Information report for AT1G06080
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- cauline leaf , seed , petal , stem
Literature and News
- The SnRK2 kinases modulate miRNA accumulation in Arabidopsis. DOI: 10.1371/journal.pgen.1006753 ; PMID: 28419088
- The Protein Phosphatase 4 and SMEK1 Complex Dephosphorylates HYL1 to Promote miRNA Biogenesis by Antagonizing the MAPK Cascade in Arabidopsis. DOI: 10.1016/j.devcel.2017.05.008 ; PMID: 28586645
- Rice stripe virus NS3 protein regulates primary miRNA processing through association with the miRNA biogenesis factor OsDRB1 and facilitates virus infection in rice. DOI: 10.1371/journal.ppat.1006662 ; PMID: 28977024
- UV-B radiation delays flowering time through changes in the PRC2 complex activity and miR156 levels in Arabidopsis thaliana. DOI: 10.1111/pce.13166 ; PMID: 29447428
- A Quick HYL1-Dependent Reactivation of MicroRNA Production Is Required for a Proper Developmental Response after Extended Periods of Light Deprivation. DOI: 10.1016/j.devcel.2018.06.014 ; PMID: 30016624
- The PROTEIN PHOSPHATASE4 Complex Promotes Transcription and Processing of Primary microRNAs in Arabidopsis. DOI: 10.1105/tpc.18.00556 ; PMID: 30674692
- The analogous and opposing roles of double-stranded RNA-binding proteins in bacterial resistance. DOI: 10.1093/jxb/erz019 ; PMID: 30843586
- DRB1, DRB2 and DRB4 Are Required for Appropriate Regulation of the microRNA399/PHOSPHATE2 Expression Module in Arabidopsis thaliana. DOI: 10.3390/plants8050124 ; PMID: 31086001
- Deficiency in the double-stranded RNA binding protein HYPONASTIC LEAVES1 increases sensitivity to the endoplasmic reticulum stress inducer tunicamycin in Arabidopsis. DOI: 10.1186/s13104-019-4623-3 ; PMID: 31521187
Gene Resources
Sequences
cDNA Sequence
- >AT1G06080.1
TAGAGAATAAATTACGGCGTCCGTTAGTAAGTCAATTCACTCTATTCAATTTTTTACCCTCCATGCTACTATAAATTACAACGATACTCACTCACAAAACCTAAACCACTATAACACTCTTTATACAAACTTCAAATCCACAAAGAGTCTTTTTTTTTTTTTCTCTTCGACTTAGCTTATACATAGTTTTATTACAAGATGTCATTGTCAGCCTCGGAGAAGGAGGAGAATAACAAGAAAATGGCAGCGGACAAGGCTGAGATGGGGAGGAAGAAGAGGGCAATGTGGGAAAGAAAGTGGAAGAGATTGGACATTGTGAAAGCTTTTGCATCTCTCTTTGTCCATTTCCTCTGTCTCTTGGCGCCTTTCAATTTCACTTGGCCGGCTTTAAGAGTCGCCCTCATTGTCTATACGGTGGGTGGGCTCGGTATCACCGTCTCTTACCACCGAAATTTGGCTCACCGGAGCTTCAAAGTCCCTAAATGGCTCGAGTATTTCTTCGCTTATTGCGGCCTTCTTGCCATTCAGGGAGATCCGATTGATTGGGTGAGCACACATCGATACCATCACCAGTTTACAGATTCGGATAGGGACCCACATAGTCCTAACGAAGGATTTTGGTTCAGTCACCTCCTATGGCTATTTGATACCGGTTATCTTGTAGAAAAGTGTGGAAGAAGGACAAATGTGGAGGACTTAAAGAGGCAGTGGTACTATAAATTCCTCCAAAGAACAGTCCTTTACCACATTCTAACATTTGGTTTCCTCCTCTATTACTTTGGTGGTTTGTCTTTTCTTACTTGGGGAATGGGTATTGGGGTAGCAATGGAGCATCATGTGACTTGCCTCATAAACTCTCTTTGCCATGTTTGGGGAAGCCGAACTTGGAAGACTAATGACACTTCCCGTAACGTTTGGTGGCTATCAGTATTCTCGTTTGGAGAGAGCTGGCACAACAATCACCACGCCTTCGAATCCTCGGCGAGACAAGGCTTAGAATGGTGGCAAATCGACATTTCTTGGTATATTGTCCGCTTTCTCGAGATTATCGGTTTGGCTACTGATGTTAAGTTGCCTTCCGAGAGTCAACGTCGTCGTATGGCAATGGTTCGTTGAAGATATGGAACGACGTCTCGTCTCATTTAAGCATTAGTTAATTAATGTCTACGTACGTTTTAAGTTTTTGGTAAACGTAACACTTGTAATATTGTGCGATGCGGTGTTGTTTTGTGACTTGTGGTGTGTGTTTGAACCAACTTGCTTAATTAAGATAACGTTCGTTTTGATATGAGCGAAATTTTAAAATGCGTTATGAAGTTTATCAATCACGGCCC - >AT1G06080.2
TAGAGAATAAATTACGGCGTCCGTTAGTAAGTCAATTCACTCTATTCAATTTTTTACCCTCCATGCTACTATAAATTACAACGATACTCACTCACAAAACCTAAACCACTATAACACTCTTTATACAAACTTCAAATCCACAAAGAGTCTTTTTTTTTTTTTCTCTTCGACTTAGCTTATACATAGTTTTATTACAAGATGTCATTGTCAGCCTCGGAGAAGGAGGAGAATAACAAGAAAATGGCAGCGGACAAGGCTGAGATGGGGAGGAAGAAGAGGGCAATGTGGGAAAGAAAGTGGAAGAGATTGGACATTGTGAAAGCTTTTGCATCTCTCTTTGTCCATTTCCTCTGTCTCTTGGCGCCTTTCAATTTCACTTGGCCGGCTTTAAGAGTCGCCCTCATTGTCTATACGGTGGGTGGGCTCGGTATCACCGTCTCTTACCACCGAAATTTGGCTCACCGGAGCTTCAAAGTCCCTAAATGGCTCGAGTATTTCTTCGCTTATTGCGGCCTTCTTGCCATTCAGGGAGATCCGATTGATTGGGTGAGCACACATCGATACCATCACCAGTTTACAGATTCGGATAGGGACCCACATAGTCCTAACGAAGGATTTTGGTTCAGTCACCTCCTATGGCTATTTGATACCGGTTATCTTGTAGAAAAGTGTGGAAGAAGGACAAATGTGGAGGACTTAAAGAGGCAGTGGTACTATAAATTCCTCCAAAGAACAGTCCTTTACCACATTCTAACATTTGGTTTCCTCCTCTATTACTTTGGTGGTTTGTCTTTTCTTACTTGGGGAATGGGTATTGGGGTAGCAATGGAGCATCATGTGACTTGCCTCATAAACTCTCTTTGCCATGTTTGGGGAAGCCGAACTTGGAAGACTAATGACACTTCCCGTAACGTTTGGTGGCTATCAGTATTCTCGTTTGGAGAGAGCTGGCACAACAATCACCACGCCTTCGAATCCTCGGCGAGACAAGGCTTAGAATGGTGGCAAATCGACATTTCTTGGTATATTGTCCGCTTTCTCGAGATTATCGGTTTGGCTACTGATGTTAAGTTGCCTTCCGAGAGTCAACGTCGTCGTATGGCAATGGTTCGTTGAAGATATGGAACGACGTCTCGTCTCATTTAAGCATTAGTTAATTAATGTCTACGTACGTTTTAAGTTTTTGGTAAACGTAACACTTGTAATATTGTGCGATGCGGTGTTGTTTTGTGACTTGTGGTGTGTGTTTGAACCAACTTGCTTAATTAAGATAACGTTCGTTTTGATATGAGCGAAATTTTAAAATGCGTTATGAAGTTTATCAATCACGGCCC
CDS Sequence
- >AT1G06080.1
ATGTCATTGTCAGCCTCGGAGAAGGAGGAGAATAACAAGAAAATGGCAGCGGACAAGGCTGAGATGGGGAGGAAGAAGAGGGCAATGTGGGAAAGAAAGTGGAAGAGATTGGACATTGTGAAAGCTTTTGCATCTCTCTTTGTCCATTTCCTCTGTCTCTTGGCGCCTTTCAATTTCACTTGGCCGGCTTTAAGAGTCGCCCTCATTGTCTATACGGTGGGTGGGCTCGGTATCACCGTCTCTTACCACCGAAATTTGGCTCACCGGAGCTTCAAAGTCCCTAAATGGCTCGAGTATTTCTTCGCTTATTGCGGCCTTCTTGCCATTCAGGGAGATCCGATTGATTGGGTGAGCACACATCGATACCATCACCAGTTTACAGATTCGGATAGGGACCCACATAGTCCTAACGAAGGATTTTGGTTCAGTCACCTCCTATGGCTATTTGATACCGGTTATCTTGTAGAAAAGTGTGGAAGAAGGACAAATGTGGAGGACTTAAAGAGGCAGTGGTACTATAAATTCCTCCAAAGAACAGTCCTTTACCACATTCTAACATTTGGTTTCCTCCTCTATTACTTTGGTGGTTTGTCTTTTCTTACTTGGGGAATGGGTATTGGGGTAGCAATGGAGCATCATGTGACTTGCCTCATAAACTCTCTTTGCCATGTTTGGGGAAGCCGAACTTGGAAGACTAATGACACTTCCCGTAACGTTTGGTGGCTATCAGTATTCTCGTTTGGAGAGAGCTGGCACAACAATCACCACGCCTTCGAATCCTCGGCGAGACAAGGCTTAGAATGGTGGCAAATCGACATTTCTTGGTATATTGTCCGCTTTCTCGAGATTATCGGTTTGGCTACTGATGTTAAGTTGCCTTCCGAGAGTCAACGTCGTCGTATGGCAATGGTTCGTTGA - >AT1G06080.2
ATGTCATTGTCAGCCTCGGAGAAGGAGGAGAATAACAAGAAAATGGCAGCGGACAAGGCTGAGATGGGGAGGAAGAAGAGGGCAATGTGGGAAAGAAAGTGGAAGAGATTGGACATTGTGAAAGCTTTTGCATCTCTCTTTGTCCATTTCCTCTGTCTCTTGGCGCCTTTCAATTTCACTTGGCCGGCTTTAAGAGTCGCCCTCATTGTCTATACGGTGGGTGGGCTCGGTATCACCGTCTCTTACCACCGAAATTTGGCTCACCGGAGCTTCAAAGTCCCTAAATGGCTCGAGTATTTCTTCGCTTATTGCGGCCTTCTTGCCATTCAGGGAGATCCGATTGATTGGGTGAGCACACATCGATACCATCACCAGTTTACAGATTCGGATAGGGACCCACATAGTCCTAACGAAGGATTTTGGTTCAGTCACCTCCTATGGCTATTTGATACCGGTTATCTTGTAGAAAAGTGTGGAAGAAGGACAAATGTGGAGGACTTAAAGAGGCAGTGGTACTATAAATTCCTCCAAAGAACAGTCCTTTACCACATTCTAACATTTGGTTTCCTCCTCTATTACTTTGGTGGTTTGTCTTTTCTTACTTGGGGAATGGGTATTGGGGTAGCAATGGAGCATCATGTGACTTGCCTCATAAACTCTCTTTGCCATGTTTGGGGAAGCCGAACTTGGAAGACTAATGACACTTCCCGTAACGTTTGGTGGCTATCAGTATTCTCGTTTGGAGAGAGCTGGCACAACAATCACCACGCCTTCGAATCCTCGGCGAGACAAGGCTTAGAATGGTGGCAAATCGACATTTCTTGGTATATTGTCCGCTTTCTCGAGATTATCGGTTTGGCTACTGATGTTAAGTTGCCTTCCGAGAGTCAACGTCGTCGTATGGCAATGGTTCGTTGA
Protein Sequence
- >AT1G06080.1
MSLSASEKEENNKKMAADKAEMGRKKRAMWERKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVLYHILTFGFLLYYFGGLSFLTWGMGIGVAMEHHVTCLINSLCHVWGSRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRMAMVR - >AT1G06080.2
MSLSASEKEENNKKMAADKAEMGRKKRAMWERKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVLYHILTFGFLLYYFGGLSFLTWGMGIGVAMEHHVTCLINSLCHVWGSRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFLEIIGLATDVKLPSESQRRRMAMVR