Information report for AT1G05890
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , plant sperm cell , guard cell
Literature and News
- Functional characterization of phytochrome autophosphorylation in plant light signaling. DOI: 10.1093/pcp/pcq025 ; PMID: 20203237
- Peroxisome division and proliferation in plants. DOI: 10.1042/BST0380817 ; PMID: 20491669
- Light-induced degradation of phyA is promoted by transfer of the photoreceptor into the nucleus. DOI: 10.1007/s11103-010-9649-9 ; PMID: 20473552
- Jasmonate and phytochrome A signaling in Arabidopsis wound and shade responses are integrated through JAZ1 stability. DOI: 10.1105/tpc.109.067728 ; PMID: 20435902
- Subcellular sites of the signal transduction and degradation of phytochrome A. DOI: 10.1093/pcp/pcq121 ; PMID: 20739301
Gene Resources
- UniProt: A0A178WAN2
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WAN2
- EnsemblPlants: AT1G05890.1
- Gramene: AT1G05890.1
- KEGG: ath:AT1G05890
- Orthologous matrix: FEHACES
- ExpressionAtlas: AT1G05890
- InterPro: IPR001841, IPR002867, IPR013083
- PANTHER: PTHR11685
- SUPFAM: SSF57850
- PROSITE: PS50089, PS51873
- Gene3D: 1.20.120.1750, 3.30.40.10
- OrthoDB: A0A178WAN2
- SWISS-MODEL: A0A178WAN2
- Conserved Domain Database: cd20346, cd22583, cd23141
Homologs
- Daucus carota DCAR_022379
- Malus domestica MDP0000266267, MDP0000286589
- Pyrus bretschneideri Pbr037384.1, Pbr011696.1, Pbr035981.1
- Setaria italica Seita.8G217300
- Setaria viridis SEVIR_8G228300v2
- Zea mays Zm00001d007709
Sequences
cDNA Sequence
- >AT1G05890.1
ATAGTATTAAACTTTTTTTTGTTGGTTACTAAAAATCAATTGAAACCGATAGTGGCAAAAGTCCATATATCTTTCTCTCATCTACTCGATTTCTGAATCGCGAACGCAGCGAGCGATCCGGAATCGAGAGAGAGAGCTACCAATTTTTCCAACTTGTTCGGTTCCTTATAAAGCTGTTTACTTTCCCTTGCGAATTCTCTCTCTCTCTACTATAAAGCAATACCCTTTTCTTTCTTTTTTGGTAACCCCCAAACCCTACTTTGTCCAGCGAGAAAGGAAGAGGGGTTTCGTCTGATTCCGCTAAATCTCTAGTCTTTATCTAAAGATCATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGAGTAATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCACTGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGAGATCTCTCAGGTTTCAGTTACATCACTCAGTCTCTCTCACAAAGGTCTAGATTACTCAGGAAGAAGAAAGACTTTTTAAGAGTTCAGCAAATTGGAGAAAGGTTTGGGGTTTAGAATACTTTTGACTACACTCCTGTGAGTTTGAAGGCTGTTAAGGCACAAGACTGCACACACAAGTTAACTATCTCTCTCTGTCTTAAGGGTTCATGATAGTCTTTGCTTACCCTAAATATTGTATAGTATTAAAGAATCTGCACATTGTTACTTTGGCTTTTGATTGCCTTTTGAACCATCTGAAGTTTCTTATCTGAATTGAGTTCAAGCTGCAAATGGTACCACCATTGTGTCATAAGAAAGCATTATTTGGCTCTTTTACAAACTTGCTTGTCAAAGAGAACCCTTCATGCGACTTAATTAATATTGCCTTTGTAATAACGCGCGAAACACAAATCTTCTCTGCCTAATGCAGTAGTCATGTGTTGACTCCTTCAAAATTTCCAAGAAGTTAG - >AT1G05890.2
ATAGTATTAAACTTTTTTTTGTTGGTTACTAAAAATCAATTGAAACCGATAGTGGCAAAAGTCCATATATCTTTCTCTCATCTACTCGATTTCTGAATCGCGAACGCAGCGAGCGATCCGGAATCGAGAGAGAGAGCTACCAATTTTTCCAACTTGTTCGGTTCCTTATAAAGCTGTTTACTTTCCCTTGCGAATTCTCTCTCTCTCTACTATAAAGCAATACCCTTTTCTTTCTTTTTTGGTAACCCCCAAACCCTACTTTGTCCAGCGAGAAAGGAAGAGGGGTTTCGTCTGATTCCGCTAAATCTCTAGTCTTTATCTAAAGATCATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGAGTAATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCACTGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGAGATCTCTCAGGTTTCAGTTACATCACTCAGTCTCTCTCACAAAGGTCTAGATTACTCAGGAAGAAGAAAGACTTTTTAAGAGTTCAGCAAATTGGAGAAAGGTTTGGGGTTTAGAATACTTTTGACTACACTCCTGTGAGTTTGAAGGCTGTTAAGGCACAAGACTGCACACACAAGTTAACTATCTCTCTCTGTCTTAAGGGTTCATGATAGTCTTTGCTTACCCTAAATATTGTATAGTATTAAAGAATCTGCACATTGTTACTTTGGCTTTTGATTGCCTTTTGAACCATCTGAAGTTTCTTATCTGAATTGAGTTCAAGCTGCAAATGGTACCACCATTGTGTCATAAGAAAGCATTATTTGGCTCTTTTACAAACTTGCTTGTCAAAGAGAACCCTTCATGCGACTTAATTAATATTGCCTTTGTAATAACGCGCGAAACACAAATCTTCTCTGCCTAATGCAGTAGTCATGTGTTGACTCCTTCAAAATTTCCAAGAAGTTAG
CDS Sequence
- >AT1G05890.1
ATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGAGTAATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCACTGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGA - >AT1G05890.2
ATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGAGTAATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCACTGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGA
Protein Sequence
- >AT1G05890.1
MDSDDDMHDMDSVDYDYYSGGTYDDNDSDETDFGFGEADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDVEASTLLLHYHWSVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCLNAWTEHGERTGGFYACNRYEAAKQEGLYDEAERRREMAKNSLERYTHYYERWASNQVSRQKAMGDLQKMQSEKLGKLSDIQCTPESQLKFIAEAWLQIIECRRVLKWTYAYGYYLQDHAKKPFFEYLQGEAESGLERLHKCVEKDIEVFELAEGPSEEFNHFRTKLTGLTSITKTFFENLVKALENGLADVDSQAASSKPANSKPSSKTKGGGKGKGSSKNGGSSRNPDGN - >AT1G05890.2
MDSDDDMHDMDSVDYDYYSGGTYDDNDSDETDFGFGEADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDVEASTLLLHYHWSVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCLNAWTEHGERTGGFYACNRYEAAKQEGLYDEAERRREMAKNSLERYTHYYERWASNQVSRQKAMGDLQKMQSEKLGKLSDIQCTPESQLKFIAEAWLQIIECRRVLKWTYAYGYYLQDHAKKPFFEYLQGEAESGLERLHKCVEKDIEVFELAEGPSEEFNHFRTKLTGLTSITKTFFENLVKALENGLADVDSQAASSKPANSKPSSKTKGGGKGKGSSKNGGSSRNPDGN