Information report for AT1G05010
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009620 — acts upstream of or within — response to fungus
- GO:0005737 — located in — cytoplasm
- GO:0009693 — involved in — ethylene biosynthetic process
- GO:0009693 — acts upstream of or within — ethylene biosynthetic process
- GO:0071398 — involved in — cellular response to fatty acid
- GO:0009815 — enables — 1-aminocyclopropane-1-carboxylate oxidase activity
- GO:0010494 — located in — cytoplasmic stress granule
- GO:0005829 — located in — cytosol
- GO:0005576 — located in — extracellular region
- GO:0016706 — enables — 2-oxoglutarate-dependent dioxygenase activity
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Functional anatomy of the Arabidopsis cytokinesis-specific syntaxin KNOLLE. DOI: 10.1111/j.1365-313X.2011.04736.x ; PMID: 21838778
- Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. DOI: 10.1242/jcs.074575 ; PMID: 21896643
- Expression of the bacterial heavy metal transporter MerC fused with a plant SNARE, SYP121, in Arabidopsis thaliana increases cadmium accumulation and tolerance. DOI: 10.1007/s00425-011-1543-4 ; PMID: 22089884
- Sec1/Munc18 protein stabilizes fusion-competent syntaxin for membrane fusion in Arabidopsis cytokinesis. DOI: 10.1016/j.devcel.2012.03.002 ; PMID: 22595672
- Interactomics of Qa-SNARE in Arabidopsis thaliana. DOI: 10.1093/pcp/pcu038 ; PMID: 24556609
- Plant cytokinesis: a tale of membrane traffic and fusion. DOI: 10.1042/BST20140246 ; PMID: 25619248
- A Genetic Screen for Mutations Affecting Cell Division in the Arabidopsis thaliana Embryo Identifies Seven Loci Required for Cytokinesis. DOI: 10.1371/journal.pone.0146492 ; PMID: 26745275
- Concerted Action of Evolutionarily Ancient and Novel SNARE Complexes in Flowering-Plant Cytokinesis. DOI: 10.1016/j.devcel.2017.12.027 ; PMID: 29396117
- A Functional Study of AUXILIN-LIKE1 and 2, Two Putative Clathrin Uncoating Factors in Arabidopsis. DOI: 10.1105/tpc.17.00785 ; PMID: 29511054
- Functional diversification of Arabidopsis SEC1-related SM proteins in cytokinetic and secretory membrane fusion. DOI: 10.1073/pnas.1722611115 ; PMID: 29844177
- The AP-1 Complex is Required for Proper Mucilage Formation in Arabidopsis Seeds. DOI: 10.1093/pcp/pcy158 ; PMID: 30099531
- A dual role for cell plate-associated PI4Kβ in endocytosis and phragmoplast dynamics during plant somatic cytokinesis. DOI: 10.15252/embj.2018100303 ; PMID: 30617084
- SNAREs Regulate Vesicle Trafficking During Root Growth and Development. DOI: 10.3389/fpls.2022.853251 ; PMID: 35360325
- Defects in division plane positioning in the root meristematic zone affect cell organization in the differentiation zone. DOI: 10.1242/jcs.260127 ; PMID: 36074053
- NSF/αSNAP2-mediated cis-SNARE complex disassembly precedes vesicle fusion in Arabidopsis cytokinesis. DOI: 10.1038/s41477-023-01427-8 ; PMID: 37264150
- Identification of cis-elements that regulate gene expression during initiation of axillary bud outgrowth in Arabidopsis. DOI: 10.1104/pp.104.057984 ; PMID: 15908603
- Redox state of plastoquinone pool regulates expression of Arabidopsis thaliana genes in response to elevated irradiance. DOI: 20081565 ; PMID: 18231654
- A small family of chloroplast atypical thioredoxins. DOI: 10.1104/pp.108.128314 ; PMID: 19109414
Gene Resources
- UniProt: A0A178WHU2
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WHU2
- EnsemblPlants: AT1G05010.1
- Gramene: AT1G05010.1
- KEGG: ath:AT1G05010
- Orthologous matrix: ISIELMM
- ExpressionAtlas: AT1G05010
- InterPro: IPR005123, IPR026992, IPR027443
- PANTHER: PTHR47991
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A178WHU2
- SWISS-MODEL: A0A178WHU2
Homologs
- Brassica napus BnaC07G0436000ZS, BnaA03G0460000ZS, BnaC03G0723400ZS
- Brassica oleracea Bo7g107340
- Brassica rapa Bra038780, Bra020890
- Cucumis melo MELO3C002483
Sequences
cDNA Sequence
- >AT1G05010.1
CTTTTGTTGATTATTAGTCCAAAACATTAAAAGAACAAAAACAAAAAAAAGTGTTCACGCTTTTTGGTCGACCGTAACATACTTTATTGAATTTTGTTAAAAAATCATTACACAAATGATATTATGGATGTGTGTGGTCCAAAAAACCAAATATTGACTGTAGAATGATAACTCGTAGAAGTAACTCAAAGCTCCTCTCTGCGCTTCTTTTCTCTCTATAAAACCAAGTCTTTGATCATCAGATTTATATCAAACTTCAAAAGCGTCAAACATAAAGTTAGGCCAAGAAACCCATTTAAAAAAAAAGAGAGAGAGATGGAGAGTTTCCCGATCATCAATCTCGAGAAGCTTAATGGAGAAGAGAGAGCAATCACTATGGAGAAGATCAAAGACGCTTGTGAAAACTGGGGCTTCTTTGAGTGTGTGAACCATGGGATTTCACTCGAGCTTTTGGACAAAGTGGAGAAGATGACCAAGGAACATTACAAGAAGTGCATGGAAGAGAGATTCAAGGAATCGATTAAGAACAGAGGTCTTGACTCTCTTCGCTCTGAAGTCAACGACGTTGACTGGGAATCCACTTTCTACCTCAAGCACCTTCCCGTCTCTAATATCTCCGATGTCCCTGATCTCGACGACGATTACAGAACGTTAATGAAAGACTTCGCCGGAAAGATAGAGAAGTTGTCGGAGGAGCTACTGGATCTGCTGTGCGAGAATCTCGGTTTAGAGAAGGGTTATTTAAAAAAGGTGTTTTACGGGTCGAAAAGACCGACTTTTGGAACCAAAGTCAGCAATTATCCACCTTGTCCTAATCCGGACCTAGTCAAGGGTCTCCGAGCCCACACCGACGCCGGCGGCATCATCCTCCTCTTCCAAGACGACAAAGTCAGTGGACTTCAGCTTCTTAAAGACGGCGAGTGGGTCGATGTTCCTCCGGTTAAGCATTCAATCGTCGTTAATCTCGGCGATCAACTTGAGGTGATAACCAATGGGAAGTACAAGAGTGTGGAACATAGAGTGCTATCTCAGACAGACGGAGAAGGAAGAATGTCGATCGCATCATTCTATAATCCGGGAAGCGACTCTGTTATTTTTCCGGCGCCGGAGCTGATCGGAAAAGAAGCAGAGAAGGAGAAGAAAGAGAACTATCCGAGATTTGTGTTTGAAGATTACATGAAACTCTACTCTGCTGTCAAGTTTCAGGCCAAGGAACCAAGGTTTGAAGCCATGAAAGCTATGGAGACAACTGTGGCCAACAATGTTGGACCATTGGCCACTGCGTGAATGATATGTAACTGGTTAATAAATATATATATATATATATATATAGTCTTTATATAATGTCTTAGAAACTTGATTATTCACTATACGAATAATTTTGTTCATGTTGTTGTATGTTTAAGTGGTGAATGTGTTTTATATATGGGAATTAATGTTTTCTGTTCGTAGAGTTCAATACGAATAAACTGCAGACAAATAAGGCAATCAAATATAATAAAAAAACAAGTAAGGCAATCAAATACAAG
CDS Sequence
- >AT1G05010.1
ATGGAGAGTTTCCCGATCATCAATCTCGAGAAGCTTAATGGAGAAGAGAGAGCAATCACTATGGAGAAGATCAAAGACGCTTGTGAAAACTGGGGCTTCTTTGAGTGTGTGAACCATGGGATTTCACTCGAGCTTTTGGACAAAGTGGAGAAGATGACCAAGGAACATTACAAGAAGTGCATGGAAGAGAGATTCAAGGAATCGATTAAGAACAGAGGTCTTGACTCTCTTCGCTCTGAAGTCAACGACGTTGACTGGGAATCCACTTTCTACCTCAAGCACCTTCCCGTCTCTAATATCTCCGATGTCCCTGATCTCGACGACGATTACAGAACGTTAATGAAAGACTTCGCCGGAAAGATAGAGAAGTTGTCGGAGGAGCTACTGGATCTGCTGTGCGAGAATCTCGGTTTAGAGAAGGGTTATTTAAAAAAGGTGTTTTACGGGTCGAAAAGACCGACTTTTGGAACCAAAGTCAGCAATTATCCACCTTGTCCTAATCCGGACCTAGTCAAGGGTCTCCGAGCCCACACCGACGCCGGCGGCATCATCCTCCTCTTCCAAGACGACAAAGTCAGTGGACTTCAGCTTCTTAAAGACGGCGAGTGGGTCGATGTTCCTCCGGTTAAGCATTCAATCGTCGTTAATCTCGGCGATCAACTTGAGGTGATAACCAATGGGAAGTACAAGAGTGTGGAACATAGAGTGCTATCTCAGACAGACGGAGAAGGAAGAATGTCGATCGCATCATTCTATAATCCGGGAAGCGACTCTGTTATTTTTCCGGCGCCGGAGCTGATCGGAAAAGAAGCAGAGAAGGAGAAGAAAGAGAACTATCCGAGATTTGTGTTTGAAGATTACATGAAACTCTACTCTGCTGTCAAGTTTCAGGCCAAGGAACCAAGGTTTGAAGCCATGAAAGCTATGGAGACAACTGTGGCCAACAATGTTGGACCATTGGCCACTGCGTGA
Protein Sequence
- >AT1G05010.1
MESFPIINLEKLNGEERAITMEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAKEPRFEAMKAMETTVANNVGPLATA