Gene Details:
- Gene ID: AT1G04620
- Gene Symbol: HCAR
- Gene Name: 7-hydroxymethyl chlorophyll a (HMChl) reductase
- Description: coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature:
- The Arabidopsis nitrate transporter NRT2.4 plays a double role in roots and shoots of nitrogen-starved plants. DOI: 10.1105/tpc.111.092221 ; PMID: 22227893
- Nitrate transport capacity of the Arabidopsis thaliana NRT2 family members and their interactions with AtNAR2.1. DOI: 10.1111/j.1469-8137.2012.04094.x ; PMID: 22432443
- A deletion in the nitrate high affinity transporter NRT2.1 alters metabolomic and transcriptomic responses to Pseudomonas syringae. DOI: 10.4161/psb.20430 ; PMID: 22580578
- Characterization of the Nrt2.6 gene in Arabidopsis thaliana: a link with plant response to biotic and abiotic stress. DOI: 10.1371/journal.pone.0042491 ; PMID: 22880003
- Allelic differences in Medicago truncatula NIP/LATD mutants correlate with their encoded proteins' transport activities in planta. DOI: 10.4161/psb.22813 ; PMID: 23154505
- The nitrate transporter NRT2.1 functions in the ethylene response to nitrate deficiency in Arabidopsis. DOI: 10.1111/pce.12062 ; PMID: 23305042
- Whole-plant and organ-level nitrogen isotope discrimination indicates modification of partitioning of assimilation, fluxes and allocation of nitrogen in knockout lines of Arabidopsis thaliana. DOI: 10.1111/ppl.12038 ; PMID: 23414092
Sequences:
cDNA Sequence
- >AT1G04620.1
TAAGAATTGGTTATCAAGTTTGGTTCCTAAAAGATATCCAAGTTCAAAAGCAAAAAAATATCTTCTTTTCTCTCTCTCTACTCTCTTCTCTTCTTCTCTTCTTCTCTTCTTCTCTGGCTGGGCAACCATGATTACTGTCGTCACCTCCAGGCTCTCTCTCCTTCCTCCAGTCTTCTCCGTCGTTAACTCTTCTTCTTCGCGTTCCAAAGATATGAATCTAGAGCCAAAAAAGAAGGTTAAATTAAGAGAAGACTGGAGAGAAAAGTCCAGACCTATCCCACCCGGAGGAACCTATCCAGCTAAAGACCATTGCAGTCAGTGCGGGCTATGCGACACCTACTACATTGCCCATGTGAAGGAGGCATGTGCATTTCTTGGAGATGGAATGTCAAGGATTGAGAGCTTGGAACCTGTTGTGCATGGTAGAGGAAGGAAAGCAGATTCCTTACAAGATACATATTTTGGGGTGCATCAAGAGCAGCTCTATGCTCGTAAGTTGAAGCCTGTCGAAGGAGCTCAGTGGACTGGAATTGTCACAACCATAGCCATTGAGATGCTGAAATCTAATATGGTTGAAGCTGTCGTTTGTGTGCAGAGTGATCCTGAAGACAGATTATCTCCAAGACCAGTATTAGCCAGGACACCTGAAGAAGTTTTGGCTGCAAGAGGTGTCAAGCCAACTCTGTCTCCTAATCTGAATACTCTTGAATTAATCGAGGCTTCCGGAGTGAAGCGTCTTCTGTTTTGCGGTGTGGGTTGCCAAGTGCAAGCATTGAGATCAGTGGAGCAGCATCTGAATCTGGAAAAGTTGTATGTACTAGGCACCAATTGTGTGGACAACGGAACACGAGATGGACTAGACAAGTTTCTGAAAGCAGCTAGTAAAGAGCCAGAGACTGTTCTCCATTATGAATTTATGCAAGATTACAAGGTCCAACTCAAACACTTGGATGGACACATTGAAGAGGTTCCCTATTTCTCTCTACCTGCAAACGATTTAGTAGATGTCATAGCTCCATCGTGTTACAGCTGCTTTGATTACACAAATGCATTAGCGGATTTGGTTATCGGTTACATGGGTGTTCCGAAGTATTCAGGTCTGAACATGACTGACCATCCACAGTATATTACAGTGAGAAATGAACGTGGGAAAGAAATGCTCAGCTTGGTAGAAAACCTTTTGGAGATCACTCCAACAATCAGCAGCGGTGATCGGCGACCTTTTGTGACAGAAACTGTTAAGGCAGACGATGCTGCTAAGTTTGGTCAAGGTCCTGCTCAGCCAGCGCCACTATTTGTTGGAAACATTATTGCGTTCATCCTAAATTTGGTTGGTCCTAAGGGTCTAGAATTTGCTCGGTACTCGTTGGACTACCATACCATCAGAAACTATTTGTACGTAAACCGCAAATGGGGAAAGCAAAGAGCAAACACCCACATGCCATCATATGCCAAAAAGATAGTGGAAATGTACAACAAAAACGGCCAAATAGATAAAATGCTCTCCAAGAAATGAACATTTTAGGCCTTTCTCATGTAAGTTTCCAAATGTATATTTCATCCTACAAGTGAGTAAATGTACATTGGTCCTACTGTTTCTCAACTTGTAGTATGTTAGTAATATCCAAAACTATTTCCCTCGTGAATTTGGTAAGACACCGGCAAGAAAAGATGGGTCGGTTTGGTGTTTTTTGGCAGAGAACAGAGAATAAGAAACAGTCTAAATCAGCGGCTGAATCCAAATCAACCCATGTGGGTTCCTTCCTCCATATCTTTAGGTTAAGGTGATGTCCGAGTAAAAGGTTGCAGGGTTTTGCATGAGAACATGAATAACTGTTTTAAGAGGATGGGAACCAGACATTTACACAGTTGGGGGGAATTAGCTTTTAATGTCTTTTTTTTGCTTGGACAAAGAAGAAGGAACCATGGTTAAGCTTCACTCGCTCGCTCACTCACTCACTCACTCACTAACTTACTCATCACCATATTTCACACATTGGAAACTTCAAATTTTACTCTCTCTCTTTTTTTCTTTTTTTGTCTTTTTGTTAGTCAAGTCTCTGCTCTGCTCGTTCAATGACTTTGCTGCAGAGACTCTCAGACCTCAAGTGAAACTCATAAATGTCTCTGCTCTTTTGCACCATAGTTGATTTTTTCTCACCAGAGGCATTGTCCTAATACAGAGCATGTAAACGTTTTTTCTAATAATATATTTAAGTGAA
CDS Sequence
- >AT1G04620.1
ATGATTACTGTCGTCACCTCCAGGCTCTCTCTCCTTCCTCCAGTCTTCTCCGTCGTTAACTCTTCTTCTTCGCGTTCCAAAGATATGAATCTAGAGCCAAAAAAGAAGGTTAAATTAAGAGAAGACTGGAGAGAAAAGTCCAGACCTATCCCACCCGGAGGAACCTATCCAGCTAAAGACCATTGCAGTCAGTGCGGGCTATGCGACACCTACTACATTGCCCATGTGAAGGAGGCATGTGCATTTCTTGGAGATGGAATGTCAAGGATTGAGAGCTTGGAACCTGTTGTGCATGGTAGAGGAAGGAAAGCAGATTCCTTACAAGATACATATTTTGGGGTGCATCAAGAGCAGCTCTATGCTCGTAAGTTGAAGCCTGTCGAAGGAGCTCAGTGGACTGGAATTGTCACAACCATAGCCATTGAGATGCTGAAATCTAATATGGTTGAAGCTGTCGTTTGTGTGCAGAGTGATCCTGAAGACAGATTATCTCCAAGACCAGTATTAGCCAGGACACCTGAAGAAGTTTTGGCTGCAAGAGGTGTCAAGCCAACTCTGTCTCCTAATCTGAATACTCTTGAATTAATCGAGGCTTCCGGAGTGAAGCGTCTTCTGTTTTGCGGTGTGGGTTGCCAAGTGCAAGCATTGAGATCAGTGGAGCAGCATCTGAATCTGGAAAAGTTGTATGTACTAGGCACCAATTGTGTGGACAACGGAACACGAGATGGACTAGACAAGTTTCTGAAAGCAGCTAGTAAAGAGCCAGAGACTGTTCTCCATTATGAATTTATGCAAGATTACAAGGTCCAACTCAAACACTTGGATGGACACATTGAAGAGGTTCCCTATTTCTCTCTACCTGCAAACGATTTAGTAGATGTCATAGCTCCATCGTGTTACAGCTGCTTTGATTACACAAATGCATTAGCGGATTTGGTTATCGGTTACATGGGTGTTCCGAAGTATTCAGGTCTGAACATGACTGACCATCCACAGTATATTACAGTGAGAAATGAACGTGGGAAAGAAATGCTCAGCTTGGTAGAAAACCTTTTGGAGATCACTCCAACAATCAGCAGCGGTGATCGGCGACCTTTTGTGACAGAAACTGTTAAGGCAGACGATGCTGCTAAGTTTGGTCAAGGTCCTGCTCAGCCAGCGCCACTATTTGTTGGAAACATTATTGCGTTCATCCTAAATTTGGTTGGTCCTAAGGGTCTAGAATTTGCTCGGTACTCGTTGGACTACCATACCATCAGAAACTATTTGTACGTAAACCGCAAATGGGGAAAGCAAAGAGCAAACACCCACATGCCATCATATGCCAAAAAGATAGTGGAAATGTACAACAAAAACGGCCAAATAGATAAAATGCTCTCCAAGAAATGA
Protein Sequence
- >AT1G04620.1
MITVVTSRLSLLPPVFSVVNSSSSRSKDMNLEPKKKVKLREDWREKSRPIPPGGTYPAKDHCSQCGLCDTYYIAHVKEACAFLGDGMSRIESLEPVVHGRGRKADSLQDTYFGVHQEQLYARKLKPVEGAQWTGIVTTIAIEMLKSNMVEAVVCVQSDPEDRLSPRPVLARTPEEVLAARGVKPTLSPNLNTLELIEASGVKRLLFCGVGCQVQALRSVEQHLNLEKLYVLGTNCVDNGTRDGLDKFLKAASKEPETVLHYEFMQDYKVQLKHLDGHIEEVPYFSLPANDLVDVIAPSCYSCFDYTNALADLVIGYMGVPKYSGLNMTDHPQYITVRNERGKEMLSLVENLLEITPTISSGDRRPFVTETVKADDAAKFGQGPAQPAPLFVGNIIAFILNLVGPKGLEFARYSLDYHTIRNYLYVNRKWGKQRANTHMPSYAKKIVEMYNKNGQIDKMLSKK