Information report for AT1G04100
Gene Details
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Functional Descriptions
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0042802 — enables — identical protein binding
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Involvement of ethylene and hydrogen peroxide in induction of alternative respiratory pathway in salt-treated Arabidopsis calluses. DOI: 10.1093/pcp/pcq134 ; PMID: 20801923
- The Arabidopsis vacuolar anion transporter, AtCLCc, is involved in the regulation of stomatal movements and contributes to salt tolerance. DOI: 10.1111/j.1365-313X.2010.04352.x ; PMID: 20822503
- The R-R-type MYB-like transcription factor, AtMYBL, is involved in promoting leaf senescence and modulates an abiotic stress response in Arabidopsis. DOI: 10.1093/pcp/pcq180 ; PMID: 21097474
- Wheat mitochondrial proteomes provide new links between antioxidant defense and plant salinity tolerance. DOI: 10.1021/pr1007834 ; PMID: 21043471
- Arabidopsis floral initiator SKB1 confers high salt tolerance by regulating transcription and pre-mRNA splicing through altering histone H4R3 and small nuclear ribonucleoprotein LSM4 methylation. DOI: 10.1105/tpc.110.081356 ; PMID: 21258002
- Improved drought and salt tolerance of Arabidopsis thaliana by transgenic expression of a novel DREB gene from Leymus chinensis. DOI: 10.1007/s00299-011-1058-2 ; PMID: 21509473
- Transcriptome sequencing of a highly salt tolerant mangrove species Sonneratia alba using Illumina platform. DOI: 10.1016/j.margen.2011.03.005 ; PMID: 21620334
- cGMP regulates hydrogen peroxide accumulation in calcium-dependent salt resistance pathway in Arabidopsis thaliana roots. DOI: 10.1007/s00425-011-1439-3 ; PMID: 21617988
- Nuclear localization and interaction with COP1 are required for STO/BBX24 function during photomorphogenesis. DOI: 10.1104/pp.111.180208 ; PMID: 21685177
- Cloning and characterization of a maize SnRK2 protein kinase gene confers enhanced salt tolerance in transgenic Arabidopsis. DOI: 10.1007/s00299-011-1077-z ; PMID: 21638061
- An AP2 domain-containing gene, ESE1, targeted by the ethylene signaling component EIN3 is important for the salt response in Arabidopsis. DOI: 10.1104/pp.111.179028 ; PMID: 21832142
- The role of TaCHP in salt stress responsive pathways. DOI: 10.4161/psb.7.1.18547 ; PMID: 22301971
- Arabidopsis STO/BBX24 negatively regulates UV-B signaling by interacting with COP1 and repressing HY5 transcriptional activity. DOI: 10.1038/cr.2012.34 ; PMID: 22410790
- Molecular cloning and functional characterization of a novel apple MdCIPK6L gene reveals its involvement in multiple abiotic stress tolerance in transgenic plants. DOI: 10.1007/s11103-012-9899-9 ; PMID: 22382993
- Improvement of drought and salt tolerance in Arabidopsis and Lotus corniculatus by overexpression of a novel DREB transcription factor from Populus euphratica. DOI: 10.1016/j.gene.2012.06.089 ; PMID: 22771912
- Identification and characterization of orthologs of AtNHX5 and AtNHX6 in Brassica napus. DOI: 10.3389/fpls.2012.00208 ; PMID: 22973287
- Arabidopsis SOS3 plays an important role in salt tolerance by mediating calcium-dependent microfilament reorganization. DOI: 10.1007/s00299-012-1348-3 ; PMID: 23052592
- H(2) enhances arabidopsis salt tolerance by manipulating ZAT10/12-mediated antioxidant defence and controlling sodium exclusion. DOI: 10.1371/journal.pone.0049800 ; PMID: 23185443
