Gene Details:

• Gene ID: AT1G04220
• Gene Symbol: DAISY, KCS2
• Gene Name: DAISY, 3-ketoacyl-CoA synthase 2
• Description: 3-ketoacyl-CoA synthase 2;(source:Araport11)
• TAIR Accession: locus:2020215
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G04220.1

Plant Ontology Annotations:

• PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
• PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
• PO:0009001  — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0006970  — acts upstream of or within — response to osmotic stress
• GO:0005737  — located in — cytoplasm
• GO:0010345  — acts upstream of or within — suberin biosynthetic process
• GO:0009922  — enables — fatty acid elongase activity
• GO:0006633  — involved in — fatty acid biosynthetic process
• GO:0009611  — acts upstream of or within — response to wounding
• GO:0005783  — located in — endoplasmic reticulum

Germplasm Phenotype:

• CS71727  — Reduced root growth and amount of epicuticular wax crystals.
• CS71729  — Glossy green appearance due to significant reduction of the amount of epicuticular wax crystals on stems and siliques. Total wax content decreased in stems and leaves. Roots exhibit growth retardation and abnormal lamellation of the suberin layer in the endodermis. Accumulation of C20 very-long-chain fatty acid (VLCFA) derivatives and reduction of C22 and C24 VLCFA derivatives compared to single mutants kcs2/daisy-1 (CS71727) and kcs20 (CS71728).
• SALK_033206C  — no obvious phenotype
• daisy-2  — significantly reduced root growth

Function-related keywords:

• inflorescence meristem ,  seed ,  carpel ,  petal ,  stem ,  pollen ,  cauline leaf ,  fruit ,  root ,  flower ,  stem ,  guard cell

Literature:

• The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper.   DOI:  10.1093/pcp/pcf077 ;  PMID:  12040093
• Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members.   DOI:  10.1111/j.1365-313X.2009.03797.x ;  PMID:  19154202
• Long-chain acyl-CoA oxidases of Arabidopsis.   DOI:  10.1046/j.1365-313x.1999.00559.x ;  PMID:  10571860
• Promoter trapping of a novel medium-chain acyl-CoA oxidase, which is induced transcriptionally during Arabidopsis seed germination.   DOI:  10.1074/jbc.M004945200 ;  PMID:  10918060
• Mutations in Arabidopsis acyl-CoA oxidase genes reveal distinct and overlapping roles in beta-oxidation.   DOI:  10.1111/j.1365-313X.2005.02343.x ;  PMID:  15743450
• Sucrose rescues seedling establishment but not germination of Arabidopsis mutants disrupted in peroxisomal fatty acid catabolism.   DOI:  10.1111/j.1365-313X.2005.02498.x ;  PMID:  16146525
• IBR3, a novel peroxisomal acyl-CoA dehydrogenase-like protein required for indole-3-butyric acid response.   DOI:  10.1007/s11103-007-9134-2 ;  PMID:  17277896
• Peroxisomal metabolism of propionic acid and isobutyric acid in plants.   DOI:  10.1074/jbc.M701028200 ;  PMID:  17580301
• CATALASE2 Coordinates SA-Mediated Repression of Both Auxin Accumulation and JA Biosynthesis in Plant Defenses.   DOI:  10.1016/j.chom.2017.01.007 ;  PMID:  28182949
• CATALASE2 functions for seedling postgerminative growth by scavenging H(2) O(2) and stimulating ACX2/3 activity in Arabidopsis.   DOI:  10.1111/pce.13031 ;  PMID:  28722222
• and medium-chain acyl-CoA oxidase activities accumulate acyl-CoAs and reveal that fatty acid beta-oxidation is essential for embryo development.   DOI:  10.1074/jbc.M300826200 ;  PMID:  12682048
• Peroxisomal Acyl-CoA oxidase 4 activity differs between Arabidopsis accessions.   DOI:  10.1007/s11103-011-9843-4 ;  PMID:  22048901
• Plant copper chaperones.   DOI:  10.1042/bst0300732 ;  PMID:  12196180
• Cuticular waxes on eceriferum mutants of Arabidopsis thaliana.   DOI:  10.1016/s0031-9422(00)00513-6 ;  PMID:  11336252
• Lipid utilization, gluconeogenesis, and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase.   DOI:  10.1074/jbc.M407380200 ;  PMID:  15272001
• The Acyl Desaturase CER17 Is Involved in Producing Wax Unsaturated Primary Alcohols and Cutin Monomers.   DOI:  10.1104/pp.16.01956 ;  PMID:  28069670
• An Arabidopsis GSK3/shaggy-like gene that complements yeast salt stress-sensitive mutants is induced by NaCl and abscisic acid.   DOI:  10.1104/pp.119.4.1527 ;  PMID:  10198112
• Constitutive over-expression of AtGSK1 induces NaCl stress responses in the absence of NaCl stress and results in enhanced NaCl tolerance in Arabidopsis.   DOI:  10.1046/j.1365-313x.2001.01099.x ;  PMID:  11532176
• Glycogen synthase kinase 3/SHAGGY-like kinases in plants: an emerging family with novel functions.   DOI:  10.1016/s1360-1385(02)02331-2 ;  PMID:  12399181
• Expression profiling of the whole Arabidopsis shaggy-like kinase multigene family by real-time reverse transcriptase-polymerase chain reaction.   DOI:  10.1104/pp.009175 ;  PMID:  12376626
• Organization and expression of the GSK3/shaggy kinase gene family in the moss Physcomitrella patens suggest early gene multiplication in land plants and an ancestral response to osmotic stress.   DOI:  10.1007/s00239-004-0302-6 ;  PMID:  16007489
• BIN2 functions redundantly with other Arabidopsis GSK3-like kinases to regulate brassinosteroid signaling.   DOI:  10.1104/pp.109.138099 ;  PMID:  19395409
• BSKs are partially redundant positive regulators of brassinosteroid signaling in Arabidopsis.   DOI:  10.1111/tpj.12175 ;  PMID:  23496207
• Brassinosteroids control root epidermal cell fate via direct regulation of a MYB-bHLH-WD40 complex by GSK3-like kinases.   DOI:  10.7554/eLife.02525 ;  PMID:  24771765
• Plant GSK3 proteins regulate xylem cell differentiation downstream of TDIF-TDR signalling.   DOI:  10.1038/ncomms4504 ;  PMID:  24662460
• GSK3-like kinases positively modulate abscisic acid signaling through phosphorylating subgroup III SnRK2s in Arabidopsis.   DOI:  10.1073/pnas.1316717111 ;  PMID:  24928519

Sequences: