Information report for AT1G06760
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0071695 — acts upstream of or within — anatomical structure maturation
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0031492 — enables — nucleosomal DNA binding
- GO:0050793 — acts upstream of or within — regulation of developmental process
- GO:0048588 — acts upstream of or within — developmental cell growth
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0009888 — acts upstream of or within — tissue development
- GO:0019219 — acts upstream of or within — regulation of nucleobase-containing compound metabolic process
- GO:0006334 — involved in — nucleosome assembly
- GO:0045910 — involved in — negative regulation of DNA recombination
- GO:0003690 — enables — double-stranded DNA binding
- GO:0005634 — is active in — nucleus
- GO:0030527 — enables — structural constituent of chromatin
- GO:0005634 — located in — nucleus
- GO:0000786 — part of — nucleosome
- GO:0010468 — acts upstream of or within — regulation of gene expression
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , plant sperm cell , guard cell
Literature and News
- Phosphorylation of plastoglobular proteins in Arabidopsis thaliana. DOI: 10.1093/jxb/erw091 ; PMID: 26962209
- ABC1K10a, an atypical kinase, functions in plant salt stress tolerance. DOI: 10.1186/s12870-020-02467-4 ; PMID: 32522160
- Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants. DOI: 10.1073/pnas.1202452109 ; PMID: 22411807
- Tetrapyrrole biosynthetic enzyme protoporphyrinogen IX oxidase 1 is required for plastid RNA editing. DOI: 10.1073/pnas.1316183111 ; PMID: 24497494
- and heteromer interactions between the multiple organellar RNA editing factor (MORF) proteins in Arabidopsis thaliana. DOI: 10.1074/jbc.M114.602086 ; PMID: 25583991
- A zinc finger motif-containing protein is essential for chloroplast RNA editing. DOI: 10.1371/journal.pgen.1005028 ; PMID: 25768119
- MEF13 Requires MORF3 and MORF8 for RNA Editing at Eight Targets in Mitochondrial mRNAs in Arabidopsis thaliana. DOI: 10.1016/j.molp.2015.05.008 ; PMID: 26048647
- PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana. DOI: 10.1007/s11120-015-0171-4 ; PMID: 26123918
- An Organelle RNA Recognition Motif Protein Is Required for Photosystem II Subunit psbF Transcript Editing. DOI: 10.1104/pp.16.01623 ; PMID: 28213559
- Crystal structures of the Arabidopsis thaliana organellar RNA editing factors MORF1 and MORF9. DOI: 10.1093/nar/gkx099 ; PMID: 28201607
- RNA editing of cytochrome c maturation transcripts is responsive to the energy status of leaf cells in Arabidopsis thaliana. DOI: 10.1016/j.mito.2017.04.006 ; PMID: 28478183
- A novel tetratricopeptide repeat protein, WHITE TO GREEN1, is required for early chloroplast development and affects RNA editing in chloroplasts. DOI: 10.1093/jxb/erx383 ; PMID: 29140512
- Crystal structure of the chloroplast RNA editing factor MORF2. DOI: 10.1016/j.bbrc.2017.12.044 ; PMID: 29229384
Gene Resources
- UniProt: A0A178W387
- EMBL: CACRSJ010000104, LUHQ01000001
- AlphaFoldDB: A0A178W387
- EnsemblPlants: AT1G06760.1
- Gramene: AT1G06760.1
- KEGG: ath:AT1G06760
- Orthologous matrix: IKNHYKV
- ExpressionAtlas: AT1G06760
- InterPro: IPR005818, IPR005819, IPR036388
- PANTHER: PTHR11467, PTHR11467:SF168
- SUPFAM: SSF46785
- PROSITE: PS51504
- Gene3D: 1.10.10.10
- SWISS-MODEL: A0A178W387
- Conserved Domain Database: cd00073
Homologs
- Actinidia chinensis Achn115281
- Oryza sativa OsATH1
- Solanum lycopersicum Solyc03g121840.2.1
- Solanum tuberosum PGSC0003DMP400004400
- Ziziphus jujuba XP_015890673.1
Sequences
cDNA Sequence
- >AT1G06760.1
CAGAAGCCAGATATGAATTGCCGTCTAATACACATCTAACTATATAAATCGGACGTTTCCAATGATCCTCTTCACAATCCTCATAATCACTTTCGAAATTACATTTACGCTTTCTTGCAATCAAATTTTCCGATCTTAAGTTCAGAAGACGATGTCAGAGGTGGAAATAGAGAACGCTGCTACGATCGAAGGAAACACCGCTGCGGATGCGCCGGTGACGGATGCGGCCGTTGAGAAGAAGCCTGCAGCGAAAGGACGAAAGACGAAGAATGTTAAGGAAGTGAAGGAGAAGAAGACTGTTGCTGCCGCTCCGAAGAAGAGAACTGTTTCATCTCATCCTACTTACGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAAGAGAGAACTGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCGTAAGGAGCTTCCTCCAACATTCAGAAAGCTGTTGCTTCTCAATCTGAAGAGACTCGTTGCTTCTGGGAAGCTTGTGAAGGTCAAAGCCTCGTTTAAACTCCCATCGGCGTCGGCTAAAGCATCATCCCCTAAGGCGGCAGCGGAGAAATCTGCTCCTGCGAAGAAGAAACCGGCGACTGTGGCGGTTACCAAGGCGAAGAGAAAGGTCGCTGCGGCTTCCAAGGCTAAGAAAACAATCGCCGTTAAACCTAAGACTGCTGCTGCTAAGAAAGTGACCGCGAAGGCTAAGGCTAAGCCCGTTCCTCGTGCCACTGCTGCTGCAACTAAGAGGAAAGCTGTTGATGCGAAGCCCAAGGCTAAGGCTAGACCAGCCAAGGCAGCCAAAACGGCCAAGGTTACATCTCCGGCTAAGAAAGCTGTTGCTGCCACGAAGAAAGTTGCTACGGTGGCCACAAAGAAGAAGACTCCGGTTAAGAAGGTTGTGAAGCCAAAGACGGTTAAGTCTCCAGCAAAGAGGGCTTCTTCTAGGGTTAAGAAGTGAAGTTAGGGTTTGTAGGTAGAAGAATGGTTAACGATAGTTTAGACTTGTATAATTCAATCATCTTTATGCGACTTTGTTTGCTTTTCTTCTTTCAGTGTTCTTGTTATTCACAGTTCCTTTGGACTACCCCTTAAATCATATATAGATTTCATCAATGAAGCAAACTCGAGTTTCTTTGCAGCT
CDS Sequence
- >AT1G06760.1
ATGTCAGAGGTGGAAATAGAGAACGCTGCTACGATCGAAGGAAACACCGCTGCGGATGCGCCGGTGACGGATGCGGCCGTTGAGAAGAAGCCTGCAGCGAAAGGACGAAAGACGAAGAATGTTAAGGAAGTGAAGGAGAAGAAGACTGTTGCTGCCGCTCCGAAGAAGAGAACTGTTTCATCTCATCCTACTTACGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAAGAGAGAACTGGATCTAGCCAATACGCGATTCAGAAGTTCATCGAGGAGAAGCGTAAGGAGCTTCCTCCAACATTCAGAAAGCTGTTGCTTCTCAATCTGAAGAGACTCGTTGCTTCTGGGAAGCTTGTGAAGGTCAAAGCCTCGTTTAAACTCCCATCGGCGTCGGCTAAAGCATCATCCCCTAAGGCGGCAGCGGAGAAATCTGCTCCTGCGAAGAAGAAACCGGCGACTGTGGCGGTTACCAAGGCGAAGAGAAAGGTCGCTGCGGCTTCCAAGGCTAAGAAAACAATCGCCGTTAAACCTAAGACTGCTGCTGCTAAGAAAGTGACCGCGAAGGCTAAGGCTAAGCCCGTTCCTCGTGCCACTGCTGCTGCAACTAAGAGGAAAGCTGTTGATGCGAAGCCCAAGGCTAAGGCTAGACCAGCCAAGGCAGCCAAAACGGCCAAGGTTACATCTCCGGCTAAGAAAGCTGTTGCTGCCACGAAGAAAGTTGCTACGGTGGCCACAAAGAAGAAGACTCCGGTTAAGAAGGTTGTGAAGCCAAAGACGGTTAAGTCTCCAGCAAAGAGGGCTTCTTCTAGGGTTAAGAAGTGA
Protein Sequence
- >AT1G06760.1
MSEVEIENAATIEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKKTPVKKVVKPKTVKSPAKRASSRVKK