Information report for AT1G04010
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , plant sperm cell , guard cell
Literature and News
- UV-B induction of the E3 ligase ARIADNE12 depends on CONSTITUTIVELY PHOTOMORPHOGENIC 1. DOI: 10.1016/j.plaphy.2015.03.006 ; PMID: 25817546
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Evidence for base excision repair of oxidative DNA damage in chloroplasts of Arabidopsis thaliana. DOI: 10.1074/jbc.M109.008342 ; PMID: 19372224
- A Conserved Long Intergenic Non-coding RNA Containing snoRNA Sequences, lncCOBRA1, Affects Arabidopsis Germination and Development. DOI: 10.3389/fpls.2022.906603 ; PMID: 35693169
- Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. DOI: 10.1093/nar/gkf660 ; PMID: 12466527
- The Arabidopsis acetylated histone-binding protein BRAT1 forms a complex with BRP1 and prevents transcriptional silencing. DOI: 10.1038/ncomms11715 ; PMID: 27273316
- Analysis of the arabidopsis REM gene family predicts functions during flower development. DOI: 10.1093/aob/mcu124 ; PMID: 25002525
- Molecular and functional characterization of a family of amino acid transporters from Arabidopsis. DOI: 10.1104/pp.104.045278 ; PMID: 15377779
- A nanodomain-anchored scaffolding complex is required for the function and localization of phosphatidylinositol 4-kinase alpha in plants. DOI: 10.1093/plcell/koab135 ; PMID: 34010411
- A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. DOI: 10.1073/pnas.1710683114 ; PMID: 28808009
- The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts. DOI: 10.1111/tpj.14148 ; PMID: 30407670
- The Arabidopsis PHD-finger protein EDM2 has multiple roles in balancing NLR immune receptor gene expression. DOI: 10.1371/journal.pgen.1008993 ; PMID: 32925902
- Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis. DOI: 10.1111/jipb.13068 ; PMID: 33438356
Gene Resources
- UniProt: A0A178W9Q7
- EMBL: CACRSJ010000104, CACSHJ010000087, LUHQ01000001
- AlphaFoldDB: A0A178W9Q7
- EnsemblPlants: AT1G04010.1
- Gramene: AT1G04010.1
- KEGG: ath:AT1G04010
- Orthologous matrix: ARRMCNS
- ExpressionAtlas: AT1G04010
- InterPro: IPR003386, IPR029058
- PANTHER: PTHR11440
- SUPFAM: SSF53474
- Gene3D: 3.40.50.1820
- OrthoDB: A0A178W9Q7
- SWISS-MODEL: A0A178W9Q7
Homologs
- Glycine max GmPDAT
Sequences
cDNA Sequence
- >AT1G04010.1
GAAAGTTAGGACGCTTCCAAAAACTTTTCAACTCTCACCTTCAAGGTCCCCAACAACGCACACACTCTCTCTCTCTCCTCTCTCTTACTTTTCCTCCTAAACTCTGGCGATGAAAAGTAGTTAGAGACACCGAGCGATGGGAGCGAATTCGAAATCAGTAACGGCTTCCTTCACCGTCATCGCCGTTTTTTTCTTGATTTGCGGTGGCCGAACTGCGGTGGAGGATGAGACCGAGTTTCACGGCGACTACTCGAAGCTATCGGGTATAATCATTCCGGGATTTGCGTCGACGCAGCTACGAGCGTGGTCGATCCTTGACTGTCCATACACTCCGTTGGACTTCAATCCGCTCGACCTCGTATGGCTAGACACCACTAAGCTTCTTTCTGCTGTCAACTGCTGGTTTAAGTGTATGGTGCTAGATCCTTATAATCAAACAGACCATCCCGAGTGTAAGTCACGGCCTGACAGTGGTCTTTCAGCCATCACAGAATTGGATCCAGGTTACATAACAGGTCCTCTTTCTACTGTCTGGAAAGAGTGGCTTAAGTGGTGTGTTGAGTTTGGTATAGAAGCAAATGCAATTGTCGCTGTTCCATACGATTGGAGATTGTCACCAACCAAATTGGAAGAGCGTGACCTTTACTTTCACAAGCTCAAGTTGACCTTTGAAACTGCTTTAAAACTCCGTGGCGGCCCTTCTATAGTATTTGCCCATTCAATGGGTAATAATGTCTTCAGATACTTTCTGGAATGGCTGAGGCTAGAAATTGCACCAAAACATTATTTGAAGTGGCTTGATCAGCATATCCATGCTTATTTCGCTGTTGGAGCTCCTCTTCTTGGTTCTGTTGAGGCAATCAAATCTACTCTCTCTGGTGTAACGTTTGGCCTTCCTGTTTCTGAGGGAACTGCTCGGTTGTTGTCCAATTCTTTTGCGTCGTCATTGTGGCTTATGCCATTTTCAAAGAATTGCAAGGGTGATAACACATTCTGGACGCATTTTTCTGGGGGTGCTGCAAAGAAAGATAAGCGCGTATACCACTGTGATGAAGAGGAATATCAATCAAAATATTCTGGCTGGCCGACAAATATTATTAACATTGAAATTCCTTCCACTAGCGTTACAGAAACAGCTCTAGTCAACATGACCAGCATGGAATGTGGCCTTCCCACCCTTTTGTCTTTCACAGCCCGTGAACTAGCAGATGGGACTCTTTTCAAAGCAATAGAAGACTATGACCCAGATAGCAAGAGGATGTTACACCAGTTAAAGAAGTTGTATCATGATGACCCTGTTTTTAATCCTCTGACTCCTTGGGAGAGACCACCTATAAAAAATGTATTTTGCATATATGGTGCTCATCTAAAGACAGAGGTTGGTTATTACTTTGCCCCAAGTGGCAAACCTTATCCTGATAATTGGATCATCACGGATATCATTTATGAAACTGAAGGTTCCCTCGTGTCAAGGTCTGGAACTGTGGTTGATGGGAACGCTGGACCTATAACTGGGGATGAGACGGTACCCTATCATTCACTCTCTTGGTGCAAGAATTGGCTCGGACCTAAAGTTAACATAACAATGGCTCCCCAGCCAGAACACGATGGAAGCGACGTACATGTGGAACTAAATGTTGATCATGAGCATGGGTCAGACATCATAGCTAACATGACAAAAGCACCAAGGGTTAAGTACATAACCTTTTATGAAGACTCTGAGAGCATTCCGGGGAAGAGAACCGCAGTCTGGGAGCTTGATAAAACAAATCACAGGAACATAGTAAGATCTCCAGTTCTGATGAGGGAGTTATGGCTTCAGATGTGGCATGACATTCAGCCTGGTGCAAAGTCCAAATTTGTCACCAAAGCCAAGCGCGGGCCACTTAGAGATGCGGATTGCTACTGGGATTACGGGAAAGCCTGTTGTGCTTGGCAAGAATACTGTGAATACAGATACAGTTTTGGGGATGTTCACTTAGGACAAAGTTGTAGATTGAGGAACACATCTGCTAATATGCTTCTCCAGTACATATAAATTTCTTCGTTCAGCAAATGACCATTCCTTCTTCTTCATTTTCTTCTCCCAGTAAGAGGTAAAAAAAAAAGGGGTTTAAAACGGTCAATTCTTATTGCTCTCTCTATTTCTCACGCAAAGGTATTCTTTGTGATTTTTTTTTCTATTACGAGCAATATGATAGACAGTTTGGGTACAGCTAAGAGTGCAGTCACTTTGAACTTACCGGCTAAAGTAGTAAATCCATATGAAAACAATGTAGAGTTTTTTTTTTTTAACTACAAGTGCGATTTGGTCTCTTCCGTTTTGATGGAGAGAAACAGAACAATTCTGAGTATGTTCTTGCTTTTGGTTGGTACCATTTCCCTCTTTAGCTTATTGGGTACAAAATTGTATGATGATTAAATCAGAAAAAAAAAAAAAGACGGTGAAGATTTTGGTTGAATTTTTATTTCTCATCTGTTTGATTGTTTCAAATGTAGCATTTGAGTTGGCAGTCAATATGATAAAGACGACACTTTTGTATTTAACGTCTGAAGTTATAGAGGGATAGATAGAATATAAAGTTCCACTCACTTTCTTACATATTTAATTAATTTAATATATATGTCGTAATGTATTAAACAGTAGGCATGTATTTATTTGAATACCG
CDS Sequence
- >AT1G04010.1
ATGGGAGCGAATTCGAAATCAGTAACGGCTTCCTTCACCGTCATCGCCGTTTTTTTCTTGATTTGCGGTGGCCGAACTGCGGTGGAGGATGAGACCGAGTTTCACGGCGACTACTCGAAGCTATCGGGTATAATCATTCCGGGATTTGCGTCGACGCAGCTACGAGCGTGGTCGATCCTTGACTGTCCATACACTCCGTTGGACTTCAATCCGCTCGACCTCGTATGGCTAGACACCACTAAGCTTCTTTCTGCTGTCAACTGCTGGTTTAAGTGTATGGTGCTAGATCCTTATAATCAAACAGACCATCCCGAGTGTAAGTCACGGCCTGACAGTGGTCTTTCAGCCATCACAGAATTGGATCCAGGTTACATAACAGGTCCTCTTTCTACTGTCTGGAAAGAGTGGCTTAAGTGGTGTGTTGAGTTTGGTATAGAAGCAAATGCAATTGTCGCTGTTCCATACGATTGGAGATTGTCACCAACCAAATTGGAAGAGCGTGACCTTTACTTTCACAAGCTCAAGTTGACCTTTGAAACTGCTTTAAAACTCCGTGGCGGCCCTTCTATAGTATTTGCCCATTCAATGGGTAATAATGTCTTCAGATACTTTCTGGAATGGCTGAGGCTAGAAATTGCACCAAAACATTATTTGAAGTGGCTTGATCAGCATATCCATGCTTATTTCGCTGTTGGAGCTCCTCTTCTTGGTTCTGTTGAGGCAATCAAATCTACTCTCTCTGGTGTAACGTTTGGCCTTCCTGTTTCTGAGGGAACTGCTCGGTTGTTGTCCAATTCTTTTGCGTCGTCATTGTGGCTTATGCCATTTTCAAAGAATTGCAAGGGTGATAACACATTCTGGACGCATTTTTCTGGGGGTGCTGCAAAGAAAGATAAGCGCGTATACCACTGTGATGAAGAGGAATATCAATCAAAATATTCTGGCTGGCCGACAAATATTATTAACATTGAAATTCCTTCCACTAGCGTTACAGAAACAGCTCTAGTCAACATGACCAGCATGGAATGTGGCCTTCCCACCCTTTTGTCTTTCACAGCCCGTGAACTAGCAGATGGGACTCTTTTCAAAGCAATAGAAGACTATGACCCAGATAGCAAGAGGATGTTACACCAGTTAAAGAAGTTGTATCATGATGACCCTGTTTTTAATCCTCTGACTCCTTGGGAGAGACCACCTATAAAAAATGTATTTTGCATATATGGTGCTCATCTAAAGACAGAGGTTGGTTATTACTTTGCCCCAAGTGGCAAACCTTATCCTGATAATTGGATCATCACGGATATCATTTATGAAACTGAAGGTTCCCTCGTGTCAAGGTCTGGAACTGTGGTTGATGGGAACGCTGGACCTATAACTGGGGATGAGACGGTACCCTATCATTCACTCTCTTGGTGCAAGAATTGGCTCGGACCTAAAGTTAACATAACAATGGCTCCCCAGCCAGAACACGATGGAAGCGACGTACATGTGGAACTAAATGTTGATCATGAGCATGGGTCAGACATCATAGCTAACATGACAAAAGCACCAAGGGTTAAGTACATAACCTTTTATGAAGACTCTGAGAGCATTCCGGGGAAGAGAACCGCAGTCTGGGAGCTTGATAAAACAAATCACAGGAACATAGTAAGATCTCCAGTTCTGATGAGGGAGTTATGGCTTCAGATGTGGCATGACATTCAGCCTGGTGCAAAGTCCAAATTTGTCACCAAAGCCAAGCGCGGGCCACTTAGAGATGCGGATTGCTACTGGGATTACGGGAAAGCCTGTTGTGCTTGGCAAGAATACTGTGAATACAGATACAGTTTTGGGGATGTTCACTTAGGACAAAGTTGTAGATTGAGGAACACATCTGCTAATATGCTTCTCCAGTACATATAA
Protein Sequence
- >AT1G04010.1
MGANSKSVTASFTVIAVFFLICGGRTAVEDETEFHGDYSKLSGIIIPGFASTQLRAWSILDCPYTPLDFNPLDLVWLDTTKLLSAVNCWFKCMVLDPYNQTDHPECKSRPDSGLSAITELDPGYITGPLSTVWKEWLKWCVEFGIEANAIVAVPYDWRLSPTKLEERDLYFHKLKLTFETALKLRGGPSIVFAHSMGNNVFRYFLEWLRLEIAPKHYLKWLDQHIHAYFAVGAPLLGSVEAIKSTLSGVTFGLPVSEGTARLLSNSFASSLWLMPFSKNCKGDNTFWTHFSGGAAKKDKRVYHCDEEEYQSKYSGWPTNIINIEIPSTSVTETALVNMTSMECGLPTLLSFTARELADGTLFKAIEDYDPDSKRMLHQLKKLYHDDPVFNPLTPWERPPIKNVFCIYGAHLKTEVGYYFAPSGKPYPDNWIITDIIYETEGSLVSRSGTVVDGNAGPITGDETVPYHSLSWCKNWLGPKVNITMAPQPEHDGSDVHVELNVDHEHGSDIIANMTKAPRVKYITFYEDSESIPGKRTAVWELDKTNHRNIVRSPVLMRELWLQMWHDIQPGAKSKFVTKAKRGPLRDADCYWDYGKACCAWQEYCEYRYSFGDVHLGQSCRLRNTSANMLLQYI