGGAAGCATGCCGCTGAGTTTGCATGTCACCATATACCGAGGTACATTGTTGAAGATCAAGAGTTTCCTAGTGAAATCAATAAGGTGTTATCTTCAGCATTTCTTCAAACAGACACTGCCTTCTTAGAGGCGTGTTCATTGGATGGGAGCCTTGCTTCAGGAACTACTGCTTTGGCAGCTATTCTTTTTGGAAGGTCGTTGGTGGTAGCAAACGCTGGAGATTGCAGAGCAGTCTTATCCCGTCAGGGAAAAGCCATTGAAATGTCAAGAGACCACAAACCCATGAGCAGTAAGGAAAGGAGACGCATTGAAGCATCGGGTGGACATGTATTCGATGGCTATCTAAATGGACAACTTAATGTGGCTCGAGCGCTAGGTGACTTTCATATGGAAGGCATGAAGAAGAAGAAAGATGGTTCTGATTGTGGACCTCTAATTGCAGAGCCTGAGCTCATGACAACAAAACTAACAGAAGAGGATGAGTTCCTTATAATTGGGTGTGACGGGGTTTGGGATGTGTTCATGAGCCAGAATGCTGTAGATTTTGCCAGAAGGAGACTACAGGAGCACAATGACCCGGTCATGTGTAGTAAGGAGCTGGTTGAGGAAGCTTTGAAGAGGAAGAGTGCTGATAATGTGACGGCAGTGGTTGTGTGTCTTCAGCCACAGCCACCACCGAACTTGGTAGCGCCGAGGTTGAGAGTTCACAGAAGCTTCTCGGCGGAGGGTTTAAAAGATTTACAGAGCTACTTGGATGGCTTGGGAAACTAATTGGGGGACATGAGGATGGTGACGAATGATTGATTTCTCTGTTTTTGTTTTGTCTTTTCTTACAATTTTATAGTTTGGGGTTTGGAGGTTTTGTTCTGTTAAATTCTCGCAATTTGAGTAAGTTATAACATGAGGCGGCATACAATAATTTATTGTTTGAATGACGTATGTTAGATATGCAGTAAACTCGAGGGTCGGCTTTGACCACATCGCCACTTATCGGTTTGCGGATGCTGGAAAAGTCAGTCTAGTGATGAGGCTGAGTGAGCCATCGTCAGTTACTATTTTATCGTGAAACTCTGAACAACGAGATTGTCCCG - >AT2G25620.1
CGGACTCATATTTCTCGCCTCCGCCGGCGAACAGTTTTATTATCTCTCTCTTTCTGCGTGTTCCAATTTCTTCCACAAAACCCTAATTTTCTCTTAAACCCTGAAATTCGTGTAACCTTTCAACAATCTCTTCAATTTTGTTTTCGATTCTGAATCCATTGTTTACGAATCTCTCATCTAAAGCTACATTCTTCGTTAAATCGTTTTTAATCGACTCGCTCACTCGTGAGTTGACTCGTCAGCTGTTTCCATAATTGCTTATTGAATTTTTATACGATGATGTTTCAATATGGAAGAAACTAGAGGAATTTCTGATCCAGAGAATGGGAGTTCGAGTTACGGCGGTAAACCGCCGAATCCACTCTCCTTCTCTTCTTCCTCCGCCGCTGCTGCCGTTTACAGGCAAACCTTCGACGGCGAGCGATCGTTGGCGCCGTGTAATAAGAGGTCACTGGTTCGACACTCATCTCTCGTGAAGACAATGGTGTCAGATATATCTGTTGAGAATGAGTTTACTATAGAGAAGAACAAGTCTGAGTTTGTTCCTGCTACGCGTTCTGGAGCTTGGTCTGATATTGGCTCCAGGTCAAGCATGGAAGATGCTTATCTATGCGTTGATAATTTCATGGATAGCTTTGGCCTTCTGAATTCTGAGGCTGGTCCAAGTGCCTTCTATGGGGTATTTGATGGACATGGTGGGAAGCATGCCGCTGAGTTTGCATGTCACCATATACCGAGGTACATTGTTGAAGATCAAGAGTTTCCTAGTGAAATCAATAAGGTGTTATCTTCAGCATTTCTTCAAACAGACACTGCCTTCTTAGAGGCGTGTTCATTGGATGGGAGCCTTGCTTCAGGAACTACTGCTTTGGCAGCTATTCTTTTTGGAAGGTCGTTGGTGGTAGCAAACGCTGGAGATTGCAGAGCAGTCTTATCCCGTCAGGGAAAAGCCATTGAAATGTCAAGAGACCACAAACCCATGAGCAGTAAGGAAAGGAGACGCATTGAAGCATCGGGTGGACATGTATTCGATGGCTATCTAAATGGACAACTTAATGTGGCTCGAGCGCTAGGTGACTTTCATATGGAAGGCATGAAGAAGAAGAAAGATGGTTCTGATTGTGGACCTCTAATTGCAGAGCCTGAGCTCATGACAACAAAACTAACAGAAGAGGATGAGTTCCTTATAATTGGGTGTGACGGGGTTTGGGATGTGTTCATGAGCCAGAATGCTGTAGATTTTGCCAGAAGGAGACTACAGGAGCACAATGACCCGGTCATGTGTAGTAAGGAGCTGGTTGAGGAAGCTTTGAAGAGGAAGAGTGCTGATAATGTGACGGCAGTGGTTGTGTGTCTTCAGCCACAGCCACCACCGAACTTGGTAGCGCCGAGGTTGAGAGTTCACAGAAGCTTCTCGGCGGAGGGTTTAAAAGATTTACAGAGCTACTTGGATGGCTTGGGAAACTAATTGGGGGACATGAGGATGGTGACGAATGATTGATTTCTCTGTTTTTGTTTTGTCTTTTCTTACAATTTTATAGTTTGGGGTTTGGAGGTTTTGTTCTGTTAAATTCTCGCAATTTGAGTAAGTTATAACATGAGGCGGCATACAATAATTTATTGTTTGAATGACGTATGTTAGATATGCAGTAAACTCGAGGGTCGGCTTTGACCACATCGCCACTTATCGGTTTGCGGATGCTGGAAAAGTCAGTCTAGTGATGAGGCTGAGTGAGCCATCGTCAGTTACTATTTTATCGTGAAACTCTGAACAACGAGATTGTCCCG
CDS Sequence
- >AT2G25620.2
ATGGAAGAAACTAGAGGAATTTCTGATCCAGAGAATGGGAGTTCGAGTTACGGCGGTAAACCGCCGAATCCACTCTCCTTCTCTTCTTCCTCCGCCGCTGCTGCCGTTTACAGGCAAACCTTCGACGGCGAGCGATCGTTGGCGCCGTGTAATAAGAGGTCACTGGTTCGACACTCATCTCTCGTGAAGACAATGGTGTCAGATATATCTGTTGAGAATGAGTTTACTATAGAGAAGAACAAGTCTGAGTTTGTTCCTGCTACGCGTTCTGGAGCTTGGTCTGATATTGGCTCCAGGTCAAGCATGGAAGATGCTTATCTATGCGTTGATAATTTCATGGATAGCTTTGGCCTTCTGAATTCTGAGGCTGGTCCAAGTGCCTTCTATGGGGTATTTGATGGACATGGTGGGAAGCATGCCGCTGAGTTTGCATGTCACCATATACCGAGGTACATTGTTGAAGATCAAGAGTTTCCTAGTGAAATCAATAAGGTGTTATCTTCAGCATTTCTTCAAACAGACACTGCCTTCTTAGAGGCGTGTTCATTGGATGGGAGCCTTGCTTCAGGAACTACTGCTTTGGCAGCTATTCTTTTTGGAAGGTCGTTGGTGGTAGCAAACGCTGGAGATTGCAGAGCAGTCTTATCCCGTCAGGGAAAAGCCATTGAAATGTCAAGAGACCACAAACCCATGAGCAGTAAGGAAAGGAGACGCATTGAAGCATCGGGTGGACATGTATTCGATGGCTATCTAAATGGACAACTTAATGTGGCTCGAGCGCTAGGTGACTTTCATATGGAAGGCATGAAGAAGAAGAAAGATGGTTCTGATTGTGGACCTCTAATTGCAGAGCCTGAGCTCATGACAACAAAACTAACAGAAGAGGATGAGTTCCTTATAATTGGGTGTGACGGGGTTTGGGATGTGTTCATGAGCCAGAATGCTGTAGATTTTGCCAGAAGGAGACTACAGGAGCACAATGACCCGGTCATGTGTAGTAAGGAGCTGGTTGAGGAAGCTTTGAAGAGGAAGAGTGCTGATAATGTGACGGCAGTGGTTGTGTGTCTTCAGCCACAGCCACCACCGAACTTGGTAGCGCCGAGGTTGAGAGTTCACAGAAGCTTCTCGGCGGAGGGTTTAAAAGATTTACAGAGCTACTTGGATGGCTTGGGAAACTAA - >AT2G25620.1
