Information report for AT1G05620
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , plant sperm cell , guard cell
Literature and News
- The blue light receptor cryptochrome 1 can act independently of phytochrome A and B in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00322.x ; PMID: 9881166
- Genetic identification of FIN2, a far red light-specific signaling component of Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00307.x ; PMID: 9881161
- Multiple photoreceptors mediate the light-induced reduction of GUS-COP1 from Arabidopsis hypocotyl nuclei. DOI: 10.1046/j.1365-313x.1998.00290.x ; PMID: 9839465
- Phytochromes and cryptochromes in the entrainment of the Arabidopsis circadian clock. DOI: 10.1126/science.282.5393.1488 ; PMID: 9822379
- Phytochromes and photomorphogenesis in Arabidopsis. DOI: 10.1098/rstb.1998.0300 ; PMID: 9800208
- UV-B-induced photomorphogenesis in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00246.x ; PMID: 9778848
- Combinatorial interaction of light-responsive elements plays a critical role in determining the response characteristics of light-regulated promoters in Arabidopsis. DOI: 10.1046/j.1365-313x.1998.00180.x ; PMID: 9744096
Gene Resources
- UniProt: A0A5S9STJ4
- EMBL: CACSHJ010000087, LR881466
- AlphaFoldDB: A0A5S9STJ4
- EnsemblPlants: AT1G05620.1
- Gramene: AT1G05620.1
- KEGG: ath:AT1G05620
- Orthologous matrix: HMHDPFA
- ExpressionAtlas: AT1G05620
- InterPro: IPR001910, IPR023186, IPR036452
- PANTHER: PTHR12304, PTHR12304:SF4
- SUPFAM: SSF53590
- Gene3D: 3.90.245.10
- OrthoDB: A0A5S9STJ4
- SWISS-MODEL: A0A5S9STJ4
- Conserved Domain Database: cd02650
Sequences
cDNA Sequence
- >AT1G05620.1
ATTTTTCTCTAAACCAAAATGACATGGACCAAGTGGTAAAAAATCACACAGAACCGGTAGAAACTTTGTTGAGAAAATCTCTGTTGCCAAAGCATCATCATCTCTAATGTAGTAGATCCGTCGAGAGTAAGAACTCTGACTAGAAAAATATGGAAAGAGATAATGGAAAACGTGACTGAATAAAATTCGATTTGTTTATACAATAACAAACCCACGTTTGTAGACTTGGAAAAGAGACACCTTTTATTTTTTTTTATGAACTCTTTGGTGCTAGATCATAATTGTATTCCAAAAGTTTTTTCTGTTGTGTGTAAAAAGCCCGGATTTAGAGAGAGATTTAGTTTTTTTTTTTTTTCCGGCACTTGGGTCCTTCAAAGTCTCCGCCTTCTGCCGTGTTGAAGTTCGATGGCGATAGGAGACCGCAAGAAGATTATCATCGATACTGATCCTGGAATCGATGATGCAATGGCGATATTCGTAGCTTTAAATTCACCTGAAGTTGATGTCATTGGCCTCACTACTATCTTTGGAAACGTGTATACCACTCTCGCCACTCGAAACGCCTTGCATTTGTTGGAGGTTGCGGGTAGGACCGATATTCCGGTGGCTGAAGGAACACATAAAACCTTCTTGAACGATACGAAGCTTCGAATAGCTGACTTTGTTCATGGAAAAGATGGGCTTGGCAACCAAAACTTCCCTCCACCTAAAGGAAAACCAATTGAAAAGTCTGGACCTGAGTTTTTAGTTGAACAAGCAAAGCTTTGCCCTGGTGAAATCACGGTTGTTGCTTTGGGACCACTAACAAATCTCGCGTTGGCTGTTCAGCTTGATCCAGAGTTTTCGAAAAATGTCGGACAAATTGTTCTTCTTGGTGGAGCATTTGCAGTAAACGGAAATGTAAATCCAGCTTCGGAAGCTAATATTTTTGGCGATCCCGAAGCTGCAGATATTGTGTTCACATGTGGGGCCGATATAATTGCTGTGGGAATCAATGTGACCCATCAAGTTATTATGACAGCTGATGACAAGGACAAACTAGCATCATCGAAGGGGAAATTAGCTCAATATCTCTGTAAAATCCTTGATGTGTACTATGATTATCATCTCACGGCTTACGAAATCAAAGGTGTGTACCTTCATGATCCTGCGACGATCCTTGCGGCTTTCCTTCCTTCTCTATTCACTTATACAGAAGGAGTTGCTAGAGTGCAGACAAGTGGTATCACTAGGGGACTCACTTTACTGTACAACAATCTTAAGAGGTTTGAGGAAGCGAACGAGTGGTCAGACAAACCAACGGTAAAAGTGGCAGTGACGGTTGATGCTCCTGCAGTCGTGAAGCTCATAATGGATAGGCTTATGGAGTCTTAAACCATCTTGGGTCGTTAATTAGTTATCTCTTTCTCTTTGATGTTTCACTATTGCGAGCCATTTCTCTTGTTAAAAATAAGGCTCCTCTTGCTGCATTATTTATTTATTGTTTAATCTTTATTAAAACGAATATTATTATGTTACCAATTACCAATAATAAAGTTAAGATTTTTCCTCCGATTC - >AT1G05620.2
ATTTTTCTCTAAACCAAAATGACATGGACCAAGTGGTAAAAAATCACACAGAACCGGTAGAAACTTTGTTGAGAAAATCTCTGTTGCCAAAGCATCATCATCTCTAATGTAGTAGATCCGTCGAGAGTAAGAACTCTGACTAGAAAAATATGGAAAGAGATAATGGAAAACGTGACTGAATAAAATTCGATTTGTTTATACAATAACAAACCCACGTTTGTAGACTTGGAAAAGAGACACCTTTTATTTTTTTTTATGAACTCTTTGGTGCTAGATCATAATTGTATTCCAAAAGTTTTTTCTGTTGTGTGTAAAAAGCCCGGATTTAGAGAGAGATTTAGTTTTTTTTTTTTTTCCGGCACTTGGGTCCTTCAAAGTCTCCGCCTTCTGCCGTGTTGAAGTTCGATGGCGATAGGAGACCGCAAGAAGATTATCATCGATACTGATCCTGGAATCGATGATGCAATGGCGATATTCGTAGCTTTAAATTCACCTGAAGTTGATGTCATTGGCCTCACTACTATCTTTGGAAACGTGTATACCACTCTCGCCACTCGAAACGCCTTGCATTTGTTGGAGGTTGCGGGTAGGACCGATATTCCGGTGGCTGAAGGAACACATAAAACCTTCTTGAACGATACGAAGCTTCGAATAGCTGACTTTGTTCATGGAAAAGATGGGCTTGGCAACCAAAACTTCCCTCCACCTAAAGGAAAACCAATTGAAAAGTCTGGACCTGAGTTTTTAGTTGAACAAGCAAAGCTTTGCCCTGGTGAAATCACGGTTGTTGCTTTGGGACCACTAACAAATCTCGCGTTGGCTGTTCAGCTTGATCCAGAGTTTTCGAAAAATGTCGGACAAATTGTTCTTCTTGGTGGAGCATTTGCAGTAAACGGAAATGTAAATCCAGCTTCGGAAGCTAATATTTTTGGCGATCCCGAAGCTGCAGATATTGTGTTCACATGTGGGGCCGATATAATTGCTGTGGGAATCAATGTGACCCATCAAGTTATTATGACAGCTGATGACAAGGACAAACTAGCATCATCGAAGGGGAAATTAGCTCAATATCTCTGTAAAATCCTTGATGTGTACTATGATTATCATCTCACGGCTTACGAAATCAAAGGTGTGTACCTTCATGATCCTGCGACGATCCTTGCGGCTTTCCTTCCTTCTCTATTCACTTATACAGAAGGAGTTGCTAGAGTGCAGACAAGTGGTATCACTAGGGGACTCACTTTACTGTACAACAATCTTAAGAGGTTTGAGGAAGCGAACGAGTGGTCAGACAAACCAACGGTAAAAGTGGCAGTGACGGTTGATGCTCCTGCAGTCGTGAAGCTCATAATGGATAGGCTTATGGAGTCTTAAACCATCTTGGGTCGTTAATTAGTTATCTCTTTCTCTTTGATGTTTCACTATTGCGAGCCATTTCTCTTGTTAAAAATAAGGCTCCTCTTGCTGCATTATTTATTTATTGTTTAATCTTTATTAAAACGAATATTATTATGTTACCAATTACCAATAATAAAGTTAAGATTTTTCCTCCGATTC
CDS Sequence
- >AT1G05620.1
ATGGCGATAGGAGACCGCAAGAAGATTATCATCGATACTGATCCTGGAATCGATGATGCAATGGCGATATTCGTAGCTTTAAATTCACCTGAAGTTGATGTCATTGGCCTCACTACTATCTTTGGAAACGTGTATACCACTCTCGCCACTCGAAACGCCTTGCATTTGTTGGAGGTTGCGGGTAGGACCGATATTCCGGTGGCTGAAGGAACACATAAAACCTTCTTGAACGATACGAAGCTTCGAATAGCTGACTTTGTTCATGGAAAAGATGGGCTTGGCAACCAAAACTTCCCTCCACCTAAAGGAAAACCAATTGAAAAGTCTGGACCTGAGTTTTTAGTTGAACAAGCAAAGCTTTGCCCTGGTGAAATCACGGTTGTTGCTTTGGGACCACTAACAAATCTCGCGTTGGCTGTTCAGCTTGATCCAGAGTTTTCGAAAAATGTCGGACAAATTGTTCTTCTTGGTGGAGCATTTGCAGTAAACGGAAATGTAAATCCAGCTTCGGAAGCTAATATTTTTGGCGATCCCGAAGCTGCAGATATTGTGTTCACATGTGGGGCCGATATAATTGCTGTGGGAATCAATGTGACCCATCAAGTTATTATGACAGCTGATGACAAGGACAAACTAGCATCATCGAAGGGGAAATTAGCTCAATATCTCTGTAAAATCCTTGATGTGTACTATGATTATCATCTCACGGCTTACGAAATCAAAGGTGTGTACCTTCATGATCCTGCGACGATCCTTGCGGCTTTCCTTCCTTCTCTATTCACTTATACAGAAGGAGTTGCTAGAGTGCAGACAAGTGGTATCACTAGGGGACTCACTTTACTGTACAACAATCTTAAGAGGTTTGAGGAAGCGAACGAGTGGTCAGACAAACCAACGGTAAAAGTGGCAGTGACGGTTGATGCTCCTGCAGTCGTGAAGCTCATAATGGATAGGCTTATGGAGTCTTAA - >AT1G05620.2
ATGGCGATAGGAGACCGCAAGAAGATTATCATCGATACTGATCCTGGAATCGATGATGCAATGGCGATATTCGTAGCTTTAAATTCACCTGAAGTTGATGTCATTGGCCTCACTACTATCTTTGGAAACGTGTATACCACTCTCGCCACTCGAAACGCCTTGCATTTGTTGGAGGTTGCGGGTAGGACCGATATTCCGGTGGCTGAAGGAACACATAAAACCTTCTTGAACGATACGAAGCTTCGAATAGCTGACTTTGTTCATGGAAAAGATGGGCTTGGCAACCAAAACTTCCCTCCACCTAAAGGAAAACCAATTGAAAAGTCTGGACCTGAGTTTTTAGTTGAACAAGCAAAGCTTTGCCCTGGTGAAATCACGGTTGTTGCTTTGGGACCACTAACAAATCTCGCGTTGGCTGTTCAGCTTGATCCAGAGTTTTCGAAAAATGTCGGACAAATTGTTCTTCTTGGTGGAGCATTTGCAGTAAACGGAAATGTAAATCCAGCTTCGGAAGCTAATATTTTTGGCGATCCCGAAGCTGCAGATATTGTGTTCACATGTGGGGCCGATATAATTGCTGTGGGAATCAATGTGACCCATCAAGTTATTATGACAGCTGATGACAAGGACAAACTAGCATCATCGAAGGGGAAATTAGCTCAATATCTCTGTAAAATCCTTGATGTGTACTATGATTATCATCTCACGGCTTACGAAATCAAAGGTGTGTACCTTCATGATCCTGCGACGATCCTTGCGGCTTTCCTTCCTTCTCTATTCACTTATACAGAAGGAGTTGCTAGAGTGCAGACAAGTGGTATCACTAGGGGACTCACTTTACTGTACAACAATCTTAAGAGGTTTGAGGAAGCGAACGAGTGGTCAGACAAACCAACGGTAAAAGTGGCAGTGACGGTTGATGCTCCTGCAGTCGTGAAGCTCATAATGGATAGGCTTATGGAGTCTTAA
Protein Sequence
- >AT1G05620.1
MAIGDRKKIIIDTDPGIDDAMAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDIPVAEGTHKTFLNDTKLRIADFVHGKDGLGNQNFPPPKGKPIEKSGPEFLVEQAKLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIVFTCGADIIAVGINVTHQVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVYLHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAVTVDAPAVVKLIMDRLMES - >AT1G05620.2
MAIGDRKKIIIDTDPGIDDAMAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDIPVAEGTHKTFLNDTKLRIADFVHGKDGLGNQNFPPPKGKPIEKSGPEFLVEQAKLCPGEITVVALGPLTNLALAVQLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIVFTCGADIIAVGINVTHQVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVYLHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAVTVDAPAVVKLIMDRLMES