Information report for AT1G06850
Gene Details
|
|
Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0031490 — enables — chromatin DNA binding
- GO:0005634 — located in — nucleus
- GO:0010817 — acts upstream of or within — regulation of hormone levels
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005634 — is active in — nucleus
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005829 — located in — cytosol
- GO:0048468 — acts upstream of or within — cell development
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0000902 — acts upstream of or within — cell morphogenesis
- GO:0006996 — acts upstream of or within — organelle organization
- GO:0065008 — acts upstream of or within — regulation of biological quality
- GO:0044281 — acts upstream of or within — small molecule metabolic process
- GO:0071669 — acts upstream of or within — plant-type cell wall organization or biogenesis
- GO:0022607 — acts upstream of or within — cellular component assembly
- GO:0005515 — enables — protein binding
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0005737 — located in — cytoplasm
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , pollen tube cell , guard cell
Literature and News
- Secondary metabolites or physiologically important superlipids? DOI: 10.1016/j.bbrc.2011.03.059 ; PMID: 21419101
- cis-Prenyltransferase and Polymer Analysis from a Natural Rubber Perspective. DOI: 10.1016/bs.mie.2016.02.026 ; PMID: 27480685
- Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana. DOI: 10.3390/molecules24152789 ; PMID: 31370240
- cis-prenyltransferase 3 and α/β-hydrolase are new determinants of dolichol accumulation in Arabidopsis. DOI: 10.1111/pce.14223 ; PMID: 34778961
- The Arabidopsis mediator complex subunits MED16, MED14, and MED2 regulate mediator and RNA polymerase II recruitment to CBF-responsive cold-regulated genes. DOI: 10.1105/tpc.113.117796 ; PMID: 24415770
- Redox regulation of the MED28 and MED32 mediator subunits is important for development and senescence. DOI: 10.1007/s00709-015-0853-y ; PMID: 26195288
- Biochemical and redox characterization of the mediator complex and its associated transcription factor GeBPL, a GLABROUS1 enhancer binding protein. DOI: 10.1042/BJ20150132 ; PMID: 25877331
- Mediator Complex Subunits MED2, MED5, MED16, and MED23 Genetically Interact in the Regulation of Phenylpropanoid Biosynthesis. DOI: 10.1105/tpc.17.00282 ; PMID: 29203634
- Transcriptome Analysis of Four Arabidopsis thaliana Mediator Tail Mutants Reveals Overlapping and Unique Functions in Gene Regulation. DOI: 10.1534/g3.118.200573 ; PMID: 30049745
- Papillae formation on Arabidopsis leaf trichomes requires the function of Mediator tail subunits 2, 14, 15a, 16, and 25. DOI: 10.1007/s00425-018-3063-y ; PMID: 30535640
- Interaction map of Arabidopsis Mediator complex expounding its topology. DOI: 10.1093/nar/gkz122 ; PMID: 30793213
- Mediator Subunits MED16, MED14, and MED2 Are Required for Activation of ABRE-Dependent Transcription in Arabidopsis. DOI: 10.3389/fpls.2021.649720 ; PMID: 33777083
- Effect of sulfur availability on the integrity of amino acid biosynthesis in plants. DOI: 10.1007/s00726-005-0251-4 ; PMID: 16552493
- Arogenate Dehydratase Isoforms Differentially Regulate Anthocyanin Biosynthesis in Arabidopsis thaliana. DOI: 10.1016/j.molp.2016.09.010 ; PMID: 27720844
- The repair of topoisomerase 2 cleavage complexes in Arabidopsis. DOI: 10.1093/plcell/koab228 ; PMID: 34524446
- SMC5/6 complex-mediated SUMOylation stimulates DNA-protein cross-link repair in Arabidopsis. DOI: 10.1093/plcell/koad020 ; PMID: 36705512
- Paternally expressed imprinted genes establish postzygotic hybridization barriers in Arabidopsis thaliana. DOI: 10.7554/eLife.10074 ; PMID: 26344545
- The Plasmodesmata-Located β-1,3-Glucanase Enzyme PdBG4 Regulates Trichomes Growth in Arabidopsis thaliana. DOI: 10.3390/cells11182856 ; PMID: 36139431
- The Arabidopsis transcription factor MYB77 modulates auxin signal transduction. DOI: 10.1105/tpc.107.050963 ; PMID: 17675404
Gene Resources
- UniProt: F4HNU1
- EMBL: CP002684
- AlphaFoldDB: F4HNU1
- EnsemblPlants: AT1G06850.2
- Gramene: AT1G06850.2
- KEGG: ath:AT1G06850
- ExpressionAtlas: AT1G06850
- InterPro: IPR004827, IPR044759, IPR046347
- PANTHER: PTHR13690, PTHR13690:SF122
- SUPFAM: SSF57959
- PROSITE: PS50217
- Gene3D: 1.20.5.170
- SWISS-MODEL: F4HNU1
- Conserved Domain Database: cd14703
Homologs
- Brassica napus GSBRNA2T00089773001, GSBRNA2T00031724001, GSBRNA2T00122144001, GSBRNA2T00145119001
- Brassica oleracea XP_013602256.1, XP_013602035.1
- Brassica rapa XP_009110972.1, XP_009118474.1
- Cicer arietinum XP_004500364.1
- Glycine max Glyma.18G052500.1.p
- Raphanus raphanistrum RrC13382_p1, RrC723_p1
Sequences
cDNA Sequence
- >AT1G06850.2
CTCCTACGCTCTTCATTTCATTTCATTTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGCTTCGTCTTCTTCATCTCCATCATTATCTCCATTGACATTGTTCTCAATTGCGAATAATAATCATAATTATTCACACAACCAAAGCATTCATCTCTCAGATTCTCTTAAAAAAATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCTTCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGACGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCTAATCCTCCTCCTCCTCCTTCCTCTCGTCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGAAAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGAGAGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGGTTTCCATATTCGGCGATTCCTCGTTTGATCCCAACAGAATAGGAAAGTTCTTTCCTCTGTTTTACATACATAGACAGATCTTGATTTCAATGTTGTTTTGA - >AT1G06850.1
CTCCTACGCTCTTCATTTCATTTCATTTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGCTTCGTCTTCTTCATCTCCATCATTATCTCCATTGACATTGTTCTCAATTGCGAATAATAATCATAATTATTCACACAACCAAAGCATTCATCTCTCAGATTCTCTTAAAAAAATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCTTCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGACGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCTAATCCTCCTCCTCCTCCTTCCTCTCGTCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGAAAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGAGAGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGGTTTCCATATTCGGCGATTCCTCGTTTGATCCCAACAGAATAGGAAAGTTCTTTCCTCTGTTTTACATACATAGACAGATCTTGATTTCAATGTTGTTTTGA
CDS Sequence
- >AT1G06850.2
ATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCTTCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGACGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCTAATCCTCCTCCTCCTCCTTCCTCTCGTCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGAAAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGAGAGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGGTTTCCATATTCGGCGATTCCTCGTTTGATCCCAACAGAATAGGAAAGTTCTTTCCTCTGTTTTACATACATAGACAGATCTTGATTTCAATGTTGTTTTGA - >AT1G06850.1
ATGGAGAAATCAGATCCTCCACCAGTCCCAAAGCCCGGCGCCACTATTATCCCCTCCTCCGATCCAATTCCTAATGCCGATCCGATTCCATCTTCTTCCTTCCACCGCCGATCTCGCTCCGACGATATGTCCATGTTCATGTTCATGGATCCCCTCTCCTCCGCCGCACCACCTTCCTCCGACGACCTTCCCTCCGACGACGATCTCTTCTCTTCTTTCATCGATGTCGATAGCCTCACCTCTAATCCCAATCCCTTTCAAAATCCTTCCCTCTCCTCCAACTCCGTTTCCGGCGCTGCTAATCCTCCTCCTCCTCCTTCCTCTCGTCCTCGCCACCGTCACAGCAATTCCGTTGACGCTGGATGCGCCATGTATGCCGGTGATATCATGGACGCTAAGAAAGCTATGCCTCCTGAAAAACTCTCTGAGCTTTGGAACATCGATCCCAAACGCGCCAAAAGGATTCTAGCGAATCGACAATCTGCAGCTCGATCCAAAGAGAGAAAAGCTCGATACATTCAAGAACTTGAGCGCAAAGTTCAATCTCTTCAAACCGAAGCTACCACTCTCTCTGCTCAGCTTACTCTCTACCAGGTTTCCATATTCGGCGATTCCTCGTTTGATCCCAACAGAATAGGAAAGTTCTTTCCTCTGTTTTACATACATAGACAGATCTTGATTTCAATGTTGTTTTGA
Protein Sequence
- >AT1G06850.2
MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAANPPPPPSSRPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQVSIFGDSSFDPNRIGKFFPLFYIHRQILISMLF - >AT1G06850.1
MEKSDPPPVPKPGATIIPSSDPIPNADPIPSSSFHRRSRSDDMSMFMFMDPLSSAAPPSSDDLPSDDDLFSSFIDVDSLTSNPNPFQNPSLSSNSVSGAANPPPPPSSRPRHRHSNSVDAGCAMYAGDIMDAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTLSAQLTLYQVSIFGDSSFDPNRIGKFFPLFYIHRQILISMLF