ATGGAAGAAACTAGAGGAATTTCTGATCCAGAGAATGGGAGTTCGAGTTACGGCGGTAAACCGCCGAATCCACTCTCCTTCTCTTCTTCCTCCGCCGCTGCTGCCGTTTACAGGCAAACCTTCGACGGCGAGCGATCGTTGGCGCCGTGTAATAAGAGGTCACTGGTTCGACACTCATCTCTCGTGAAGACAATGGTGTCAGATATATCTGTTGAGAATGAGTTTACTATAGAGAAGAACAAGTCTGAGTTTGTTCCTGCTACGCGTTCTGGAGCTTGGTCTGATATTGGCTCCAGGTCAAGCATGGAAGATGCTTATCTATGCGTTGATAATTTCATGGATAGCTTTGGCCTTCTGAATTCTGAGGCTGGTCCAAGTGCCTTCTATGGGGTATTTGATGGACATGGTGGGAAGCATGCCGCTGAGTTTGCATGTCACCATATACCGAGGTACATTGTTGAAGATCAAGAGTTTCCTAGTGAAATCAATAAGGTGTTATCTTCAGCATTTCTTCAAACAGACACTGCCTTCTTAGAGGCGTGTTCATTGGATGGGAGCCTTGCTTCAGGAACTACTGCTTTGGCAGCTATTCTTTTTGGAAGGTCGTTGGTGGTAGCAAACGCTGGAGATTGCAGAGCAGTCTTATCCCGTCAGGGAAAAGCCATTGAAATGTCAAGAGACCACAAACCCATGAGCAGTAAGGAAAGGAGACGCATTGAAGCATCGGGTGGACATGTATTCGATGGCTATCTAAATGGACAACTTAATGTGGCTCGAGCGCTAGGTGACTTTCATATGGAAGGCATGAAGAAGAAGAAAGATGGTTCTGATTGTGGACCTCTAATTGCAGAGCCTGAGCTCATGACAACAAAACTAACAGAAGAGGATGAGTTCCTTATAATTGGGTGTGACGGGGTTTGGGATGTGTTCATGAGCCAGAATGCTGTAGATTTTGCCAGAAGGAGACTACAGGAGCACAATGACCCGGTCATGTGTAGTAAGGAGCTGGTTGAGGAAGCTTTGAAGAGGAAGAGTGCTGATAATGTGACGGCAGTGGTTGTGTGTCTTCAGCCACAGCCACCACCGAACTTGGTAGCGCCGAGGTTGAGAGTTCACAGAAGCTTCTCGGCGGAGGGTTTAAAAGATTTACAGAGCTACTTGGATGGCTTGGGAAACTAA
Protein Sequence
- >AT2G25620.2
MEETRGISDPENGSSSYGGKPPNPLSFSSSSAAAAVYRQTFDGERSLAPCNKRSLVRHSSLVKTMVSDISVENEFTIEKNKSEFVPATRSGAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKELVEEALKRKSADNVTAVVVCLQPQPPPNLVAPRLRVHRSFSAEGLKDLQSYLDGLGN - >AT2G25620.1
MEETRGISDPENGSSSYGGKPPNPLSFSSSSAAAAVYRQTFDGERSLAPCNKRSLVRHSSLVKTMVSDISVENEFTIEKNKSEFVPATRSGAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPLIAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQEHNDPVMCSKELVEEALKRKSADNVTAVVVCLQPQPPPNLVAPRLRVHRSFSAEGLKDLQSYLDGLGN