Information report for AT1G04640
Gene Details
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Functional Descriptions
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009249 — involved in — protein lipoylation
- GO:0009106 — acts upstream of or within — lipoate metabolic process
- GO:0005739 — located in — mitochondrion
- GO:0033819 — enables — lipoyl(octanoyl) transferase activity
- GO:0005576 — located in — extracellular region
- GO:0017118 — enables — lipoyltransferase activity
- GO:0005739 — is active in — mitochondrion
- GO:0005737 — located in — cytoplasm
Functional Keywords
- vascular leaf , cauline leaf , inflorescence meristem , seed , carpel , petal , stem , guard cell
Literature and News
- A NIGT1-centred transcriptional cascade regulates nitrate signalling and incorporates phosphorus starvation signals in Arabidopsis. DOI: 10.1038/s41467-018-03832-6 ; PMID: 29636481
- Polycomb Repressive Complex 2 attenuates the very high expression of the Arabidopsis gene NRT2.1. DOI: 10.1038/s41598-018-26349-w ; PMID: 29784958
- Copper excess reduces nitrate uptake by Arabidopsis roots with specific effects on gene expression. DOI: 10.1016/j.jplph.2018.06.005 ; PMID: 29933138
- Genome-Wide Analysis of Long Intergenic Noncoding RNAs Responding to Low-Nutrient Conditions in Arabidopsis thaliana: Possible Involvement of Trans-Acting siRNA3 in Response to Low Nitrogen. DOI: 10.1093/pcp/pcz048 ; PMID: 30892644
Gene Resources
- UniProt: A0A178WI01
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WI01
- EnsemblPlants: AT1G04640.1, AT1G04640.2
- Gramene: AT1G04640.1, AT1G04640.2
- KEGG: ath:AT1G04640
- Orthologous matrix: GEVTYHC
- ExpressionAtlas: AT1G04640
- InterPro: IPR000544, IPR004143, IPR020605
- PANTHER: PTHR10993, PTHR10993:SF15
- SUPFAM: SSF55681
- PROSITE: PS01313, PS51733
- Gene3D: 3.30.930.10
- OrthoDB: A0A178WI01
- SWISS-MODEL: A0A178WI01
- Conserved Domain Database: cd16444
Homologs
- Brassica napus GSBRNA2T00039973001, GSBRNA2T00130406001
- Daucus carota DCAR_002030
- Raphanus raphanistrum RrC1538_p3
Sequences
cDNA Sequence
- >AT1G04640.2
TATCTCTGAGGTCCAAACTCTTCGGTGGAGGAGAAGAACTGAAACGGTAATCTAGCTCTTCAAAGCCTCTTACTTTACCGATTACTTGCTCTTGTACCATGTATACGATCATTTATATGGGTTTTTATCGGTTACGGTAATCCTCCGTGTCTTTTTCTTTGTGTATGCATGTTAAGTGTTCGATAAAATACCTCAAAGACCTGGTACCAAAAACTATTCATAGGGTTTGTATCCTAGCTCCTCAGATTTTTATTCCTAATTTTAGGTTTGCTGCCTTTGGAAATTTTTTGTTGTGTTAGTCATGCTTTTAGACCCCCATCAGTAGTATTAAGTTTGTGTGGAAAAAAAGGTCGTGTTTGGAATCTTCCTATATAACCTAAGTAGTTAGAGATAAAGTGATCAATTATGGAGTCTGTGTTAATGTGCAGGAAATGAGATCCCCTAGAACCTTGGAGGTTTGGAAGCTAGGCACTGTCAACTATTTGAAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGAAAAGCTCATCAGATTCCAGATACCCTCCTCTCGCTTCAGCATCCACCAACTTATACGCTCGGAAAGCGTAGAACCGATCACAATCTACTTATCCCTGAATCTGAACTTACAAAAATCGGAGCTGAACTTCATTATACTCAAAGAGGAGGAGACATCACCTTCCATGGCCCTCATCAAGCCATCTTATATCCCATCATTTCCTTACGCAGCATTGGTTTTGGTGCTAGGAACTACGTGGAGACATTGGAGCGGTCAATGATCGAGTTTGCTTCGATTTATGGCGTGAAAGCTCGAGCAGGAAACAAATGTGAGACTGGGGTTTGGGTTGGGGATAGGAAGATCGGTGCTATTGGGGTTAGGATATCTTCTGGAATCACTAGTCATGGTTTGGCCTTAAATATAGATCCTGATATGAAGTACTTTGAGCACATTGTGCCTTGTGGGATTGCTGATAAAGAAGTTACATCTTTGCGAAGAGAGACGGATACTCTGCTTCCTTCAGAAGAAGTGATTCATGAACAGTTGGTTTCTTGTTTAGCCAAAGCGTTTTCTTATGATGATGTTGTCTGGAAGGAAGATCCTTCACTCATTTTGGACACCCAAGATAAAGAATAA - >AT1G04640.1
TATCTCTGAGGTCCAAACTCTTCGGTGGAGGAGAAGAACTGAAACGGTAATCTAGCTCTTCAAAGCCTCTTACTTTACCGATTACTTGCTCTTGTACCATGTATACGATCATTTATATGGGTTTTTATCGGTTACGGTAATCCTCCGTGTCTTTTTCTTTGTGTATGCATGTTAAGTGTTCGATAAAATACCTCAAAGACCTGGTACCAAAAACTATTCATAGGGTTTGTATCCTAGCTCCTCAGATTTTTATTCCTAATTTTAGGTTTGCTGCCTTTGGAAATTTTTTGTTGTGTTAGTCATGCTTTTAGACCCCCATCAGTAGTATTAAGTTTGTGTGGAAAAAAAGGTCGTGTTTGGAATCTTCCTATATAACCTAAGTAGTTAGAGATAAAGTGATCAATTATGGAGTCTGTGTTAATGTGCAGGAAATGAGATCCCCTAGAACCTTGGAGGTTTGGAAGCTAGGCACTGTCAACTATTTGAAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGAAAAGCTCATCAGATTCCAGATACCCTCCTCTCGCTTCAGCATCCACCAACTTATACGCTCGGAAAGCGTAGAACCGATCACAATCTACTTATCCCTGAATCTGAACTTACAAAAATCGGAGCTGAACTTCATTATACTCAAAGAGGAGGAGACATCACCTTCCATGGCCCTCATCAAGCCATCTTATATCCCATCATTTCCTTACGCAGCATTGGTTTTGGTGCTAGGAACTACGTGGAGACATTGGAGCGGTCAATGATCGAGTTTGCTTCGATTTATGGCGTGAAAGCTCGAGCAGGAAACAAATGTGAGACTGGGGTTTGGGTTGGGGATAGGAAGATCGGTGCTATTGGGGTTAGGATATCTTCTGGAATCACTAGTCATGGTTTGGCCTTAAATATAGATCCTGATATGAAGTACTTTGAGCACATTGTGCCTTGTGGGATTGCTGATAAAGAAGTTACATCTTTGCGAAGAGAGACGGATACTCTGCTTCCTTCAGAAGAAGTGATTCATGAACAGTTGGTTTCTTGTTTAGCCAAAGCGTTTTCTTATGATGATGTTGTCTGGAAGGAAGATCCTTCACTCATTTTGGACACCCAAGATAAAGAATAA
CDS Sequence
- >AT1G04640.2
ATGAGATCCCCTAGAACCTTGGAGGTTTGGAAGCTAGGCACTGTCAACTATTTGAAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGAAAAGCTCATCAGATTCCAGATACCCTCCTCTCGCTTCAGCATCCACCAACTTATACGCTCGGAAAGCGTAGAACCGATCACAATCTACTTATCCCTGAATCTGAACTTACAAAAATCGGAGCTGAACTTCATTATACTCAAAGAGGAGGAGACATCACCTTCCATGGCCCTCATCAAGCCATCTTATATCCCATCATTTCCTTACGCAGCATTGGTTTTGGTGCTAGGAACTACGTGGAGACATTGGAGCGGTCAATGATCGAGTTTGCTTCGATTTATGGCGTGAAAGCTCGAGCAGGAAACAAATGTGAGACTGGGGTTTGGGTTGGGGATAGGAAGATCGGTGCTATTGGGGTTAGGATATCTTCTGGAATCACTAGTCATGGTTTGGCCTTAAATATAGATCCTGATATGAAGTACTTTGAGCACATTGTGCCTTGTGGGATTGCTGATAAAGAAGTTACATCTTTGCGAAGAGAGACGGATACTCTGCTTCCTTCAGAAGAAGTGATTCATGAACAGTTGGTTTCTTGTTTAGCCAAAGCGTTTTCTTATGATGATGTTGTCTGGAAGGAAGATCCTTCACTCATTTTGGACACCCAAGATAAAGAATAA - >AT1G04640.1
ATGAGATCCCCTAGAACCTTGGAGGTTTGGAAGCTAGGCACTGTCAACTATTTGAAATCCCTTAAACTGCAGGAGAAATTAGTTTCAGAGAGAAAAGCTCATCAGATTCCAGATACCCTCCTCTCGCTTCAGCATCCACCAACTTATACGCTCGGAAAGCGTAGAACCGATCACAATCTACTTATCCCTGAATCTGAACTTACAAAAATCGGAGCTGAACTTCATTATACTCAAAGAGGAGGAGACATCACCTTCCATGGCCCTCATCAAGCCATCTTATATCCCATCATTTCCTTACGCAGCATTGGTTTTGGTGCTAGGAACTACGTGGAGACATTGGAGCGGTCAATGATCGAGTTTGCTTCGATTTATGGCGTGAAAGCTCGAGCAGGAAACAAATGTGAGACTGGGGTTTGGGTTGGGGATAGGAAGATCGGTGCTATTGGGGTTAGGATATCTTCTGGAATCACTAGTCATGGTTTGGCCTTAAATATAGATCCTGATATGAAGTACTTTGAGCACATTGTGCCTTGTGGGATTGCTGATAAAGAAGTTACATCTTTGCGAAGAGAGACGGATACTCTGCTTCCTTCAGAAGAAGTGATTCATGAACAGTTGGTTTCTTGTTTAGCCAAAGCGTTTTCTTATGATGATGTTGTCTGGAAGGAAGATCCTTCACTCATTTTGGACACCCAAGATAAAGAATAA
Protein Sequence
- >AT1G04640.2
MRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIEFASIYGVKARAGNKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCGIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSLILDTQDKE - >AT1G04640.1
MRSPRTLEVWKLGTVNYLKSLKLQEKLVSERKAHQIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTKIGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIEFASIYGVKARAGNKCETGVWVGDRKIGAIGVRISSGITSHGLALNIDPDMKYFEHIVPCGIADKEVTSLRRETDTLLPSEEVIHEQLVSCLAKAFSYDDVVWKEDPSLILDTQDKE