- A novel salt-induced gene from sheepgrass, LcSAIN2, enhances salt tolerance in transgenic Arabidopsis. DOI: 10.1016/j.plaphy.2012.12.014 ; PMID: 23353766
- Increased sensitivity to salt stress in tocopherol-deficient Arabidopsis mutants growing in a hydroponic system. DOI: 10.4161/psb.23136 ; PMID: 23299430
Gene Resources
- UniProt: A0A178W8Y8
- EMBL: LUHQ01000001
- AlphaFoldDB: A0A178W8Y8
- EnsemblPlants: AT1G04100.1
- Gramene: AT1G04100.1
- KEGG: ath:AT1G04100
- Orthologous matrix: MFFQIPS
- ExpressionAtlas: AT1G04100
- InterPro: IPR003311, IPR033389, IPR053793
- PANTHER: PTHR31734, PTHR31734:SF136
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- SWISS-MODEL: A0A178W8Y8
Homologs
- Capsicum annuum T459_07906
- Glycine max GmIAA9;qSW2, Glyma.10G180100
- Gossypium hirsutum Gohir.A09G222400, Gohir.D09G224500
- Juglans regia Jr12_15120
- Lactuca sativa gene-LSAT_3X125741
- Malus domestica MdIAA121
- Nicotiana attenuata A4A49_37462
- Oryza sativa OsIAA10
- Rosa chinensis RchiOBHm_Chr6g0289571
- Sesamum indicum SIN_1002570
Sequences
cDNA Sequence
- >AT1G04100.1
CGCACACATTCGTGTACCGTTTCCGATTTTTCGTTCCTCCAATTTCATTCTCTCTCTCTTTAAGAAAAATTCCTTGTTTTTGATCCGAGAATCGAAGTCGCCCTCGAATCAAGATTAAAACCTCGTTTAGTTCTCAATTTCAGTTCTGTGGATCCGTGCGTGACCTCAAGTTTTTTTTTTTTTTCTGTCTCGAAATTCAGAATCGTAGAGGTGTTGAAAGTTGAAACCTTTTTTTTGGTTTGCTTGGTTAATGGGTTTCTTCAAACTTGATCGATAATTGGATTTGAATCAAGGGTTTTAGTGTTCTTGCTTTGTGTATTCGTTTGGCAATTTGGGATAATGAATGGTTTGCAAGAAGTTTGTTCGTCAAGTGGGTCGGTGATGATCGGACTACCAGCTGAAGAAGACGAAAACGCCGCACATTCGTCGGAGGATTCATCTTGCCCCGACGAGTCAGTGTCAGAGACAGAGCTCGACCTAGCTTTGGGTCTTAGCATTGGTCGTCGGAAGGTTCGATCGTCTTTGTCTTCCTCGTCTTCTTCTCTGACCAGGGAAAGTGGGACCAAACGCTCTGCTGATTCTTCTCCGGCTGCCGCCTCAAACGCAACCAGACAAGTTGCTGTAGGTTGGCCGCCTCTACGGACTTACAGAATCAACAGTTTGGTCAATCAAGCAAAGTCTTTAGCTACGGAAGGCGGCTTGAGTTCTGGCATTCAAAAGGAGACTACAAAAAGTGTAGTGGTTGCTGCTAAGAACGATGATGCTTGCTTTATCAAATCGTCCAGGACTTCTATGCTTGTGAAGGTGACAATGGACGGAGTTATAATTGGAAGGAAGGTTGATCTCAATGCTCTGGATTCTTATGCAGCCTTAGAGAAAACTTTGGATCTAATGTTTTTCCAGATTCCTTCTCCTGTAACAAGATCCAACACACAAGGATACAAGACAATTAAGGAAACATGTACTTCGAAATTACTGGATGGCTCATCGGAATATATCATAACATATCAAGATAAAGACGGAGATTGGATGCTTGTAGGAGATGTTCCTTGGCAGATGTTCCTCGGGTCTGTGACAAGACTGAGAATCATGAAGACATCAATTGGAGCTGGAGTAGGTAAGTAGAGAGTCCTATATAGCAAAAACAGTTTACATCTCTTTGGTCTGTAACTCATATATCACATTCACATATATACATGTGCATATGTTTATACATGAGTGTACATATGTCTTGTGGTCGTTTGTGAATATCAAACAACAGCTTAACCTTGTCTTTAAAGATCTTTGTATATTTAGGGTTTTTCACTC
CDS Sequence
- >AT1G04100.1
ATGAATGGTTTGCAAGAAGTTTGTTCGTCAAGTGGGTCGGTGATGATCGGACTACCAGCTGAAGAAGACGAAAACGCCGCACATTCGTCGGAGGATTCATCTTGCCCCGACGAGTCAGTGTCAGAGACAGAGCTCGACCTAGCTTTGGGTCTTAGCATTGGTCGTCGGAAGGTTCGATCGTCTTTGTCTTCCTCGTCTTCTTCTCTGACCAGGGAAAGTGGGACCAAACGCTCTGCTGATTCTTCTCCGGCTGCCGCCTCAAACGCAACCAGACAAGTTGCTGTAGGTTGGCCGCCTCTACGGACTTACAGAATCAACAGTTTGGTCAATCAAGCAAAGTCTTTAGCTACGGAAGGCGGCTTGAGTTCTGGCATTCAAAAGGAGACTACAAAAAGTGTAGTGGTTGCTGCTAAGAACGATGATGCTTGCTTTATCAAATCGTCCAGGACTTCTATGCTTGTGAAGGTGACAATGGACGGAGTTATAATTGGAAGGAAGGTTGATCTCAATGCTCTGGATTCTTATGCAGCCTTAGAGAAAACTTTGGATCTAATGTTTTTCCAGATTCCTTCTCCTGTAACAAGATCCAACACACAAGGATACAAGACAATTAAGGAAACATGTACTTCGAAATTACTGGATGGCTCATCGGAATATATCATAACATATCAAGATAAAGACGGAGATTGGATGCTTGTAGGAGATGTTCCTTGGCAGATGTTCCTCGGGTCTGTGACAAGACTGAGAATCATGAAGACATCAATTGGAGCTGGAGTAGGTAAGTAG
Protein Sequence
- >AT1G04100.1
MNGLQEVCSSSGSVMIGLPAEEDENAAHSSEDSSCPDESVSETELDLALGLSIGRRKVRSSLSSSSSSLTRESGTKRSADSSPAAASNATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVGK