Gene Details:
- Gene ID: AT1G04635
- Gene Symbol: AtPOP5, EMB1687, POP5
- Gene Name: EMBRYO DEFECTIVE 1687, A. thaliana homolog of yeast POP5
- Description: ribonuclease P family protein / Rpp14 family protein;(source:Araport11)
- TAIR Accession: locus:504956160
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0006364 — involved in — rRNA processing
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0000172 — part of — ribonuclease MRP complex
- GO:0005655 — part of — nucleolar ribonuclease P complex
- GO:0005634 — located in — nucleus
- GO:0033204 — enables — ribonuclease P RNA binding
Literature:
- Shoot-to-Root Mobile Transcription Factor HY5 Coordinates Plant Carbon and Nitrogen Acquisition. DOI: 10.1016/j.cub.2015.12.066 ; PMID: 26877080
- Members of BTB Gene Family of Scaffold Proteins Suppress Nitrate Uptake and Nitrogen Use Efficiency. DOI: 10.1104/pp.15.01731 ; PMID: 27208309
- Multiple mechanisms of nitrate sensing by Arabidopsis nitrate transceptor NRT1.1. DOI: 10.1038/nplants.2015.15 ; PMID: 27246882
- Identification and molecular characterization of the Brachypodium distachyon NRT2 family, with a major role of BdNRT2.1. DOI: 10.1111/ppl.12716 ; PMID: 29498420
- Evaluation of the plant growth-promoting activity of Pseudomonas nitroreducens in Arabidopsis thaliana and Lactuca sativa. DOI: 10.1007/s00299-018-2275-8 ; PMID: 29541882
Sequences:
cDNA Sequence
- >AT1G04635.1
ATCTTTAGCCGCCGACTTGGTATCATCAAATCGAGGAGATTCGAAGAAGCATGGTGGGATTTAAGAACAGATACATGTTAATGGAAGTTTTTCTGGATCCGGACAAGGATCTTCTCGGAGAAGGAACACCGATCATTCTTACACAATTCAATCTCTCGAAAGCAATCAAAGACAGTATCCTCGTCAATTTCGGCGAGTGTGGTCTAGGTTCGTCTCTCGGTTCCTTCCAAGTGAAATATGTGAATCCAATCACGAAGCTATGCATTGTAAGATCATCAAGAGAAGAACACAGACAAGTTTGGTTAGCAATCACATTGGTCAAAAGCATCGGAAACTGTCCGGTGATCTTAAACTTGCTCGATATTAGCGGTTGCATCAGAGCGTGTAGAGACACAGCCTTGAAGTGCGACAAGGAGAAGTTTGAGCAGTGTAGCAAAAGCTTGTCTGAAGAGGAGATTAGGCAGATGAATACTTCTCTTGAGAAGATCAAACTATTGGAAAACTGAAACTTTTCTAGACCTTTTTTCCTTCGAATTTGACCCCTAAGTTTTGAAATTGTACAATCTTTGTATTTTTCTTAATTCTGAAATACAAAGGGATAAGAAACAGCATCATTCCCTGAAAAGATTGTTTGCGATTTGAATCACTGGGTTTTTATATGTTGGAATTAAAATAAGAGGGTGTGAATTGTTGAGATATGTTCTAGATAAGGCGTAATTCTGTGA
CDS Sequence
- >AT1G04635.1
ATGGTGGGATTTAAGAACAGATACATGTTAATGGAAGTTTTTCTGGATCCGGACAAGGATCTTCTCGGAGAAGGAACACCGATCATTCTTACACAATTCAATCTCTCGAAAGCAATCAAAGACAGTATCCTCGTCAATTTCGGCGAGTGTGGTCTAGGTTCGTCTCTCGGTTCCTTCCAAGTGAAATATGTGAATCCAATCACGAAGCTATGCATTGTAAGATCATCAAGAGAAGAACACAGACAAGTTTGGTTAGCAATCACATTGGTCAAAAGCATCGGAAACTGTCCGGTGATCTTAAACTTGCTCGATATTAGCGGTTGCATCAGAGCGTGTAGAGACACAGCCTTGAAGTGCGACAAGGAGAAGTTTGAGCAGTGTAGCAAAAGCTTGTCTGAAGAGGAGATTAGGCAGATGAATACTTCTCTTGAGAAGATCAAACTATTGGAAAACTGA
Protein Sequence
- >AT1G04635.1
MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQVKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCDKEKFEQCSKSLSEEEIRQMNTSLEKIKLLEN