Gene Details:

• Gene ID: AT1G04880
• Gene Symbol: AtHMGB15, HMGBD15
• Gene Name: ARID-HMG DNA-binding protein 15, ARID-HMG DNA-binding protein 15
• Description: HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11)
• TAIR Accession: locus:2010587
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G04880.1

Plant Ontology Annotations:

• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
• PO:0020003  — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)

Gene Ontology:

• GO:0009860  — acts upstream of or within — pollen tube growth
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0009846  — acts upstream of or within — pollen germination
• GO:0000400  — enables — four-way junction DNA binding
• GO:0019760  — acts upstream of or within — glucosinolate metabolic process
• GO:0090406  — located in — pollen tube
• GO:0008134  — enables — transcription factor binding
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0005634  — located in — nucleus

Germplasm Phenotype:

• athmgb15-1  — Reduced fertility, shorter siliques, lower seed set.

Function-related keywords:

• seed ,  petal ,  pollen ,  plant sperm cell ,  pollen tube cell ,  plant ovule

Literature:

• In silico identification and comparative genomics of candidate genes involved in biosynthesis and accumulation of seed oil in plants.   DOI:  10.1155/2012/914843 ;  PMID:  22312320
• Modification of Seed Oil Composition in Arabidopsis by Artificial microRNA-Mediated Gene Silencing.   DOI:  10.3389/fpls.2012.00168 ;  PMID:  22866055
• Genome-Wide Association Study in Arabidopsis thaliana of Natural Variation in Seed Oil Melting Point: A Widespread Adaptive Trait in Plants.   DOI:  10.1093/jhered/esw008 ;  PMID:  26865732
• Accumulation of palmitate in Arabidopsis mediated by the acyl-acyl carrier protein thioesterase FATB1.   DOI:  10.1104/pp.123.2.637 ;  PMID:  10859193
• Deposition and localization of lipid polyester in developing seeds of Brassica napus and Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2007.03348.x ;  PMID:  18179651
• Quality control for plant metabolomics: reporting MSI-compliant studies.   DOI:  10.1111/j.1365-313X.2007.03387.x ;  PMID:  18269577
• Clonal analysis of the late flowering fca mutant of Arabidopsis thaliana: cell fate and cell autonomy.   DOI:  10.1242/dev.122.3.1041 ;  PMID:  8631249
• Mg-chelatase of tobacco: identification of a Chl D cDNA sequence encoding a third subunit, analysis of the interaction of the three subunits with the yeast two-hybrid system, and reconstitution of the enzyme activity by co-expression of recombinant CHL D, CHL H and CHL I.   DOI:  10.1046/j.1365-313x.1997.12050981.x ;  PMID:  9418040
• A DNA-damage-induced cell cycle checkpoint in Arabidopsis.   DOI:  10.1093/genetics/164.1.323 ;  PMID:  12750343
• Gene expression profiling of the tetrapyrrole metabolic pathway in Arabidopsis with a mini-array system.   DOI:  10.1104/pp.104.042408 ;  PMID:  15326282
• An Arabidopsis mutant that is resistant to the protoporphyrinogen oxidase inhibitor acifluorfen shows regulatory changes in tetrapyrrole biosynthesis.   DOI:  10.1007/s00438-005-1129-6 ;  PMID:  15815918
• Light signalling pathways regulating the Mg-chelatase branchpoint of chlorophyll synthesis during de-etiolation in Arabidopsis thaliana.   DOI:  10.1039/b802596g ;  PMID:  18846290

Sequences: