Information report for AT1G06000
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , seed , carpel , petal , stem , flower bud , guard cell
Literature and News
- Investigations on the photoregulation of chloroplast movement and leaf positioning in Arabidopsis. DOI: 10.1093/pcp/pcs098 ; PMID: 22782888
- A phytochrome-phototropin light signaling complex at the plasma membrane. DOI: 10.1073/pnas.1120203109 ; PMID: 22773817
- The mediator complex subunit PFT1 interferes with COP1 and HY5 in the regulation of Arabidopsis light signaling. DOI: 10.1104/pp.112.197319 ; PMID: 22760208
- Rice PHYC gene: structure, expression, map position and evolution. DOI: 10.1023/a:1006488119301 ; PMID: 11094977
- Transcriptional programs related to phytochrome A function in Arabidopsis seed germination. DOI: 10.1093/mp/sst001 ; PMID: 23292879
- Genetic interactions between brassinosteroid-inactivating P450s and photomorphogenic photoreceptors in Arabidopsis thaliana. DOI: 10.1534/g3.112.004580 ; PMID: 23275881
- Arabidopsis phytochrome B promotes SPA1 nuclear accumulation to repress photomorphogenesis under far-red light. DOI: 10.1105/tpc.112.107086 ; PMID: 23371951
- Conditional involvement of constitutive photomorphogenic1 in the degradation of phytochrome A. DOI: 10.1104/pp.112.213280 ; PMID: 23391578
- and phytochrome-dependent regulation of hypocotyl elongation in Arabidopsis thaliana. DOI: 10.1007/s11103-013-0029-0 ; PMID: 23456246
- Temperature, light and nitrate sensing coordinate Arabidopsis seed dormancy cycling, resulting in winter and summer annual phenotypes. DOI: 10.1111/tpj.12186 ; PMID: 23590427
- Genetic variation in four maturity genes affects photoperiod insensitivity and PHYA-regulated post-flowering responses of soybean. DOI: 10.1186/1471-2229-13-91 ; PMID: 23799885
- Comparative functional analysis of full-length and N-terminal fragments of phytochrome C, D and E in red light-induced signaling. DOI: 10.1111/nph.12364 ; PMID: 23772959
- Phototropin 1 and cryptochrome action in response to green light in combination with other wavelengths. DOI: 10.1007/s00425-012-1767-y ; PMID: 23007554
- Phytochrome-induced SIG2 expression contributes to photoregulation of phytochrome signalling and photomorphogenesis in Arabidopsis thaliana. DOI: 10.1093/jxb/ert308 ; PMID: 24078666
- Dynamics of the shade-avoidance response in Arabidopsis. DOI: 10.1104/pp.113.221549 ; PMID: 23893169
- An evolutionarily conserved signaling mechanism mediates far-red light responses in land plants. DOI: 10.1105/tpc.112.104331 ; PMID: 23303916
- A recent local sweep at the PHYA locus in the Northern European Spiterstulen population of Arabidopsis lyrata. DOI: 10.1111/mec.12682 ; PMID: 24471518
- Functional diversity of phytochrome family in the control of light and gibberellin-mediated germination in Arabidopsis. DOI: 10.1111/pce.12286 ; PMID: 24471455
- Organization of protein complexes under photomorphogenic UV-B in Arabidopsis. DOI: 10.4161/psb.27206 ; PMID: 24304604
- Protein phosphatase activity and acidic/alkaline balance as factors regulating the state of phytochrome A and its two native pools in the plant cell. DOI: 10.1111/j.1751-1097.2012.01226.x ; PMID: 22913784
Gene Resources
- UniProt: W8PVE7
- EMBL: KJ139027
- AlphaFoldDB: W8PVE7
- EnsemblPlants: AT1G06000.1
- Gramene: AT1G06000.1
- KEGG: ath:AT1G06000
- Orthologous matrix: DYLACVG
- ExpressionAtlas: AT1G06000
- InterPro: IPR002213
- PANTHER: PTHR48047, PTHR48047:SF5
- SUPFAM: SSF53756
- Gene3D: 3.40.50.2000
- SWISS-MODEL: W8PVE7
- Conserved Domain Database: cd03784
Homologs
- Glycine max GmUGT2, GmUGT4
- Malus domestica PGT2
- Nicotiana attenuata A4A49_20123
- Oryza sativa UGT703A1, RUGT-5, LTG5, OsUGT90A1, OsUGT706C2, cZOGT1, cZOGT2, OsUGT706D1, UGT703A1
- Sesamum indicum SIN_1023511
Sequences
cDNA Sequence
- >AT1G06000.1
CCATTGTCGGCAGTAAAACTAAAAATAAAAGGAGTTCCACTTTTCAATTTTTCTCCACTCCAAAACCAGAAAGAAAGAAAAAAACATCAATCATGACAACAACAACAACGAAGAAGCCGCACGTTCTGGTGATACCGTTTCCACAATCCGGTCACATGGTTCCACATCTTGACCTCACGCATCAGATTCTTCTCCGTGGAGCCACCGTCACTGTCCTCGTCACACCCAAAAACTCTTCCTATCTCGATGCTCTCCGTTCTCTTCACTCCCCGGAACACTTCAAAACCCTAATCCTTCCTTTTCCTTCTCACCCTTGTATACCTTCCGGTGTCGAATCTCTCCAGCAACTTCCTCTCGAAGCTATAGTTCACATGTTTGATGCTCTCTCTCGTCTCCACGACCCTCTCGTTGACTTTCTCAGCCGTCAACCACCGTCGGATCTCCCCGACGCCATCCTAGGAAGCTCATTTCTCAGCCCTTGGATTAACAAAGTAGCTGATGCTTTCTCTATTAAGTCCATTAGTTTCTTACCCATCAATGCTCATTCGATCTCCGTCATGTGGGCTCAAGAAGATAGAAGCTTCTTCAACGATCTCGAGACTGCCACAACGGAAAGCTACGGGCTCGTCATCAACAGTTTCTACGACCTCGAGCCTGAGTTTGTAGAAACTGTTAAAACACGTTTCCTGAATCACCACCGTATATGGACCGTCGGACCGTTGCTCCCCTTTAAAGCTGGCGTTGACCGTGGCGGACAAAGCTCAATCCCGCCGGCGAAAGTCTCGGCTTGGTTAGATTCGTGCCCCGAGGATAACTCCGTCGTATACGTCGGTTTTGGAAGCCAGATCCGGCTCACGGCGGAGCAAACAGCTGCTTTAGCGGCGGCGTTGGAGAAAAGCAGTGTGCGTTTCATATGGGCGGTGAGAGACGCAGCTAAGAAGGTGAACTCCAGCGATAACTCCGTTGAGGAAGATGTGATCCCGGCGGGATTTGAAGAGAGAGTGAAGGAGAAAGGACTCGTGATAAGAGGATGGGCCCCACAAACTATGATTCTTGAGCATCGAGCCGTTGGATCTTACCTAACTCATTTGGGTTGGGGTTCGGTTCTGGAAGGAATGGTCGGAGGAGTTATGTTGCTAGCGTGGCCGATGCAAGCAGACCATTTCTTTAACACGACGCTCATCGTTGATAAACTAAGAGCCGCAGTGCGAGTTGGAGAGAACAGAGACTCGGTTCCTGACTCGGACAAGCTCGCTAGGATTTTGGCTGAGTCGGCGAGAGAGGACTTGCCGGAGAGAGTTACGTTGATGAAGCTGAGGGAGAAAGCTATGGAGGCCATTAAAGAAGGTGGGAGCTCTTACAAGAACTTGGATGAGCTCGTTGCAGAGATGTGTTTGTAATAAATATCCTCTTCTCTTGCTTTTTAAGATTTGTTTGTTTAAGAGAGTCAATAAGCAAATGGGGTAAGAAAATTGTTATTTATTTTCCTGTTATTTTTCTTTCTTAATTTGATATGACAACGATTAACTCGATTTAGAGTTCGTTAGTCAATGTTTTCTAGTATGATGATGGCAATAATACTAAGAC
CDS Sequence
- >AT1G06000.1
ATGACAACAACAACAACGAAGAAGCCGCACGTTCTGGTGATACCGTTTCCACAATCCGGTCACATGGTTCCACATCTTGACCTCACGCATCAGATTCTTCTCCGTGGAGCCACCGTCACTGTCCTCGTCACACCCAAAAACTCTTCCTATCTCGATGCTCTCCGTTCTCTTCACTCCCCGGAACACTTCAAAACCCTAATCCTTCCTTTTCCTTCTCACCCTTGTATACCTTCCGGTGTCGAATCTCTCCAGCAACTTCCTCTCGAAGCTATAGTTCACATGTTTGATGCTCTCTCTCGTCTCCACGACCCTCTCGTTGACTTTCTCAGCCGTCAACCACCGTCGGATCTCCCCGACGCCATCCTAGGAAGCTCATTTCTCAGCCCTTGGATTAACAAAGTAGCTGATGCTTTCTCTATTAAGTCCATTAGTTTCTTACCCATCAATGCTCATTCGATCTCCGTCATGTGGGCTCAAGAAGATAGAAGCTTCTTCAACGATCTCGAGACTGCCACAACGGAAAGCTACGGGCTCGTCATCAACAGTTTCTACGACCTCGAGCCTGAGTTTGTAGAAACTGTTAAAACACGTTTCCTGAATCACCACCGTATATGGACCGTCGGACCGTTGCTCCCCTTTAAAGCTGGCGTTGACCGTGGCGGACAAAGCTCAATCCCGCCGGCGAAAGTCTCGGCTTGGTTAGATTCGTGCCCCGAGGATAACTCCGTCGTATACGTCGGTTTTGGAAGCCAGATCCGGCTCACGGCGGAGCAAACAGCTGCTTTAGCGGCGGCGTTGGAGAAAAGCAGTGTGCGTTTCATATGGGCGGTGAGAGACGCAGCTAAGAAGGTGAACTCCAGCGATAACTCCGTTGAGGAAGATGTGATCCCGGCGGGATTTGAAGAGAGAGTGAAGGAGAAAGGACTCGTGATAAGAGGATGGGCCCCACAAACTATGATTCTTGAGCATCGAGCCGTTGGATCTTACCTAACTCATTTGGGTTGGGGTTCGGTTCTGGAAGGAATGGTCGGAGGAGTTATGTTGCTAGCGTGGCCGATGCAAGCAGACCATTTCTTTAACACGACGCTCATCGTTGATAAACTAAGAGCCGCAGTGCGAGTTGGAGAGAACAGAGACTCGGTTCCTGACTCGGACAAGCTCGCTAGGATTTTGGCTGAGTCGGCGAGAGAGGACTTGCCGGAGAGAGTTACGTTGATGAAGCTGAGGGAGAAAGCTATGGAGGCCATTAAAGAAGGTGGGAGCTCTTACAAGAACTTGGATGAGCTCGTTGCAGAGATGTGTTTGTAA
Protein Sequence
- >AT1G06000.1
MTTTTTKKPHVLVIPFPQSGHMVPHLDLTHQILLRGATVTVLVTPKNSSYLDALRSLHSPEHFKTLILPFPSHPCIPSGVESLQQLPLEAIVHMFDALSRLHDPLVDFLSRQPPSDLPDAILGSSFLSPWINKVADAFSIKSISFLPINAHSISVMWAQEDRSFFNDLETATTESYGLVINSFYDLEPEFVETVKTRFLNHHRIWTVGPLLPFKAGVDRGGQSSIPPAKVSAWLDSCPEDNSVVYVGFGSQIRLTAEQTAALAAALEKSSVRFIWAVRDAAKKVNSSDNSVEEDVIPAGFEERVKEKGLVIRGWAPQTMILEHRAVGSYLTHLGWGSVLEGMVGGVMLLAWPMQADHFFNTTLIVDKLRAAVRVGENRDSVPDSDKLARILAESAREDLPERVTLMKLREKAMEAIKEGGSSYKNLDELVAEMCL