AT1G04180

Gene Details:

Gene ID: AT1G04180
Gene Symbol: YUC9, YUCCA9
Gene Name: YUCCA 9
Description: YUCCA 9;(source:Araport11)
TAIR Accession: locus:2020250
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Transcripts:

AT1G04180.1

Gene Ontology:

GO:0010262 — acts upstream of or within — somatic embryogenesis
GO:0009851 — involved in — auxin biosynthetic process
GO:0004499 — enables — N,N-dimethylaniline monooxygenase activity
GO:0050660 — enables — flavin adenine dinucleotide binding
GO:0009723 — acts upstream of or within — response to ethylene
GO:0009635 — acts upstream of or within — response to herbicide
GO:0004497 — enables — monooxygenase activity
GO:0103075 — enables — indole-3-pyruvate monooxygenase activity
GO:0050661 — enables — NADP binding

Germplasm Phenotype:

CS69869 — Disruption of shade avoidance response reflected in failure to increase hypocotyl and petiole length under end-of-the-day far-red light treatment and under low red to far-red conditions. Reduced fertility.
CS69942 — Reduced hypocotyl and petiole length under end-of-day far-red light treatment (EOD-FR). Slight reduction in hypocotyl length under both high and low red to far-red (R:FR) conditions.

Literature:

Sequences:

cDNA Sequence

>AT1G04180.1
AAACCAATAGATCTCATTTCTCATAATACAACAAAAACTAACATTCAACTTCACTACATATACTTTCAAATCGATCAAAACCCACCCTCAAAACATATACTTGCTTTCATTCAAAAACTCACTCAAGAAAATGGAGAATATGTTTAGACTCATGGCAAGTGAAGAATATTTCTCAGAGCGGCGATGTGTTTGGGTCAACGGTCCGGTTATCGTAGGAGCTGGTCCATCCGGTTTAGCTACAGCAGCTTGTCTACATGATCAAGGAGTCCCATTCGTTGTGGTCGAGAGATCAGATTGCATAGCGTCACTGTGGCAAAAACGAACCTACGATAGGCTCAAGCTTCACTTGCCCAAGAAATTCTGCCAATTACCGAAAATGCCCTTCCCGGATCACTACCCTGAATACCCAACGAAACGACAGTTCATCGATTACCTTGAGTCATACGCAAACCGGTTCGATATTAAACCGGAGTTTAATAAAAGCGTTGAGTCTGCTCGGTTTGATGAAACTAGCGGGCTATGGAGGGTTAGAACAACCTCAGACGGAGAGGAGATGGAATATATTTGCCGGTGGTTGGTGGTGGCGACGGGAGAAAACGCCGAACGTGTTGTCCCAGAGATTAATGGTCTTATGACGGAGTTTGACGGAGAAGTGATTCACGCTTGTGAGTATAAGTCCGGCGAGAAATTCAGAGGAAAGAGAGTTCTTGTCGTCGGATGTGGAAACTCAGGCATGGAAGTCTCTCTTGATCTTGCTAACCACAATGCAATTACTTCCATGGTCGTTAGAAGCTCGGTTCATGTTTTACCGAGGGAGATTATGGGGAAATCAACATTTGGAATCTCAGTGATGATGATGAAGTGGCTACCTTTATGGCTCGTAGACAAGCTTCTGCTTATCTTATCGTGGTTGGTTCTAGGGAGCTTATCAAACTATGGGCTTAAAAGGCCTGACATCGGCCCAATGGAGCTTAAAAGCATGACAGGAAAGACGCCGGTTCTTGACATCGGTGCTCTGGAGAAGATAAAATCCGGCGACGTAGAAATTGTACCTGCAATCAAACAGTTCTCGCGTCACCACGTGGAGCTCGTAGATGGTCAGAAGCTAGATATCGACGCTGTGGTTCTCGCCACCGGTTATCGTAGCAACGTCCCTTCTTGGCTTCAGGAAAGTGAGTTCTTTTCGAAAAATGGGTTTCCGAAATCGCCGTTTCCAAACGCGTGGAAAGGGAAATCGGGATTATACGCGGCCGGATTCACGAGAAAAGGGTTGGCTGGAGCATCAGTAGACGCCGTTAACATCGCTCAAGACATTGGAAATGTGTGGAGAGAAGAGACCAAACGACAGAAGATGAGAAGAAATGTGGGTCACCGAAGATGCATCTCAGTTGCTTAAGCCTCACGTTAGGGGTTTTCAATAGGATATATATAAATAAATCGATTTATTTGTAAAAATATACAAAAGGAAAAATGTAAAATAGAGTAAAGAGAGCCCTCTCCTGAAGTCCCCGCCTGTTTTTTTTATTACACAGCTGTAGGGGCGTTTTGTAAAATTAGGATGATGTGGCTCTCTTATTTTTTTTTTATTACCAATTTACCATATATGCTTATGTAAAACCTTTATGGAGGTAAATCAAAATTAGTGTTTG

CDS Sequence

>AT1G04180.1
ATGGAGAATATGTTTAGACTCATGGCAAGTGAAGAATATTTCTCAGAGCGGCGATGTGTTTGGGTCAACGGTCCGGTTATCGTAGGAGCTGGTCCATCCGGTTTAGCTACAGCAGCTTGTCTACATGATCAAGGAGTCCCATTCGTTGTGGTCGAGAGATCAGATTGCATAGCGTCACTGTGGCAAAAACGAACCTACGATAGGCTCAAGCTTCACTTGCCCAAGAAATTCTGCCAATTACCGAAAATGCCCTTCCCGGATCACTACCCTGAATACCCAACGAAACGACAGTTCATCGATTACCTTGAGTCATACGCAAACCGGTTCGATATTAAACCGGAGTTTAATAAAAGCGTTGAGTCTGCTCGGTTTGATGAAACTAGCGGGCTATGGAGGGTTAGAACAACCTCAGACGGAGAGGAGATGGAATATATTTGCCGGTGGTTGGTGGTGGCGACGGGAGAAAACGCCGAACGTGTTGTCCCAGAGATTAATGGTCTTATGACGGAGTTTGACGGAGAAGTGATTCACGCTTGTGAGTATAAGTCCGGCGAGAAATTCAGAGGAAAGAGAGTTCTTGTCGTCGGATGTGGAAACTCAGGCATGGAAGTCTCTCTTGATCTTGCTAACCACAATGCAATTACTTCCATGGTCGTTAGAAGCTCGGTTCATGTTTTACCGAGGGAGATTATGGGGAAATCAACATTTGGAATCTCAGTGATGATGATGAAGTGGCTACCTTTATGGCTCGTAGACAAGCTTCTGCTTATCTTATCGTGGTTGGTTCTAGGGAGCTTATCAAACTATGGGCTTAAAAGGCCTGACATCGGCCCAATGGAGCTTAAAAGCATGACAGGAAAGACGCCGGTTCTTGACATCGGTGCTCTGGAGAAGATAAAATCCGGCGACGTAGAAATTGTACCTGCAATCAAACAGTTCTCGCGTCACCACGTGGAGCTCGTAGATGGTCAGAAGCTAGATATCGACGCTGTGGTTCTCGCCACCGGTTATCGTAGCAACGTCCCTTCTTGGCTTCAGGAAAGTGAGTTCTTTTCGAAAAATGGGTTTCCGAAATCGCCGTTTCCAAACGCGTGGAAAGGGAAATCGGGATTATACGCGGCCGGATTCACGAGAAAAGGGTTGGCTGGAGCATCAGTAGACGCCGTTAACATCGCTCAAGACATTGGAAATGTGTGGAGAGAAGAGACCAAACGACAGAAGATGAGAAGAAATGTGGGTCACCGAAGATGCATCTCAGTTGCTTAA

Protein Sequence

>AT1G04180.1
MENMFRLMASEEYFSERRCVWVNGPVIVGAGPSGLATAACLHDQGVPFVVVERSDCIASLWQKRTYDRLKLHLPKKFCQLPKMPFPDHYPEYPTKRQFIDYLESYANRFDIKPEFNKSVESARFDETSGLWRVRTTSDGEEMEYICRWLVVATGENAERVVPEINGLMTEFDGEVIHACEYKSGEKFRGKRVLVVGCGNSGMEVSLDLANHNAITSMVVRSSVHVLPREIMGKSTFGISVMMMKWLPLWLVDKLLLILSWLVLGSLSNYGLKRPDIGPMELKSMTGKTPVLDIGALEKIKSGDVEIVPAIKQFSRHHVELVDGQKLDIDAVVLATGYRSNVPSWLQESEFFSKNGFPKSPFPNAWKGKSGLYAAGFTRKGLAGASVDAVNIAQDIGNVWREETKRQKMRRNVGHRRCISVA