Information report for AT1G06020
Gene Details
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Functional Descriptions
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- The phytochrome gene family in soybean and a dominant negative effect of a soybean PHYA transgene on endogenous Arabidopsis PHYA. DOI: 10.1007/s00299-013-1500-8 ; PMID: 24013793
- Fern Adiantum capillus-veneris phytochrome 1 comprises two native photochemical types similar to seed plant phytochrome A. DOI: 10.1016/j.jphotobiol.2013.10.007 ; PMID: 24246712
- Photoactivated UVR8-COP1 module determines photomorphogenic UV-B signaling output in Arabidopsis. DOI: 10.1371/journal.pgen.1004218 ; PMID: 24651064
- The Arabidopsis ZINC FINGER PROTEIN3 Interferes with Abscisic Acid and Light Signaling in Seed Germination and Plant Development. DOI: 10.1104/pp.113.234294 ; PMID: 24808098
- Arabidopsis Phytochrome A Directly Targets Numerous Promoters for Individualized Modulation of Genes in a Wide Range of Pathways. DOI: 10.1105/tpc.114.123950 ; PMID: 24794133
- In response to partial plant shading, the lack of phytochrome A does not directly induce leaf senescence but alters the fine-tuning of chlorophyll biosynthesis. DOI: 10.1093/jxb/eru060 ; PMID: 24604733
- Loss of the ETR1 ethylene receptor reduces the inhibitory effect of far-red light and darkness on seed germination of Arabidopsis thaliana. DOI: 10.3389/fpls.2014.00433 ; PMID: 25221561
- The shade avoidance syndrome in Arabidopsis: the antagonistic role of phytochrome a and B differentiates vegetation proximity and canopy shade. DOI: 10.1371/journal.pone.0109275 ; PMID: 25333270
- phyA-GFP is spectroscopically and photochemically similar to phyA and comprises both its native types, phyA' and phyA''. DOI: 10.1039/c4pp00220b ; PMID: 25297540
- Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis. DOI: 10.1016/j.bbrc.2014.10.059 ; PMID: 25450360
- Red-light-dependent interaction of phyB with SPA1 promotes COP1-SPA1 dissociation and photomorphogenic development in Arabidopsis. DOI: 10.1016/j.molp.2014.11.025 ; PMID: 25744387
Gene Resources
- UniProt: A0A178WHF2
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WHF2
- EnsemblPlants: AT1G06020.1
- Gramene: AT1G06020.1
- KEGG: ath:AT1G06020
- Orthologous matrix: GCTYFTK
- ExpressionAtlas: AT1G06020
- InterPro: IPR002139, IPR002173, IPR011611
- PANTHER: PTHR43085, PTHR43085:SF47
- SUPFAM: SSF53613
- PROSITE: PS00583, PS00584
- Gene3D: 3.40.1190.20
- OrthoDB: A0A178WHF2
- SWISS-MODEL: A0A178WHF2
- Conserved Domain Database: cd01167
Homologs
- Actinidia chinensis Achn318871
- Fragaria vesca mrna13356.1-v1.0-hybrid
- Malus domestica MdFRK2, MDP0000256917
- Oryza sativa OsFKI, OsFKII, OsFRK3, WLP2;OsFLN1, OsFLN2;HSA1
- Prunus persica Prupe.6G141700
- Pyrus bretschneideri Pbr018801.2
- Saccharum spontaneum Sspon.01G0003720-3C
Sequences
cDNA Sequence
- >AT1G06020.1
GGTAGGCGTATCACTACAATTATGGAACAAATGAAAATCAGATACAAGAATTTTTGCTGGAATGGTAATAAATCAGAAATTCAAAATATAGTCTACCTGGAATTTCCATAAACTTGGATATTCCACGTTTCAGTTCAAACATATCTTCAAGGATTGACTTGTTTATTATGTGACTTCAAAGGATTAAAAACCATTTGAGCCTTTATTATATAAAAACCTACTCCATAGTCCATACTTCGTTCATTTTTATACTCTCTTATCATTTTCATTTTTCGAACGGAAAATCGATCTTGTTCGAATGGCATCATCCACCGGCGAGAAAGGTCTCATCGTGAGCTTCGGCGAGATGCTCATTGACTTCGTCCCTACCGTATCCGGCGTCTCCCTCTCCGAATCCCCCGGATTTCTCAAAGCTCCCGGCGGTGCTCCGGCCAACGTCGCCATCGCTGTTTCACGTCTTGGAGGTCGTGCCGCCTTCGTTGGGAAGCTGGGAGACGATGATTTCGGTCATATGCTCGCCGGAATCTTGAGAAAGAACGGTGTCGACGATCAGGGGATCAATTTCGACGAAGGGGCGAGAACTGCACTCGCTTTTGTCACTTTGCGTTCTGACGGAGAACGAGAGTTTATGTTTTACCGGAATCCCAGCGCCGATATGCTTCTCCGGCCAGATGAACTGAATCTTGAACTTATCAGATCCGCGAAAGTGTTCCACTATGGATCAATAAGTTTGATAACAGAGCCATGTAGATCAGCTCACATGAAGGCAATGGAAGTGGCGAAAGAAGCTGGAGCTCTTCTTTCCTACGATCCAAACCTCAGGGAACCTCTTTGGCCATCACCTGAAGAAGCTAGGACACAGATCATGAGTATCTGGGACAAGGCTGACATCATTAAGGTCAGTGACGTGGAGCTTGAATTCTTGACCGAAAACAAAACCATGGATGATAAGACAGCAATGTCTCTATGGCATCCCAACCTTAAGCTCTTGCTTGTTACTCTCGGCGAAAAGGGATGTACTTATTTCACAAAGAAATTCCATGGATCGGTAGAAACATTCCATGTGGACGCCGTGGATACTACCGGAGCTGGAGATTCGTTTGTTGGTGCACTTCTACAACAGATTGTTGATGACCAGTCCGTACTCGAGGATGAAGCGAGGTTGAGAAAAGTGCTGAGATTTGCAAACGCTTGTGGAGCCATCACAACAACTAAAAAAGGAGCCATTCCAGCTCTTCCTACAGACATTGAAGCTCTCAGTTTTCTTAAAGACCAAAAGAAACGTCAAACCAATCTTAAATTCTCAAAATGGTGTTGTACGGCTTCTCCTTGTTAATTTTGATTTTGTGTGAGTTTAGATCCAAGCTGATAAGTCTTATTTGAAATAAAAGATCCCAC
CDS Sequence
- >AT1G06020.1
ATGGCATCATCCACCGGCGAGAAAGGTCTCATCGTGAGCTTCGGCGAGATGCTCATTGACTTCGTCCCTACCGTATCCGGCGTCTCCCTCTCCGAATCCCCCGGATTTCTCAAAGCTCCCGGCGGTGCTCCGGCCAACGTCGCCATCGCTGTTTCACGTCTTGGAGGTCGTGCCGCCTTCGTTGGGAAGCTGGGAGACGATGATTTCGGTCATATGCTCGCCGGAATCTTGAGAAAGAACGGTGTCGACGATCAGGGGATCAATTTCGACGAAGGGGCGAGAACTGCACTCGCTTTTGTCACTTTGCGTTCTGACGGAGAACGAGAGTTTATGTTTTACCGGAATCCCAGCGCCGATATGCTTCTCCGGCCAGATGAACTGAATCTTGAACTTATCAGATCCGCGAAAGTGTTCCACTATGGATCAATAAGTTTGATAACAGAGCCATGTAGATCAGCTCACATGAAGGCAATGGAAGTGGCGAAAGAAGCTGGAGCTCTTCTTTCCTACGATCCAAACCTCAGGGAACCTCTTTGGCCATCACCTGAAGAAGCTAGGACACAGATCATGAGTATCTGGGACAAGGCTGACATCATTAAGGTCAGTGACGTGGAGCTTGAATTCTTGACCGAAAACAAAACCATGGATGATAAGACAGCAATGTCTCTATGGCATCCCAACCTTAAGCTCTTGCTTGTTACTCTCGGCGAAAAGGGATGTACTTATTTCACAAAGAAATTCCATGGATCGGTAGAAACATTCCATGTGGACGCCGTGGATACTACCGGAGCTGGAGATTCGTTTGTTGGTGCACTTCTACAACAGATTGTTGATGACCAGTCCGTACTCGAGGATGAAGCGAGGTTGAGAAAAGTGCTGAGATTTGCAAACGCTTGTGGAGCCATCACAACAACTAAAAAAGGAGCCATTCCAGCTCTTCCTACAGACATTGAAGCTCTCAGTTTTCTTAAAGACCAAAAGAAACGTCAAACCAATCTTAAATTCTCAAAATGGTGTTGTACGGCTTCTCCTTGTTAA
Protein Sequence
- >AT1G06020.1
MASSTGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALPTDIEALSFLKDQKKRQTNLKFSKWCCTASPC