Information report for AT1G04690
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0019538 — acts upstream of or within — protein metabolic process
- GO:0005737 — located in — cytoplasm
- GO:0005576 — located in — extracellular region
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0005886 — located in — plasma membrane
- GO:0009506 — located in — plasmodesma
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0048589 — acts upstream of or within — developmental growth
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- GLYI and D-LDH play key role in methylglyoxal detoxification and abiotic stress tolerance. DOI: 10.1038/s41598-018-23806-4 ; PMID: 29615695
- The metabolite methylglyoxal-mediated gene expression is associated with histone methylglyoxalation. DOI: 10.1093/nar/gkab014 ; PMID: 33476385
- An evolutionarily conserved translation initiation mechanism regulates nuclear or mitochondrial targeting of DNA ligase 1 in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02791.x ; PMID: 16790030
- DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks. DOI: 10.1186/1471-2229-9-79 ; PMID: 19558640
- DNA LIGASE I exerts a maternal effect on seed development in Arabidopsis thaliana. DOI: 10.1242/dev.041020 ; PMID: 20023162
- Arabidopsis ARP endonuclease functions in a branched base excision DNA repair pathway completed by LIG1. DOI: 10.1111/j.1365-313X.2011.04720.x ; PMID: 21781197
- A DNA ligase required for active DNA demethylation and genomic imprinting in Arabidopsis. DOI: 10.1038/cr.2015.45 ; PMID: 25906993
- Expression and function of AtMBD4L, the single gene encoding the nuclear DNA glycosylase MBD4L in Arabidopsis. DOI: 10.1016/j.plantsci.2015.03.011 ; PMID: 25900572
- The Arabidopsis DREAM complex antagonizes WDR5A to modulate histone H3K4me2/3 deposition for a subset of genome repression. DOI: 10.1073/pnas.2206075119 ; PMID: 35759663
- Role of Arabidopsis NHL family in ABA and stress response. DOI: 10.1080/15592324.2016.1180493 ; PMID: 27110948
- SIAMESE, a plant-specific cell cycle regulator, controls endoreplication onset in Arabidopsis thaliana. DOI: 10.1105/tpc.106.044834 ; PMID: 17098811
- Functional Conservation in the SIAMESE-RELATED Family of Cyclin-Dependent Kinase Inhibitors in Land Plants. DOI: 10.1105/tpc.15.00489 ; PMID: 26546445
- A hierarchical transcriptional network activates specific CDK inhibitors that regulate G2 to control cell size and number in Arabidopsis. DOI: 10.1038/s41467-022-29316-2 ; PMID: 35351906
- Members of SIAMESE-RELATED Class Inhibitor Proteins of Cyclin-Dependent Kinase Retard G2 Progression and Increase Cell Size in Arabidopsis thaliana. DOI: 10.3390/life12091356 ; PMID: 36143392
Gene Resources
- UniProt: A0A178WF48
- EMBL: CACRSJ010000104, CACSHJ010000087, LUHQ01000001
- AlphaFoldDB: A0A178WF48
- EnsemblPlants: AT1G04690.1
- Gramene: AT1G04690.1
- KEGG: ath:AT1G04690
- Orthologous matrix: MWAGPYG
- ExpressionAtlas: AT1G04690
- InterPro: IPR005399, IPR023210, IPR036812
- PANTHER: PTHR43150, PTHR43150:SF2
- SUPFAM: SSF51430
- Gene3D: 3.20.20.100
- OrthoDB: A0A178WF48
- SWISS-MODEL: A0A178WF48
- Conserved Domain Database: cd19143
Homologs
- Fragaria vesca mrna28785.1-v1.0-hybrid
- Malus domestica MDP0000254650
- Oryza sativa KOB1
Sequences
cDNA Sequence
- >AT1G04690.1
CAAAATTTTGGTACATATTGGTTGATCATGAAAACCGGAAAAGTAAAACCAAACCGGTAGCTTACCGTATTTTGCTAAGTGTTGTCACTTATTAAGATTGGTAATAGAGTACTTATTGTCTGTTCTTCTTCATTCATTACAACAAACTCTTTGAGACCTAAAGAGAGAGAGAGCGATAGTGAGATTTAGATCAACAGATTTGAATCGATTTCTGAAAACATGCAGTACAAGAATCTGGGGAAATCGGGTTTAAAAGTGAGCACGCTCTCGTTCGGAGCGTGGGTTACGTTCGGGAACCAGCTCGATGTGAAAGAAGCGAAATCGATTCTTCAGTGTTGTCGTGATCATGGAGTCAATTTCTTCGATAACGCTGAGGTTTACGCTAATGGTCGCGCTGAGGAGATTATGGGTCAAGCGATTCGTGAACTGGGTTGGCGTCGATCCGATATCGTCATCTCTACCAAGATCTTCTGGGGTGGTCCTGGTCCTAACGATAAGGGTTTATCTAGGAAACATATCGTTGAAGGCACTAAAGCTTCTCTCAAACGACTTGATATGGATTACGTTGATGTGCTCTATTGCCACAGGCCGGATGCTTCAACTCCTATCGAAGAGACTGTGAGGGCGATGAACTACGTGATTGATAAGGGTTGGGCCTTCTATTGGGGAACCAGTGAATGGTCAGCTCAACAAATTACGGAGGCATGGGGAGCTGCTGACCGGTTGGATTTGGTTGGTCCAATTGTCGAACAGCCAGAATACAACATGTTCGCTAGGCACAAAGTTGAGACAGAGTTTCTTCCTCTGTACACCAACCATGGTATAGGTCTCACTACCTGGAGCCCACTTGCATCTGGTGTGCTCACTGGTAAATACAACAAGGGAGCTATTCCCTCAGACAGCCGATTTGCATTGGAGAACTACAAAAACCTTGCCAATAGATCACTTGTGGATGACGTGCTGAGGAAAGTTAGCGGTCTCAAACCCATTGCAGATGAGCTAGGTGTAACCTTGGCTCAGCTTGCAATCGCATGGTGTGCTTCAAATCCTAATGTGTCATCTGTTATCACTGGTGCCACAAGGGAGTCACAGATTCAAGAAAATATGAAAGCTGTTGATGTGATCCCATTGTTGACCCCTATTGTTCTGGACAAGATTGAGCAAGTGATACAGAGCAAACCAAAACGTCCTGAATCATATAGGTAAAACCAACATCCAAGATCTCTCTTCCCTATTCAATCGTTTACAAAAGAGTGTTGCAGGAAAAAGAAAACATTAGAAGAAGCTCTGTGATGTATGTTGTTGGATGTTGTCTCGTTTTCGCTTTGTTTGTTCTCTTTAGCAGCTTATGCATTTTTAAGACTCAGACAGAGAGAAAGAGAGACTAATGTTTTTTTTTAGTTTTTCTTGTTTCATCATTTAAAAAACGGTCTTATTTGTTACTTGTTAGTGCAACTTAAAGTTTGGTTCTTGTAGTTTGCCATGTCATGACGTCAATATATTGAATAGCTCATCAAACAATTCTGGTTATATCTTAATGTTGTGAAGATTTTAATTTAGTGCAAGGGGGTTGATATGTTATTAATAAAGATTTAATGGAGGTATTTAA
CDS Sequence
- >AT1G04690.1
ATGCAGTACAAGAATCTGGGGAAATCGGGTTTAAAAGTGAGCACGCTCTCGTTCGGAGCGTGGGTTACGTTCGGGAACCAGCTCGATGTGAAAGAAGCGAAATCGATTCTTCAGTGTTGTCGTGATCATGGAGTCAATTTCTTCGATAACGCTGAGGTTTACGCTAATGGTCGCGCTGAGGAGATTATGGGTCAAGCGATTCGTGAACTGGGTTGGCGTCGATCCGATATCGTCATCTCTACCAAGATCTTCTGGGGTGGTCCTGGTCCTAACGATAAGGGTTTATCTAGGAAACATATCGTTGAAGGCACTAAAGCTTCTCTCAAACGACTTGATATGGATTACGTTGATGTGCTCTATTGCCACAGGCCGGATGCTTCAACTCCTATCGAAGAGACTGTGAGGGCGATGAACTACGTGATTGATAAGGGTTGGGCCTTCTATTGGGGAACCAGTGAATGGTCAGCTCAACAAATTACGGAGGCATGGGGAGCTGCTGACCGGTTGGATTTGGTTGGTCCAATTGTCGAACAGCCAGAATACAACATGTTCGCTAGGCACAAAGTTGAGACAGAGTTTCTTCCTCTGTACACCAACCATGGTATAGGTCTCACTACCTGGAGCCCACTTGCATCTGGTGTGCTCACTGGTAAATACAACAAGGGAGCTATTCCCTCAGACAGCCGATTTGCATTGGAGAACTACAAAAACCTTGCCAATAGATCACTTGTGGATGACGTGCTGAGGAAAGTTAGCGGTCTCAAACCCATTGCAGATGAGCTAGGTGTAACCTTGGCTCAGCTTGCAATCGCATGGTGTGCTTCAAATCCTAATGTGTCATCTGTTATCACTGGTGCCACAAGGGAGTCACAGATTCAAGAAAATATGAAAGCTGTTGATGTGATCCCATTGTTGACCCCTATTGTTCTGGACAAGATTGAGCAAGTGATACAGAGCAAACCAAAACGTCCTGAATCATATAGGTAA
Protein Sequence
- >AT1G04690.1
MQYKNLGKSGLKVSTLSFGAWVTFGNQLDVKEAKSILQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWRRSDIVISTKIFWGGPGPNDKGLSRKHIVEGTKASLKRLDMDYVDVLYCHRPDASTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGAADRLDLVGPIVEQPEYNMFARHKVETEFLPLYTNHGIGLTTWSPLASGVLTGKYNKGAIPSDSRFALENYKNLANRSLVDDVLRKVSGLKPIADELGVTLAQLAIAWCASNPNVSSVITGATRESQIQENMKAVDVIPLLTPIVLDKIEQVIQSKPKRPESYR