Information report for AT1G05260
Gene Details
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Functional Descriptions
- PO:0005059 — root endodermis — endodermis de la raíz (Spanish, exact), 根内皮 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- A SNP associated with alternative splicing of RPT5b causes unequal redundancy between RPT5a and RPT5b among Arabidopsis thaliana natural variation. DOI: 10.1186/1471-2229-10-158 ; PMID: 20682047
- Arabidopsis RPT2a encoding the 26S proteasome subunit is required for various aspects of root meristem maintenance, and regulates gametogenesis redundantly with its homolog, RPT2b. DOI: 10.1093/pcp/pcr093 ; PMID: 21784786
- Extracellular ATP functions as an endogenous external metabolite regulating plant cell viability. DOI: 10.1105/tpc.105.036806 ; PMID: 16199612
- A plethora of plant serine/arginine-rich proteins: redundancy or evolution of novel gene functions? DOI: 10.1042/BST0320561 ; PMID: 15270675
- Survey of conserved alternative splicing events of mRNAs encoding SR proteins in land plants. DOI: 10.1093/molbev/msj118 ; PMID: 16520337
- Potent induction of Arabidopsis thaliana flowering by elevated growth temperature. DOI: 10.1371/journal.pgen.0020106 ; PMID: 16839183
- Interactions of SR45, an SR-like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing. DOI: 10.1111/j.1365-313X.2012.05042.x ; PMID: 22563826
- Subcellular Compartmentation of Alternatively Spliced Transcripts Defines SERINE/ARGININE-RICH PROTEIN30 Expression. DOI: 10.1104/pp.17.01260 ; PMID: 29496883
- Alternative Splicing Regulation During Light-Induced Germination of Arabidopsis thaliana Seeds. DOI: 10.3389/fpls.2019.01076 ; PMID: 31552074
- PICLN modulates alternative splicing and light/temperature responses in plants. DOI: 10.1093/plphys/kiac527 ; PMID: 36423226
- Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms. DOI: 10.1104/pp.013086 ; PMID: 12529520
- Expression, localisation and phylogeny of a novel family of plant-specific membrane proteins. DOI: 10.1111/j.1438-8677.2010.00381.x ; PMID: 20712629
- A DMP-triggered in vivo maternal haploid induction system in the dicotyledonous Arabidopsis. DOI: 10.1038/s41477-020-0658-7 ; PMID: 32415294
Gene Resources
- UniProt: Q0WSR2
- EMBL: AK227859
- AlphaFoldDB: Q0WSR2
- EnsemblPlants: AT1G05260.1
- Gramene: AT1G05260.1
- KEGG: ath:AT1G05260
- Orthologous matrix: RLFNNQG
- ExpressionAtlas: AT1G05260
Homologs
- Lactuca sativa Lsat_1_v5_gn_3_91640
- Oryza sativa OsPOX1;ddOs319, POX3006;prx114, POXA;prx126, POXN;prx38, POXGX9;prx112, POX5.1;prx113, OsPrx30, POX8.1;prx110, POX22.3
Sequences
cDNA Sequence
- >AT1G05260.1
CACACAACATAATCCTCCCAAACAGAGAGAGTCTCAAAAATTAAACCAACAAATTTAAAGATGAATTGCTTGATAGCTATAGCTCTTTCAGTCTCTTTCTTTCTTGTGGGAATTGTTGGACCGATCCAAGCTCAATTGCAGATGAATTTCTATGCCAATTCTTGTCCTAATGCTGAAAAGATTGTTCAAGATTTTGTTTCAAACCACGTTTCTAATGCTCCTTCTCTTGCTGCTGCTCTCATTAGAATGCATTTCCATGACTGTTTTGTCCGAGGTTGTGATGGATCAGTGCTTATAAACTCAACGTCAGGAAACGCAGAGAGAGACGCGACTCCTAACCTAACGGTTCGAGGGTTTGGCTTCATCGACGCAATTAAATCTGTGCTTGAAGCTCAATGCCCTGGAATTGTCTCTTGCGCTGATATTATCGCTCTAGCTTCTCGCGACGCTGTCGTTTTCACCGGAGGACCGAATTGGAGTGTACCGACCGGAAGAAGAGACGGGAGGATATCAAACGCAGCGGAGGCATTAGCCAACATTCCTCCTCCAACCAGTAATATCACCAATCTTCAGACACTCTTTGCAAACCAAGGACTTGATCTTAAGGACCTCGTTTTACTATCCGGGGCTCACACTATTGGTGTATCTCACTGCTCGTCTTTCACAAACCGTCTCTACAATTTTACGGGTCGTGGAGGCCAAGATCCGGCTTTGGACAGCGAGTACGCAGCCAATCTCAAGTCTAGAAAATGTCCTAGCCTCAACGATAACAAGACCATCGTAGAGATGGATCCAGGGAGCCGCAAAACATTTGATCTAAGTTATTACCAGCTCGTACTCAAGCGTAGAGGTCTGTTTCAATCAGACTCTGCTCTCACCACTAACCCCACAACACTTTCAAACATAAACCGGATCTTGACGGGTTCGGTGGGGAGTTTCTTCTCTGAGTTTGCCAAGTCAATGGAGAAAATGGGTCGGATCAATGTCAAGACTGGTTCAGCTGGAGTGGTTAGGAGGCAATGTTCCGTTGCAAATAGTTAAGGGGTGGAAATGTAAAAGATTTGGGAGCTTGTGGGGGTAGTTGTGATAATAATTAATAAGGATGATTGTGAATTTATGATGTGGCCTTTTGGGATTTGTGTGTATGGATTTTGTTACAGACTTCGTCAATAAAGAAATAAAAAGATTTTACTGCTTTTTTTTTAACATATTTGGCTTGTCGTGTATGAATCATGACATTTTAGTTGGTTTGAG
CDS Sequence
- >AT1G05260.1
ATGAATTGCTTGATAGCTATAGCTCTTTCAGTCTCTTTCTTTCTTGTGGGAATTGTTGGACCGATCCAAGCTCAATTGCAGATGAATTTCTATGCCAATTCTTGTCCTAATGCTGAAAAGATTGTTCAAGATTTTGTTTCAAACCACGTTTCTAATGCTCCTTCTCTTGCTGCTGCTCTCATTAGAATGCATTTCCATGACTGTTTTGTCCGAGGTTGTGATGGATCAGTGCTTATAAACTCAACGTCAGGAAACGCAGAGAGAGACGCGACTCCTAACCTAACGGTTCGAGGGTTTGGCTTCATCGACGCAATTAAATCTGTGCTTGAAGCTCAATGCCCTGGAATTGTCTCTTGCGCTGATATTATCGCTCTAGCTTCTCGCGACGCTGTCGTTTTCACCGGAGGACCGAATTGGAGTGTACCGACCGGAAGAAGAGACGGGAGGATATCAAACGCAGCGGAGGCATTAGCCAACATTCCTCCTCCAACCAGTAATATCACCAATCTTCAGACACTCTTTGCAAACCAAGGACTTGATCTTAAGGACCTCGTTTTACTATCCGGGGCTCACACTATTGGTGTATCTCACTGCTCGTCTTTCACAAACCGTCTCTACAATTTTACGGGTCGTGGAGGCCAAGATCCGGCTTTGGACAGCGAGTACGCAGCCAATCTCAAGTCTAGAAAATGTCCTAGCCTCAACGATAACAAGACCATCGTAGAGATGGATCCAGGGAGCCGCAAAACATTTGATCTAAGTTATTACCAGCTCGTACTCAAGCGTAGAGGTCTGTTTCAATCAGACTCTGCTCTCACCACTAACCCCACAACACTTTCAAACATAAACCGGATCTTGACGGGTTCGGTGGGGAGTTTCTTCTCTGAGTTTGCCAAGTCAATGGAGAAAATGGGTCGGATCAATGTCAAGACTGGTTCAGCTGGAGTGGTTAGGAGGCAATGTTCCGTTGCAAATAGTTAA
Protein Sequence
- >AT1G05260.1
MNCLIAIALSVSFFLVGIVGPIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVANS