Gene Details:

• Gene ID: AT1G06040
• Gene Symbol: BBX24, STO
• Gene Name: B-box domain protein 24, SALT TOLERANCE
• Description: B-box zinc finger family protein;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G06040.1     AT1G06040.2

Plant Ontology Annotations:

• PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
• PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Function-related keywords:

• cauline leaf ,  inflorescence meristem ,  seed ,  carpel ,  petal ,  stem ,  pollen ,  plant sperm cell ,  guard cell

Literature:

• Phytochrome A Mediates Blue-Light Enhancement of Second-Positive Phototropism in Arabidopsis.   DOI:  10.3389/fpls.2016.00290 ;  PMID:  27014313
• Characterization of photomorphogenic responses and signaling cascades controlled by phytochrome-A expressed in different tissues.   DOI:  10.1111/nph.13941 ;  PMID:  27027866
• Accumulation of TIP2;2 Aquaporin during Dark Adaptation Is Partially PhyA Dependent in Roots of Arabidopsis Seedlings.   DOI:  10.3390/plants3010177 ;  PMID:  27135499
• Arabidopsis COGWHEEL1 links light perception and gibberellins with seed tolerance to deterioration.   DOI:  10.1111/tpj.13220 ;  PMID:  27227784
• A novel blue-light phototropic response is revealed in roots of Arabidopsis thaliana in microgravity.   DOI:  10.1007/s00425-016-2581-8 ;  PMID:  27507239
• A Protein-Based Genetic Screening Uncovers Mutants Involved in Phytochrome Signaling in Arabidopsis.   DOI:  10.3389/fpls.2016.01086 ;  PMID:  27499759
• Photochemical activity and the structure of chloroplasts in Arabidopsis thaliana L. mutants deficient in phytochrome A and B.   DOI:  10.1007/s00709-016-1020-9 ;  PMID:  27586644
• Shedding (far-red) light on phytochrome mechanisms and responses in land plants.   DOI:  10.1016/j.plantsci.2013.11.013 ;  PMID:  24467894
• Expression of recombinant full-length plant phytochromes assembled with phytochromobilin in Pichia pastoris.   DOI:  10.1016/j.febslet.2014.05.050 ;  PMID:  24911206
• Photoreceptor partner FHY1 has an independent role in gene modulation and plant development under far-red light.   DOI:  10.1073/pnas.1412528111 ;  PMID:  25071219
• Phytochrome A antagonizes PHYTOCHROME INTERACTING FACTOR 1 to prevent over-activation of photomorphogenesis.   DOI:  10.1093/mp/ssu078 ;  PMID:  25009301
• A laboratory simulation of Arabidopsis seed dormancy cycling provides new insight into its regulation by clock genes and the dormancy-related genes DOG1, MFT, CIPK23 and PHYA.   DOI:  10.1111/pce.12940 ;  PMID:  28240777
• Resistance of Arabidopsis thaliana L. photosynthetic apparatus to UV-B is reduced by deficit of phytochromes B and A.   DOI:  10.1016/j.jphotobiol.2017.02.024 ;  PMID:  28273503
• Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis.   DOI:  10.1016/j.molp.2017.04.008 ;  PMID:  28461270
• Phytochrome A and B Regulate Primary Metabolism in Arabidopsis Leaves in Response to Light.   DOI:  10.3389/fpls.2017.01394 ;  PMID:  28848593
• Biological activity and dimerization state of modified phytochrome A proteins.   DOI:  10.1371/journal.pone.0186468 ;  PMID:  29049346
• FAR-RED INSENSITIVE 219/JAR1 Contributes to Shade Avoidance Responses of Arabidopsis Seedlings by Modulating Key Shade Signaling Components.   DOI:  10.3389/fpls.2017.01901 ;  PMID:  29163619
• The combined effects of real or simulated microgravity and red-light photoactivation on plant root meristematic cells.   DOI:  10.1007/s00425-018-2930-x ;  PMID:  29948124
• Red Light-Induced Phosphorylation of Plasma Membrane H(+)-ATPase in Stomatal Guard Cells.   DOI:  10.1104/pp.18.00544 ;  PMID:  30104254
• Antagonistic Roles of PhyA and PhyB in Far-Red Light-Dependent Leaf Senescence in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcy153 ;  PMID:  30099525
• Arabidopsis phytochrome A nuclear translocation is mediated by a far-red elongated hypocotyl 1-importin complex.   DOI:  10.1111/tpj.14107 ;  PMID:  30256472
• Dawn and photoperiod sensing by phytochrome A.   DOI:  10.1073/pnas.1803398115 ;  PMID:  30254157
• Molecular basis of flowering under natural long-day conditions in Arabidopsis.   DOI:  10.1038/s41477-018-0253-3 ;  PMID:  30250277
• TOR and RPS6 transmit light signals to enhance protein translation in deetiolating Arabidopsis seedlings.   DOI:  10.1073/pnas.1809526115 ;  PMID:  30482859
• Hinge region of Arabidopsis phyA plays an important role in regulating phyA function.   DOI:  10.1073/pnas.1813162115 ;  PMID:  30478060
• The dephosphorylated S8A and S18A mutants of (oat) phytochrome A comprise its two species, phyA' and phyA'', suggesting that autophosphorylation at these sites is not involved in the phyA differentiation.   DOI:  10.1039/c8pp00574e ;  PMID:  30864573
• Uncovering the molecular signature underlying the light intensity-dependent root development in Arabidopsis thaliana.   DOI:  10.1186/s12864-019-5933-5 ;  PMID:  31325959
• Regulation of Sugar and Storage Oil Metabolism by Phytochrome during De-etiolation.   DOI:  10.1104/pp.19.00535 ;  PMID:  31748417
• ABA INSENSITIVE4 promotes rather than represses PHYA-dependent seed germination in Arabidopsis thaliana.   DOI:  10.1111/nph.16363 ;  PMID:  31828800
• Nuclear-encoded sigma factor 6 (SIG6) is involved in the block of greening response in Arabidopsis thaliana.   DOI:  10.1002/ajb2.1423 ;  PMID:  32002990
• Reversible SUMOylation of FHY1 Regulates Phytochrome A Signaling in Arabidopsis.   DOI:  10.1016/j.molp.2020.04.002 ;  PMID:  32298785
• Self-transcriptional repression of the Arabidopsis NAC transcription factor ATAF2 and its genetic interaction with phytochrome A in modulating seedling photomorphogenesis.   DOI:  10.1007/s00425-020-03456-5 ;  PMID:  32892254
• Phytochrome A inhibits shade avoidance responses under strong shade through repressing the brassinosteroid pathway in Arabidopsis.   DOI:  10.1111/tpj.15018 ;  PMID:  33037720
• The SNL-HDA19 histone deacetylase complex antagonizes HY5 activity to repress photomorphogenesis in Arabidopsis.   DOI:  10.1111/nph.17114 ;  PMID:  33245784
• Arabidopsis FHY1 and FHY1-LIKE Are Not Required for Phytochrome A Signal Transduction in the Nucleus.   DOI:  10.1016/j.xplc.2019.100007 ;  PMID:  33404546
• Light-induced degradation of SPA2 via its N-terminal kinase domain is required for photomorphogenesis.   DOI:  10.1093/plphys/kiab156 ;  PMID:  33822236
• Differing biophysical properties underpin the unique signaling potentials within the plant phytochrome photoreceptor families.   DOI:  10.1073/pnas.2105649118 ;  PMID:  34039713
• Phytochrome A elevates plant circadian-clock components to suppress shade avoidance in deep-canopy shade.   DOI:  10.1073/pnas.2108176118 ;  PMID:  34187900
• Low light intensity delays vegetative phase change.   DOI:  10.1093/plphys/kiab243 ;  PMID:  34618024
• Mutual upregulation of HY5 and TZP in mediating phytochrome A signaling.   DOI:  10.1093/plcell/koab254 ;  PMID:  34741605
• Understanding the Shade Tolerance Responses Through Hints From Phytochrome A-Mediated Negative Feedback Regulation in Shade Avoiding Plants.   DOI:  10.3389/fpls.2021.813092 ;  PMID:  35003197
• Phytochromes A and B Mediate Light Stabilization of BIN2 to Regulate Brassinosteroid Signaling and Photomorphogenesis in Arabidopsis.   DOI:  10.3389/fpls.2022.865019 ;  PMID:  35432407
• Analysis of Phytochrome-Dependent Seed Germination in Arabidopsis.   DOI:  10.1007/978-1-0716-2297-1_8 ;  PMID:  35467203
• Physiological Analysis of Phototropic Responses to Blue and Red Light in Arabidopsis.   DOI:  10.1007/978-1-0716-2297-1_4 ;  PMID:  35467199
• TIME FOR COFFEE regulates phytochrome A-mediated hypocotyl growth through dawn-phased signaling.   DOI:  10.1093/plcell/koac138 ;  PMID:  35543486
• Arabidopsis Circadian Clock Repress Phytochrome a Signaling.   DOI:  10.3389/fpls.2022.809563 ;  PMID:  35645991
• Arabidopsis SPA2 represses seedling de-etiolation under multiple light conditions.   DOI:  10.1002/pld3.403 ;  PMID:  35662851
• RUP2 facilitates UVR8 redimerization via two interfaces.   DOI:  10.1016/j.xplc.2022.100428 ;  PMID:  36065466
• Arabidopsis phytochromes A and B synergistically repress SPA1 under blue light.   DOI:  10.1111/jipb.13412 ;  PMID:  36394421
• The FLOWERING LOCUS T gene expression is controlled by high-irradiance response and external coincidence mechanism in long days in Arabidopsis.   DOI:  10.1111/nph.18932 ;  PMID:  37084001
• SALT OVERLY SENSITIVE2 stabilizes phytochrome-interacting factors PIF4 and PIF5 to promote Arabidopsis shade avoidance.   DOI:  10.1093/plcell/koad119 ;  PMID:  37119311
• Influence of a phyA Mutation on Polyamine Metabolism in Arabidopsis Depends on Light Spectral Conditions.   DOI:  10.3390/plants12081689 ;  PMID:  37111912
• Local phytochrome signalling limits root growth in light by repressing auxin biosynthesis.   DOI:  10.1093/jxb/erad163 ;  PMID:  37140032
• Arabidopsis FIN219/JAR1 interacts with phytochrome A under far-red light and jasmonates in regulating hypocotyl elongation via a functional demand manner.   DOI:  10.1371/journal.pgen.1010779 ;  PMID:  37216398
• The structure of Arabidopsis phytochrome A reveals topological and functional diversification among the plant photoreceptor isoforms.   DOI:  10.1038/s41477-023-01435-8 ;  PMID:  37291396
• Physiological Characterization of a Plant Mitochondrial Calcium Uniporter in Vitro and in Vivo.   DOI:  10.1104/pp.16.01359 ;  PMID:  28031475
• Arabidopsis pollen tube germination and growth depend on the mitochondrial calcium uniporter complex.   DOI:  10.1111/nph.15189 ;  PMID:  29701876
• MCU proteins dominate in vivo mitochondrial Ca2+ uptake in Arabidopsis roots.   DOI:  10.1093/plcell/koac242 ;  PMID:  35938694
• CressExpress: a tool for large-scale mining of expression data from Arabidopsis.   DOI:  10.1104/pp.107.115535 ;  PMID:  18467456
• Gibberellin acts through jasmonate to control the expression of MYB21, MYB24, and MYB57 to promote stamen filament growth in Arabidopsis.   DOI:  10.1371/journal.pgen.1000440 ;  PMID:  19325888
• Three Arabidopsis DUF579 domain-containing GXM proteins are methyltransferases catalyzing 4-o-methylation of glucuronic acid on xylan.   DOI:  10.1093/pcp/pcs138 ;  PMID:  23045523
• Modification of the degree of 4-O-methylation of secondary wall glucuronoxylan.   DOI:  10.1016/j.plantsci.2014.01.005 ;  PMID:  24576763
• Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana.   DOI:  10.1073/pnas.0504682102 ;  PMID:  16251277
• SH3 Domain-Containing Protein 2 Plays a Crucial Role at the Step of Membrane Tubulation during Cell Plate Formation.   DOI:  10.1105/tpc.17.00108 ;  PMID:  28584166
• Interactions between Transport Protein Particle (TRAPP) complexes and Rab GTPases in Arabidopsis.   DOI:  10.1111/tpj.14442 ;  PMID:  31264742
• TRIPP Is a Plant-Specific Component of the Arabidopsis TRAPPII Membrane Trafficking Complex with Important Roles in Plant Development.   DOI:  10.1105/tpc.20.00044 ;  PMID:  32371545
• Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana.   DOI:  10.1093/nar/30.3.623 ;  PMID:  11809873
• Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana.   DOI:  10.3390/ijms23010511 ;  PMID:  35008936
• A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin.   DOI:  10.1105/tpc.12.12.2351 ;  PMID:  11148283
• Mitogen-activated protein kinase signaling in postgermination arrest of development by abscisic acid.   DOI:  10.1073/pnas.242607499 ;  PMID:  12434021
• Localization, ion channel regulation, and genetic interactions during abscisic acid signaling of the nuclear mRNA cap-binding protein, ABH1.   DOI:  10.1104/pp.009480 ;  PMID:  12427994
• The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation.   DOI:  10.1073/pnas.0307969100 ;  PMID:  14722360

Sequences: