Information report for AT1G05610
Gene Details
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Functional Descriptions
- PO:0000071 — companion cell — célula acompañiante (Spanish, exact), minor vein companion cell (exact), 伴細胞 (Japanese, exact)
- PO:0005645 — leaf mesophyll — mesófilo de la hoja (Spanish, exact), 葉の葉肉 (Japanese, exact) (exact), foliage leaf mesophyll (related), leaf parenchyma (related)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0009062 — gynoecium — ginoecio (Spanish, exact), gynaecium (exact), gynoecia (exact, plural), 雌蕊群 (Japanese, exact), Poaceae gynoecium (narrow), Zea gynoecium (narrow), apocarpous gynoecium (narrow), gynoecium of ear floret (narrow), gynoecium of lower floret of pedicellate spikelet of ear (narrow), gynoecium of lower floret of pedicellate spikelet of tassel (narrow), gynoecium of lower floret of sessile spikelet of ear (narrow), gynoecium of lower floret of sessile spikelet of tassel (narrow), gynoecium of tassel floret (narrow), gynoecium of upper floret of pedicellate spikelet of ear (narrow), gynoecium of upper floret of pedicellate spikelet of tassel (narrow), gynoecium of upper floret of sessile spikelet of ear (narrow), gynoecium of upper floret of sessile spikelet of tassel (narrow), syncarpous gynoecium (narrow), pistil (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- companion cell , leaf mesophyll , fruit , root , vascular leaf , stamen , inflorescence , gynoecium , carpel , guard cell
Literature and News
- A simple, rapid and quantitative method for preparing Arabidopsis protein extracts for immunoblot analysis. DOI: 10.1046/j.1365-313x.1999.00579.x ; PMID: 10571885
- Sequential and coordinated action of phytochromes A and B during Arabidopsis stem growth revealed by kinetic analysis. DOI: 10.1073/pnas.96.24.14142 ; PMID: 10570212
- Phytochrome signalling is mediated through nucleoside diphosphate kinase 2. DOI: 10.1038/44176 ; PMID: 10524631
- Dynamic properties of endogenous phytochrome A in Arabidopsis seedlings. DOI: 10.1104/pp.121.2.571 ; PMID: 10517849
- Blue light-directed destabilization of the pea Lhcb1*4 transcript depends on sequences within the 5' untranslated region. DOI: 10.1105/tpc.11.8.1579 ; PMID: 10449589
- The FAR1 locus encodes a novel nuclear protein specific to phytochrome A signaling. DOI: 10.1101/gad.13.15.2017 ; PMID: 10444599
- Regulation of phytochrome B signaling by phytochrome A and FHY1 in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1999.00475.x ; PMID: 10417700
- The system of phytochromes: photobiophysics and photobiochemistry in vivo. DOI: NA ; PMID: 10379648
- PKS1, a substrate phosphorylated by phytochrome that modulates light signaling in Arabidopsis. DOI: 10.1126/science.284.5419.1539 ; PMID: 10348744
- SPA1, a WD-repeat protein specific to phytochrome A signal transduction. DOI: 10.1126/science.284.5413.496 ; PMID: 10205059
- Overexpression of Arabidopsis phytochrome B inhibits phytochrome A function in the presence of sucrose. DOI: 10.1104/pp.119.4.1497 ; PMID: 10198109
- Overexpression of rice phytochrome A partially complements phytochrome B deficiency in Arabidopsis. DOI: 10.1007/s004250050498 ; PMID: 9951735
Gene Resources
- UniProt: A0A1P8ATP5
- EMBL: CP002684
- AlphaFoldDB: A0A1P8ATP5
- EnsemblPlants: AT1G05610.2
- Gramene: AT1G05610.2
- ExpressionAtlas: AT1G05610
- InterPro: IPR005835, IPR005836, IPR011004
- PANTHER: PTHR43523, PTHR43523:SF17
- SUPFAM: SSF51161, SSF53448
- PROSITE: PS00809
- Gene3D: 2.160.10.10, 3.90.550.10
- OrthoDB: A0A1P8ATP5
- SWISS-MODEL: A0A1P8ATP5
- Conserved Domain Database: cd02508, cd04651
Homologs
- Daucus carota DCAR_013816
- Gossypium hirsutum Gohir.A07G194100
- Nicotiana attenuata A4A49_03668
- Triticum aestivum TaAGPS, TraesCS7A02G287400
Sequences
cDNA Sequence
- >AT1G05610.2
AAAATGTCGGACGATTTTCACCATCACACGTTTCAATCTCGAAAACAAAAACGAGCACTTTATCTCCTCAAATCTCAAACCCAATTTTCTTGTTTCTTGAATCATCTCTGCTCATAATCGAAAATGCAGATTTCTTCTTCTTCTTTTATTACCAAATTTACCAATCTCCATATGGTAAGATCGACTAGTGATCATCATCAATGGAGACATAACTATAACTTGAAGCAGCTTTTCATTCCAAACCTCTCTGTTTCAAACTCTCAGCACCTTCCTTTGAACCAGAGTGTTGCGGCCATTGTGTTCGGAGGAGGATCAGATTCTGAGCTTTATCCACTTACCAAAACAAGATCCAAAGGAGCAATCCCTATTGCAGCAAACTATAGACTTATTGATGCAGTCATCAGTAATTGCATCAACAGTGGCATCACCAAGATCTATGCAATCACTCAGTTTAATTCCACTTCTCTCAATTCACATCTCTCCAAAGCTTACAGTGGATTTGGACTCGGAAAAGACAGATTCGTTGAAGTCATTGCCGCTTATCAGAGCCTAGAAGATCAAGGATGGTTTCAGGGAACTGCTGATGCGATAAGAAGATGCTTGTGGGTATTTGAAGAGTTTCCAGTTACAGAGTTCTTGGTTCTTCCTGGGCATCATCTATACAAAATGGATTATAAGATGCTAATCGAAGATCATAGAAGAAGCAGAGCGGATATAACCATTGTTGGACTAAGCTCTGTTACAGACCATGACTTTGGTTTCGGTTTCATGGAAGTTGATTCCACAAATGCTGTCACTAGATTCACTATCAAGGGTCAACAAGATTTAATCTCTGTGGCGAACAGAACAGCGACAAGAAGTGATGGAACGTCTTCTTGCTCTGTCCCAAGCGCAGGAATTTACGTGATCGGTCGAGAACAGATGGTGAAGCTTCTGAGAGAATGTTTAATAAAATCGAAAGACTTGGCCAGCGAAATCATTCCTGGTGCGATCTCTGAAGGAATGAAGGTGAAAGCTCATATGTTTGATGGATATTGGGAAGATGTGAGGAGCATTGGAGCTTACTATAGAGCTAACATGGAGAGTATTAAGAGGTGTAGATTGGATCTCAATTACAGATTCTACGACAGACAATGTCCTCTGTACACAATGCCTCGGTGTTTGCCTCCAAGCTCCATGAGTGTAGCTGTAATAACCAACAGTATTATCGGAGACGGGTGCATTCTAGATAAATGTGTCATCAGAGGATCGGTGGTTGGAATGAGAACAAGAATCGCTGATGAAGTGATTGTAGAGGATTCGATCATTGTCGGTTCTGATATTTATGAGATGGAAGAAGATGTGAGAAGAAAAGGGAAGGAGAAGAAGATAGAGATTCGAATAGGGATCGGTGAAAAGAGTCGAATAAGACGAGCCATTGTTGATAAAAATGCCAGGATTGGTAAAAACGTTATGATAATCAACAGAGACAATGTTGAAGAAGGAAACCGAGAAGCTCAAGGATACGTAATAAGAGAAGGAATCATTATCATACTTCGAAACGCAGTGATCCCGAACGACTCCATCCTCTGATTTTTTTCCTATTTTACAAAATCCATCATTTTTC - >AT1G05610.1
AAAATGTCGGACGATTTTCACCATCACACGTTTCAATCTCGAAAACAAAAACGAGCACTTTATCTCCTCAAATCTCAAACCCAATTTTCTTGTTTCTTGAATCATCTCTGCTCATAATCGAAAATGCAGATTTCTTCTTCTTCTTTTATTACCAAATTTACCAATCTCCATATGGTAAGATCGACTAGTGATCATCATCAATGGAGACATAACTATAACTTGAAGCAGCTTTTCATTCCAAACCTCTCTGTTTCAAACTCTCAGCACCTTCCTTTGAACCAGAGTGTTGCGGCCATTGTGTTCGGAGGAGGATCAGATTCTGAGCTTTATCCACTTACCAAAACAAGATCCAAAGGAGCAATCCCTATTGCAGCAAACTATAGACTTATTGATGCAGTCATCAGTAATTGCATCAACAGTGGCATCACCAAGATCTATGCAATCACTCAGTTTAATTCCACTTCTCTCAATTCACATCTCTCCAAAGCTTACAGTGGATTTGGACTCGGAAAAGACAGATTCGTTGAAGTCATTGCCGCTTATCAGAGCCTAGAAGATCAAGGATGGTTTCAGGGAACTGCTGATGCGATAAGAAGATGCTTGTGGGTATTTGAAGAGTTTCCAGTTACAGAGTTCTTGGTTCTTCCTGGGCATCATCTATACAAAATGGATTATAAGATGCTAATCGAAGATCATAGAAGAAGCAGAGCGGATATAACCATTGTTGGACTAAGCTCTGTTACAGACCATGACTTTGGTTTCGGTTTCATGGAAGTTGATTCCACAAATGCTGTCACTAGATTCACTATCAAGGGTCAACAAGATTTAATCTCTGTGGCGAACAGAACAGCGACAAGAAGTGATGGAACGTCTTCTTGCTCTGTCCCAAGCGCAGGAATTTACGTGATCGGTCGAGAACAGATGGTGAAGCTTCTGAGAGAATGTTTAATAAAATCGAAAGACTTGGCCAGCGAAATCATTCCTGGTGCGATCTCTGAAGGAATGAAGGTGAAAGCTCATATGTTTGATGGATATTGGGAAGATGTGAGGAGCATTGGAGCTTACTATAGAGCTAACATGGAGAGTATTAAGAGGTGTAGATTGGATCTCAATTACAGATTCTACGACAGACAATGTCCTCTGTACACAATGCCTCGGTGTTTGCCTCCAAGCTCCATGAGTGTAGCTGTAATAACCAACAGTATTATCGGAGACGGGTGCATTCTAGATAAATGTGTCATCAGAGGATCGGTGGTTGGAATGAGAACAAGAATCGCTGATGAAGTGATTGTAGAGGATTCGATCATTGTCGGTTCTGATATTTATGAGATGGAAGAAGATGTGAGAAGAAAAGGGAAGGAGAAGAAGATAGAGATTCGAATAGGGATCGGTGAAAAGAGTCGAATAAGACGAGCCATTGTTGATAAAAATGCCAGGATTGGTAAAAACGTTATGATAATCAACAGAGACAATGTTGAAGAAGGAAACCGAGAAGCTCAAGGATACGTAATAAGAGAAGGAATCATTATCATACTTCGAAACGCAGTGATCCCGAACGACTCCATCCTCTGATTTTTTTCCTATTTTACAAAATCCATCATTTTTC
CDS Sequence
- >AT1G05610.2
ATGCAGATTTCTTCTTCTTCTTTTATTACCAAATTTACCAATCTCCATATGGTAAGATCGACTAGTGATCATCATCAATGGAGACATAACTATAACTTGAAGCAGCTTTTCATTCCAAACCTCTCTGTTTCAAACTCTCAGCACCTTCCTTTGAACCAGAGTGTTGCGGCCATTGTGTTCGGAGGAGGATCAGATTCTGAGCTTTATCCACTTACCAAAACAAGATCCAAAGGAGCAATCCCTATTGCAGCAAACTATAGACTTATTGATGCAGTCATCAGTAATTGCATCAACAGTGGCATCACCAAGATCTATGCAATCACTCAGTTTAATTCCACTTCTCTCAATTCACATCTCTCCAAAGCTTACAGTGGATTTGGACTCGGAAAAGACAGATTCGTTGAAGTCATTGCCGCTTATCAGAGCCTAGAAGATCAAGGATGGTTTCAGGGAACTGCTGATGCGATAAGAAGATGCTTGTGGGTATTTGAAGAGTTTCCAGTTACAGAGTTCTTGGTTCTTCCTGGGCATCATCTATACAAAATGGATTATAAGATGCTAATCGAAGATCATAGAAGAAGCAGAGCGGATATAACCATTGTTGGACTAAGCTCTGTTACAGACCATGACTTTGGTTTCGGTTTCATGGAAGTTGATTCCACAAATGCTGTCACTAGATTCACTATCAAGGGTCAACAAGATTTAATCTCTGTGGCGAACAGAACAGCGACAAGAAGTGATGGAACGTCTTCTTGCTCTGTCCCAAGCGCAGGAATTTACGTGATCGGTCGAGAACAGATGGTGAAGCTTCTGAGAGAATGTTTAATAAAATCGAAAGACTTGGCCAGCGAAATCATTCCTGGTGCGATCTCTGAAGGAATGAAGGTGAAAGCTCATATGTTTGATGGATATTGGGAAGATGTGAGGAGCATTGGAGCTTACTATAGAGCTAACATGGAGAGTATTAAGAGGTGTAGATTGGATCTCAATTACAGATTCTACGACAGACAATGTCCTCTGTACACAATGCCTCGGTGTTTGCCTCCAAGCTCCATGAGTGTAGCTGTAATAACCAACAGTATTATCGGAGACGGGTGCATTCTAGATAAATGTGTCATCAGAGGATCGGTGGTTGGAATGAGAACAAGAATCGCTGATGAAGTGATTGTAGAGGATTCGATCATTGTCGGTTCTGATATTTATGAGATGGAAGAAGATGTGAGAAGAAAAGGGAAGGAGAAGAAGATAGAGATTCGAATAGGGATCGGTGAAAAGAGTCGAATAAGACGAGCCATTGTTGATAAAAATGCCAGGATTGGTAAAAACGTTATGATAATCAACAGAGACAATGTTGAAGAAGGAAACCGAGAAGCTCAAGGATACGTAATAAGAGAAGGAATCATTATCATACTTCGAAACGCAGTGATCCCGAACGACTCCATCCTCTGA - >AT1G05610.1
ATGCAGATTTCTTCTTCTTCTTTTATTACCAAATTTACCAATCTCCATATGGTAAGATCGACTAGTGATCATCATCAATGGAGACATAACTATAACTTGAAGCAGCTTTTCATTCCAAACCTCTCTGTTTCAAACTCTCAGCACCTTCCTTTGAACCAGAGTGTTGCGGCCATTGTGTTCGGAGGAGGATCAGATTCTGAGCTTTATCCACTTACCAAAACAAGATCCAAAGGAGCAATCCCTATTGCAGCAAACTATAGACTTATTGATGCAGTCATCAGTAATTGCATCAACAGTGGCATCACCAAGATCTATGCAATCACTCAGTTTAATTCCACTTCTCTCAATTCACATCTCTCCAAAGCTTACAGTGGATTTGGACTCGGAAAAGACAGATTCGTTGAAGTCATTGCCGCTTATCAGAGCCTAGAAGATCAAGGATGGTTTCAGGGAACTGCTGATGCGATAAGAAGATGCTTGTGGGTATTTGAAGAGTTTCCAGTTACAGAGTTCTTGGTTCTTCCTGGGCATCATCTATACAAAATGGATTATAAGATGCTAATCGAAGATCATAGAAGAAGCAGAGCGGATATAACCATTGTTGGACTAAGCTCTGTTACAGACCATGACTTTGGTTTCGGTTTCATGGAAGTTGATTCCACAAATGCTGTCACTAGATTCACTATCAAGGGTCAACAAGATTTAATCTCTGTGGCGAACAGAACAGCGACAAGAAGTGATGGAACGTCTTCTTGCTCTGTCCCAAGCGCAGGAATTTACGTGATCGGTCGAGAACAGATGGTGAAGCTTCTGAGAGAATGTTTAATAAAATCGAAAGACTTGGCCAGCGAAATCATTCCTGGTGCGATCTCTGAAGGAATGAAGGTGAAAGCTCATATGTTTGATGGATATTGGGAAGATGTGAGGAGCATTGGAGCTTACTATAGAGCTAACATGGAGAGTATTAAGAGGTGTAGATTGGATCTCAATTACAGATTCTACGACAGACAATGTCCTCTGTACACAATGCCTCGGTGTTTGCCTCCAAGCTCCATGAGTGTAGCTGTAATAACCAACAGTATTATCGGAGACGGGTGCATTCTAGATAAATGTGTCATCAGAGGATCGGTGGTTGGAATGAGAACAAGAATCGCTGATGAAGTGATTGTAGAGGATTCGATCATTGTCGGTTCTGATATTTATGAGATGGAAGAAGATGTGAGAAGAAAAGGGAAGGAGAAGAAGATAGAGATTCGAATAGGGATCGGTGAAAAGAGTCGAATAAGACGAGCCATTGTTGATAAAAATGCCAGGATTGGTAAAAACGTTATGATAATCAACAGAGACAATGTTGAAGAAGGAAACCGAGAAGCTCAAGGATACGTAATAAGAGAAGGAATCATTATCATACTTCGAAACGCAGTGATCCCGAACGACTCCATCCTCTGA
Protein Sequence
- >AT1G05610.2
MQISSSSFITKFTNLHMVRSTSDHHQWRHNYNLKQLFIPNLSVSNSQHLPLNQSVAAIVFGGGSDSELYPLTKTRSKGAIPIAANYRLIDAVISNCINSGITKIYAITQFNSTSLNSHLSKAYSGFGLGKDRFVEVIAAYQSLEDQGWFQGTADAIRRCLWVFEEFPVTEFLVLPGHHLYKMDYKMLIEDHRRSRADITIVGLSSVTDHDFGFGFMEVDSTNAVTRFTIKGQQDLISVANRTATRSDGTSSCSVPSAGIYVIGREQMVKLLRECLIKSKDLASEIIPGAISEGMKVKAHMFDGYWEDVRSIGAYYRANMESIKRCRLDLNYRFYDRQCPLYTMPRCLPPSSMSVAVITNSIIGDGCILDKCVIRGSVVGMRTRIADEVIVEDSIIVGSDIYEMEEDVRRKGKEKKIEIRIGIGEKSRIRRAIVDKNARIGKNVMIINRDNVEEGNREAQGYVIREGIIIILRNAVIPNDSIL - >AT1G05610.1
MQISSSSFITKFTNLHMVRSTSDHHQWRHNYNLKQLFIPNLSVSNSQHLPLNQSVAAIVFGGGSDSELYPLTKTRSKGAIPIAANYRLIDAVISNCINSGITKIYAITQFNSTSLNSHLSKAYSGFGLGKDRFVEVIAAYQSLEDQGWFQGTADAIRRCLWVFEEFPVTEFLVLPGHHLYKMDYKMLIEDHRRSRADITIVGLSSVTDHDFGFGFMEVDSTNAVTRFTIKGQQDLISVANRTATRSDGTSSCSVPSAGIYVIGREQMVKLLRECLIKSKDLASEIIPGAISEGMKVKAHMFDGYWEDVRSIGAYYRANMESIKRCRLDLNYRFYDRQCPLYTMPRCLPPSSMSVAVITNSIIGDGCILDKCVIRGSVVGMRTRIADEVIVEDSIIVGSDIYEMEEDVRRKGKEKKIEIRIGIGEKSRIRRAIVDKNARIGKNVMIINRDNVEEGNREAQGYVIREGIIIILRNAVIPNDSIL