Information report for AT1G05900
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , carpel , petal , stem , pollen , guard cell
Literature and News
- Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean. DOI: 10.1104/pp.110.160796 ; PMID: 20864544
- Simple construction of plant RNAi vectors using long oligonucleotides. DOI: 10.1007/s10265-009-0228-6 ; PMID: 19347568
- A glutathione S-transferase regulated by light and hormones participates in the modulation of Arabidopsis seedling development. DOI: 10.1104/pp.110.159152 ; PMID: 20935176
Gene Resources
- UniProt: A0A178W393
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178W393
- EnsemblPlants: AT1G05900.2
- Gramene: AT1G05900.2
- KEGG: ath:AT1G05900
- Orthologous matrix: MGCAEIP
- ExpressionAtlas: AT1G05900
- InterPro: IPR000445, IPR003265, IPR003651
- PANTHER: PTHR43286, PTHR43286:SF1
- SUPFAM: SSF48150
- PROSITE: PS01155
- Gene3D: 1.10.1670.10, 1.10.340.30
- OrthoDB: A0A178W393
- SWISS-MODEL: A0A178W393
- Conserved Domain Database: cd00056
Homologs
- Brassica rapa Bra032450
Sequences
cDNA Sequence
- >AT1G05900.1
ATTACCTGAATTTGATGAAACACAAAAATTGATTGGCTCTATGATTCTCACCGGAGCCGCTTCAACATTTCCCATCGTCGCTCGAGTTTTGAACGCTATGAATCGCCGTATGTATGCTGCTACTACTCTATCATCTGCCAAATCAATCTCTGCAGAATCCCTAAATCTTCGTTCCGATTCCAATTCAGAGGCAGCGCATGGTGCTTCTGAGTCTGAGACTCGAGTCTCTTTAAGGAAGAAGAGGATAAAGCAGGATGATTTGGAGCCTGTAAAGAAATGTTCCGCCAGAGAAACCAAGGCCCGCAAGGACATGTGTGGATTACCTGATATAGAAGACTCTCCTTATAAGAAGACTAATGGAACTGCTTCATCTAGGACGAGAAAACTAAACTCATACATAAAATCAACAGAAGCTAGCCCTTCTGCATCGTCGATCAAAACAGCAGGGCTAGGCATACCACCTGAAAACTGGGAAAAGGTGCTCGAGGGTATTCGAAAAATGAAACCTTCAGAAGAAGCACCAGTTAATGCTGTAGAATGTGATAGAACCGGAAGCTTTTTACCTCCAAAGGAAAGGCGATTTTATGTGCTCATAGGAACACTTCTTTCAAGTCAGACTAAAGAGCACATAACTGGTGCGGCAGTAGAACGACTTCATCAAAATGGCCTTCTCACTCCTGAAGCCATTGACAAAGCCGATGAATCAACCATTAAGGAATTGATCTATCCGGTTGGATTCTATACTAGAAAGGCTACTAATGTGAAGAAAGTTGCAAAAATATGTCTAATGGAATATGACGGTGACATTCCAAGGACTTTGGAAGAACTACTTTCACTTCCAGGAGTTGGTCCTAAGATTGCTCATCTGGTTTTGCATGTAGCCTGGAATGATGTTCAAGGGATATGTGTAGACACACATGTGCATCGTATTTGCAATAGACTTGGTTGGGTGTCTAAACCTGGAACGAAACAGGTGCTTCTCTAACACCAGGTTTATGTTGAAGTATATATGGCTATGAGATTGATTTCTTAACACTTGGTAAAATTTGGTTCTTCTTTAGTTTGCTTATCTGCTCTTGGTCACCTATCTCTACTTTGTTCTTGACCAGAAAACCTCGTCCCCTGAGGAAACTAGAGTAGCTCTGCAACAATGGCTTCCAAAAGGAGAATGGGTGGCTATAAACTTTCTGTTGGTAGGTTTTGGACAAACGATATGCACACCGCTAAGACCACACTGTGGAACTTGTAGTATTACTGAGATTTGCCCTTCTGCCTTCAAGGAGACCCCGAGCACATCATCCAAATTGAAGAAATCTATCAAAAGCAAGAAGCTTTAGTTGCTTTGGCTCTGGATTCTCCTTCTAGATCATTGTTAAACCCATTTTTTGATTAGTCCTCGGTTAAAGTTAAATTGTATCCAAGATATTGTATAGCTTTATGGGGAATGCAAGAGCATCCCACTTGTGTGTAAAACTAAAACTTATAGAATGGAAACTTACCCTTATGAAAGACACTGGGCAAGTACACTTTTAACTGAATATTATGAAA - >AT1G05900.2
ATTACCTGAATTTGATGAAACACAAAAATTGATTGGCTCTATGATTCTCACCGGAGCCGCTTCAACATTTCCCATCGTCGCTCGAGTTTTGAACGCTATGAATCGCCGTATGTATGCTGCTACTACTCTATCATCTGCCAAATCAATCTCTGCAGAATCCCTAAATCTTCGTTCCGATTCCAATTCAGAGGCAGCGCATGGTGCTTCTGAGTCTGAGACTCGAGTCTCTTTAAGGAAGAAGAGGATAAAGCAGGATGATTTGGAGCCTGTAAAGAAATGTTCCGCCAGAGAAACCAAGGCCCGCAAGGACATGTGTGGATTACCTGATATAGAAGACTCTCCTTATAAGAAGACTAATGGAACTGCTTCATCTAGGACGAGAAAACTAAACTCATACATAAAATCAACAGAAGCTAGCCCTTCTGCATCGTCGATCAAAACAGCAGGGCTAGGCATACCACCTGAAAACTGGGAAAAGGTGCTCGAGGGTATTCGAAAAATGAAACCTTCAGAAGAAGCACCAGTTAATGCTGTAGAATGTGATAGAACCGGAAGCTTTTTACCTCCAAAGGAAAGGCGATTTTATGTGCTCATAGGAACACTTCTTTCAAGTCAGACTAAAGAGCACATAACTGGTGCGGCAGTAGAACGACTTCATCAAAATGGCCTTCTCACTCCTGAAGCCATTGACAAAGCCGATGAATCAACCATTAAGGAATTGATCTATCCGGTTGGATTCTATACTAGAAAGGCTACTAATGTGAAGAAAGTTGCAAAAATATGTCTAATGGAATATGACGGTGACATTCCAAGGACTTTGGAAGAACTACTTTCACTTCCAGGAGTTGGTCCTAAGATTGCTCATCTGGTTTTGCATGTAGCCTGGAATGATGTTCAAGGGATATGTGTAGACACACATGTGCATCGTATTTGCAATAGACTTGGTTGGGTGTCTAAACCTGGAACGAAACAGGTGCTTCTCTAACACCAGGTTTATGTTGAAGTATATATGGCTATGAGATTGATTTCTTAACACTTGGTAAAATTTGGTTCTTCTTTAGTTTGCTTATCTGCTCTTGGTCACCTATCTCTACTTTGTTCTTGACCAGAAAACCTCGTCCCCTGAGGAAACTAGAGTAGCTCTGCAACAATGGCTTCCAAAAGGAGAATGGGTGGCTATAAACTTTCTGTTGGTAGGTTTTGGACAAACGATATGCACACCGCTAAGACCACACTGTGGAACTTGTAGTATTACTGAGATTTGCCCTTCTGCCTTCAAGGAGACCCCGAGCACATCATCCAAATTGAAGAAATCTATCAAAAGCAAGAAGCTTTAGTTGCTTTGGCTCTGGATTCTCCTTCTAGATCATTGTTAAACCCATTTTTTGATTAGTCCTCGGTTAAAGTTAAATTGTATCCAAGATATTGTATAGCTTTATGGGGAATGCAAGAGCATCCCACTTGTGTGTAAAACTAAAACTTATAGAATGGAAACTTACCCTTATGAAAGACACTGGGCAAGTACACTTTTAACTGAATATTATGAAA
CDS Sequence
- >AT1G05900.1
ATGATTCTCACCGGAGCCGCTTCAACATTTCCCATCGTCGCTCGAGTTTTGAACGCTATGAATCGCCGTATGTATGCTGCTACTACTCTATCATCTGCCAAATCAATCTCTGCAGAATCCCTAAATCTTCGTTCCGATTCCAATTCAGAGGCAGCGCATGGTGCTTCTGAGTCTGAGACTCGAGTCTCTTTAAGGAAGAAGAGGATAAAGCAGGATGATTTGGAGCCTGTAAAGAAATGTTCCGCCAGAGAAACCAAGGCCCGCAAGGACATGTGTGGATTACCTGATATAGAAGACTCTCCTTATAAGAAGACTAATGGAACTGCTTCATCTAGGACGAGAAAACTAAACTCATACATAAAATCAACAGAAGCTAGCCCTTCTGCATCGTCGATCAAAACAGCAGGGCTAGGCATACCACCTGAAAACTGGGAAAAGGTGCTCGAGGGTATTCGAAAAATGAAACCTTCAGAAGAAGCACCAGTTAATGCTGTAGAATGTGATAGAACCGGAAGCTTTTTACCTCCAAAGGAAAGGCGATTTTATGTGCTCATAGGAACACTTCTTTCAAGTCAGACTAAAGAGCACATAACTGGTGCGGCAGTAGAACGACTTCATCAAAATGGCCTTCTCACTCCTGAAGCCATTGACAAAGCCGATGAATCAACCATTAAGGAATTGATCTATCCGGTTGGATTCTATACTAGAAAGGCTACTAATGTGAAGAAAGTTGCAAAAATATGTCTAATGGAATATGACGGTGACATTCCAAGGACTTTGGAAGAACTACTTTCACTTCCAGGAGTTGGTCCTAAGATTGCTCATCTGGTTTTGCATGTAGCCTGGAATGATGTTCAAGGGATATGTGTAGACACACATGTGCATCGTATTTGCAATAGACTTGGTTGGGTGTCTAAACCTGGAACGAAACAGGTGCTTCTCTAA - >AT1G05900.2
ATGATTCTCACCGGAGCCGCTTCAACATTTCCCATCGTCGCTCGAGTTTTGAACGCTATGAATCGCCGTATGTATGCTGCTACTACTCTATCATCTGCCAAATCAATCTCTGCAGAATCCCTAAATCTTCGTTCCGATTCCAATTCAGAGGCAGCGCATGGTGCTTCTGAGTCTGAGACTCGAGTCTCTTTAAGGAAGAAGAGGATAAAGCAGGATGATTTGGAGCCTGTAAAGAAATGTTCCGCCAGAGAAACCAAGGCCCGCAAGGACATGTGTGGATTACCTGATATAGAAGACTCTCCTTATAAGAAGACTAATGGAACTGCTTCATCTAGGACGAGAAAACTAAACTCATACATAAAATCAACAGAAGCTAGCCCTTCTGCATCGTCGATCAAAACAGCAGGGCTAGGCATACCACCTGAAAACTGGGAAAAGGTGCTCGAGGGTATTCGAAAAATGAAACCTTCAGAAGAAGCACCAGTTAATGCTGTAGAATGTGATAGAACCGGAAGCTTTTTACCTCCAAAGGAAAGGCGATTTTATGTGCTCATAGGAACACTTCTTTCAAGTCAGACTAAAGAGCACATAACTGGTGCGGCAGTAGAACGACTTCATCAAAATGGCCTTCTCACTCCTGAAGCCATTGACAAAGCCGATGAATCAACCATTAAGGAATTGATCTATCCGGTTGGATTCTATACTAGAAAGGCTACTAATGTGAAGAAAGTTGCAAAAATATGTCTAATGGAATATGACGGTGACATTCCAAGGACTTTGGAAGAACTACTTTCACTTCCAGGAGTTGGTCCTAAGATTGCTCATCTGGTTTTGCATGTAGCCTGGAATGATGTTCAAGGGATATGTGTAGACACACATGTGCATCGTATTTGCAATAGACTTGGTTGGGTGTCTAAACCTGGAACGAAACAGGTGCTTCTCTAA
Protein Sequence
- >AT1G05900.1
MILTGAASTFPIVARVLNAMNRRMYAATTLSSAKSISAESLNLRSDSNSEAAHGASESETRVSLRKKRIKQDDLEPVKKCSARETKARKDMCGLPDIEDSPYKKTNGTASSRTRKLNSYIKSTEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQVLL - >AT1G05900.2
MILTGAASTFPIVARVLNAMNRRMYAATTLSSAKSISAESLNLRSDSNSEAAHGASESETRVSLRKKRIKQDDLEPVKKCSARETKARKDMCGLPDIEDSPYKKTNGTASSRTRKLNSYIKSTEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQVLL