Information report for AT1G05810
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Technical advance: an automated device for cryofixation of specimens of electron microscopy using liquid helium. DOI: 10.1093/pcp/pce132 ; PMID: 11577181
- Light-induced growth promotion by SPA1 counteracts phytochrome-mediated growth inhibition during de-etiolation. DOI: 10.1104/pp.126.3.1291 ; PMID: 11457980
- Two homologous ATP-binding cassette transporter proteins, AtMDR1 and AtPGP1, regulate Arabidopsis photomorphogenesis and root development by mediating polar auxin transport. DOI: 10.1104/pp.105.061572 ; PMID: 15908594
- Light-regulated overexpression of an Arabidopsis phytochrome A gene in rice alters plant architecture and increases grain yield. DOI: 10.1007/s00425-005-0101-3 ; PMID: 16136335
- Arabidopsis FHY1 protein stability is regulated by light via phytochrome A and 26S proteasome. DOI: 10.1104/pp.105.067645 ; PMID: 16244150
- Nuclear accumulation of the phytochrome A photoreceptor requires FHY1. DOI: 10.1016/j.cub.2005.10.042 ; PMID: 16332538
- The Arabidopsis SPA1 gene is required for circadian clock function and photoperiodic flowering. DOI: 10.1111/j.1365-313X.2006.02737.x ; PMID: 16709190
Gene Resources
- UniProt: A0A654EC84
- EMBL: CACRSJ010000104, CACSHJ010000087
- AlphaFoldDB: A0A654EC84
- EnsemblPlants: AT1G05810.2
- Gramene: AT1G05810.2
- ExpressionAtlas: AT1G05810
- InterPro: IPR001806, IPR005225, IPR027417
- PANTHER: PTHR47979
- SUPFAM: SSF52540
- PROSITE: PS51419, PS51420, PS51421
- Gene3D: 3.40.50.300
- OrthoDB: A0A654EC84
- SWISS-MODEL: A0A654EC84
- Conserved Domain Database: cd01868
Homologs
- Actinidia chinensis Achn273391
- Cicer arietinum Ca_00017
- Fragaria vesca mrna29786.1-v1.0-hybrid
- Gossypium hirsutum Gh_A09G1177
- Lupinus albus Lalb_Chr04g0259661
- Malus domestica MDP0000180376
- Oryza sativa OsRab11, RGP1, OsRab11C1, OsPRA2
- Sesamum indicum SIN_1023555
- Solanum lycopersicum Solyc04g012180.3
Sequences
cDNA Sequence
- >AT1G05810.2
AATATAGAAAAAGAAAAAGGTAACGACATTAAAGAAGGTGCACTTAATGCGCAGTATGTCCTCTTGTGCCAGCTTGTTGCACCGTCTTCCGTCTCCTCCTCTTTCCCTCTCTCTCTCTCTCCAAACCAGTCCTACTTCTCTCTCTAGAAACCTAGGGAAGAAGAAGAAGACGGTGAAGCGAGCGATGTCTTCGGACGACGAAGGAAGAGAGGAGTATCTCTTCAAGATTGTTGTTATCGGCGACTCTGCCGTCGGTAAATCTAATCTTCTATCTCGTTACGCACGTAACGAGTTCAGCGCTAACTCCAAGGCGACGATCGGAGTCGAGTTTCAGACGCAGAGCATGGAGATTGAAGGTAAAGAGGTCAAGGCTCAGATTTGGGACACTGCTGGTCAGGAGCGTTTCCGTGCCGTCACTTCCGCTTATTACCGTGGCGCTGTCGGTGCCCTCGTCGTTTACGACATTACCCGCCGCACCACTTTCGAAAGCGTTGGACGTTGGCTCGATGAGCTTAAGATCCATTCGGATACGACGGTGGCGAGAATGCTGGTGGGGAACAAGTGTGATCTAGAAAACATAAGAGCAGTGAGCGTGGAGGAAGGAAAGGCTCTAGCCGAAGAGGAAGGACTCTTCTTTGTGGAAACATCGGCTCTTGATTCGACTAATGTTAAAACAGCTTTCGAGATGGTGATACTTGATATCTACAATAACGTGAGCCGTAAGCAACTCAACTCAGATACTTATAAAGACGAACTCACCGTGAATCGGGTAAGTCTTGTTAAGGATGATAACTCTGCCTCCAAACAAAGCTCTGGTTTCTCTTGTTGTTCTTCCACTTGATGATATACCACACCAAAATAATCCTTTTTTATTTCTCACAACTGTAACTTTATTATATAAATTTTTGTTTTTTTCTTTGACTCATGGAAGAAAAGAAATTCATGAACTGTAATTTATTTGGTCACATTAATTTTCCTTTTATAATTTTGGCAAACATTCAAAAGATCTATTCATTC - >AT1G05810.1
AATATAGAAAAAGAAAAAGGTAACGACATTAAAGAAGGTGCACTTAATGCGCAGTATGTCCTCTTGTGCCAGCTTGTTGCACCGTCTTCCGTCTCCTCCTCTTTCCCTCTCTCTCTCTCTCCAAACCAGTCCTACTTCTCTCTCTAGAAACCTAGGGAAGAAGAAGAAGACGGTGAAGCGAGCGATGTCTTCGGACGACGAAGGAAGAGAGGAGTATCTCTTCAAGATTGTTGTTATCGGCGACTCTGCCGTCGGTAAATCTAATCTTCTATCTCGTTACGCACGTAACGAGTTCAGCGCTAACTCCAAGGCGACGATCGGAGTCGAGTTTCAGACGCAGAGCATGGAGATTGAAGGTAAAGAGGTCAAGGCTCAGATTTGGGACACTGCTGGTCAGGAGCGTTTCCGTGCCGTCACTTCCGCTTATTACCGTGGCGCTGTCGGTGCCCTCGTCGTTTACGACATTACCCGCCGCACCACTTTCGAAAGCGTTGGACGTTGGCTCGATGAGCTTAAGATCCATTCGGATACGACGGTGGCGAGAATGCTGGTGGGGAACAAGTGTGATCTAGAAAACATAAGAGCAGTGAGCGTGGAGGAAGGAAAGGCTCTAGCCGAAGAGGAAGGACTCTTCTTTGTGGAAACATCGGCTCTTGATTCGACTAATGTTAAAACAGCTTTCGAGATGGTGATACTTGATATCTACAATAACGTGAGCCGTAAGCAACTCAACTCAGATACTTATAAAGACGAACTCACCGTGAATCGGGTAAGTCTTGTTAAGGATGATAACTCTGCCTCCAAACAAAGCTCTGGTTTCTCTTGTTGTTCTTCCACTTGATGATATACCACACCAAAATAATCCTTTTTTATTTCTCACAACTGTAACTTTATTATATAAATTTTTGTTTTTTTCTTTGACTCATGGAAGAAAAGAAATTCATGAACTGTAATTTATTTGGTCACATTAATTTTCCTTTTATAATTTTGGCAAACATTCAAAAGATCTATTCATTC
CDS Sequence
- >AT1G05810.2
ATGCGCAGTATGTCCTCTTGTGCCAGCTTGTTGCACCGTCTTCCGTCTCCTCCTCTTTCCCTCTCTCTCTCTCTCCAAACCAGTCCTACTTCTCTCTCTAGAAACCTAGGGAAGAAGAAGAAGACGGTGAAGCGAGCGATGTCTTCGGACGACGAAGGAAGAGAGGAGTATCTCTTCAAGATTGTTGTTATCGGCGACTCTGCCGTCGGTAAATCTAATCTTCTATCTCGTTACGCACGTAACGAGTTCAGCGCTAACTCCAAGGCGACGATCGGAGTCGAGTTTCAGACGCAGAGCATGGAGATTGAAGGTAAAGAGGTCAAGGCTCAGATTTGGGACACTGCTGGTCAGGAGCGTTTCCGTGCCGTCACTTCCGCTTATTACCGTGGCGCTGTCGGTGCCCTCGTCGTTTACGACATTACCCGCCGCACCACTTTCGAAAGCGTTGGACGTTGGCTCGATGAGCTTAAGATCCATTCGGATACGACGGTGGCGAGAATGCTGGTGGGGAACAAGTGTGATCTAGAAAACATAAGAGCAGTGAGCGTGGAGGAAGGAAAGGCTCTAGCCGAAGAGGAAGGACTCTTCTTTGTGGAAACATCGGCTCTTGATTCGACTAATGTTAAAACAGCTTTCGAGATGGTGATACTTGATATCTACAATAACGTGAGCCGTAAGCAACTCAACTCAGATACTTATAAAGACGAACTCACCGTGAATCGGGTAAGTCTTGTTAAGGATGATAACTCTGCCTCCAAACAAAGCTCTGGTTTCTCTTGTTGTTCTTCCACTTGA - >AT1G05810.1
ATGCGCAGTATGTCCTCTTGTGCCAGCTTGTTGCACCGTCTTCCGTCTCCTCCTCTTTCCCTCTCTCTCTCTCTCCAAACCAGTCCTACTTCTCTCTCTAGAAACCTAGGGAAGAAGAAGAAGACGGTGAAGCGAGCGATGTCTTCGGACGACGAAGGAAGAGAGGAGTATCTCTTCAAGATTGTTGTTATCGGCGACTCTGCCGTCGGTAAATCTAATCTTCTATCTCGTTACGCACGTAACGAGTTCAGCGCTAACTCCAAGGCGACGATCGGAGTCGAGTTTCAGACGCAGAGCATGGAGATTGAAGGTAAAGAGGTCAAGGCTCAGATTTGGGACACTGCTGGTCAGGAGCGTTTCCGTGCCGTCACTTCCGCTTATTACCGTGGCGCTGTCGGTGCCCTCGTCGTTTACGACATTACCCGCCGCACCACTTTCGAAAGCGTTGGACGTTGGCTCGATGAGCTTAAGATCCATTCGGATACGACGGTGGCGAGAATGCTGGTGGGGAACAAGTGTGATCTAGAAAACATAAGAGCAGTGAGCGTGGAGGAAGGAAAGGCTCTAGCCGAAGAGGAAGGACTCTTCTTTGTGGAAACATCGGCTCTTGATTCGACTAATGTTAAAACAGCTTTCGAGATGGTGATACTTGATATCTACAATAACGTGAGCCGTAAGCAACTCAACTCAGATACTTATAAAGACGAACTCACCGTGAATCGGGTAAGTCTTGTTAAGGATGATAACTCTGCCTCCAAACAAAGCTCTGGTTTCTCTTGTTGTTCTTCCACTTGA
Protein Sequence
- >AT1G05810.2
MRSMSSCASLLHRLPSPPLSLSLSLQTSPTSLSRNLGKKKKTVKRAMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCSST - >AT1G05810.1
MRSMSSCASLLHRLPSPPLSLSLSLQTSPTSLSRNLGKKKKTVKRAMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCSST