Information report for AT1G03970
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Evolution and pleiotropy of TRITHORAX function in Arabidopsis. DOI: 10.1387/ijdb.082664za ; PMID: 19412892
- Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana. DOI: 10.1093/pcp/pcs021 ; PMID: 22378382
- Combinatorial functions of diverse histone methylations in Arabidopsis thaliana flowering time regulation. DOI: 10.1111/nph.12493 ; PMID: 24102415
- ATX3, ATX4, and ATX5 Encode Putative H3K4 Methyltransferases and Are Critical for Plant Development. DOI: 10.1104/pp.16.01944 ; PMID: 28550207
- ATXR2 as a core regulator of de novo root organogenesis. DOI: 10.1080/15592324.2018.1449543 ; PMID: 29517958
- Arabidopsis Trithorax histone methyltransferases are redundant in regulating development and DNA methylation. DOI: 10.1111/jipb.13406 ; PMID: 36354145
- PHYTOCHROME-INTERACTING FACTORS are involved in starch degradation adjustment via inhibition of the carbon metabolic regulator QUA-QUINE STARCH in Arabidopsis. DOI: 10.1111/tpj.16124 ; PMID: 36710626
- JMJ28 guides sequence-specific targeting of ATX1/2-containing COMPASS-like complex in Arabidopsis. DOI: 10.1016/j.celrep.2023.112163 ; PMID: 36827182
- SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis. DOI: 10.1105/tpc.014407 ; PMID: 14671020
- Ectopic deposition of lignin in the pith of stems of two Arabidopsis mutants. DOI: 10.1104/pp.123.1.59 ; PMID: 10806225
- Mutants of Arabidopsis thaliana defective in the acquisition of tolerance to high temperature stress. DOI: 10.1073/pnas.97.8.4392 ; PMID: 10760305
- Structural and genetic analysis of epidermal cell differentiation in Arabidopsis primary roots. DOI: 10.1242/dev.124.9.1789 ; PMID: 9165126
- Conditional root expansion mutants of Arabidopsis. DOI: 10.1242/dev.121.4.1237 ; PMID: 7743935
- Mutation of a chitinase-like gene causes ectopic deposition of lignin, aberrant cell shapes, and overproduction of ethylene. DOI: 10.1105/tpc.010278 ; PMID: 11826306
- KOBITO1 encodes a novel plasma membrane protein necessary for normal synthesis of cellulose during cell expansion in Arabidopsis. DOI: 10.1105/tpc.002873 ; PMID: 12215501
- Arabidopsis mutants with increased organ regeneration in tissue culture are more competent to respond to hormonal signals. DOI: 10.1007/s004250100565 ; PMID: 11678273
Gene Resources
- UniProt: Q2HIT6
- EMBL: BT024495
- AlphaFoldDB: Q2HIT6
- EnsemblPlants: AT1G03970.1
- Gramene: AT1G03970.1
- KEGG: ath:AT1G03970
- Orthologous matrix: HADHSRI
- ExpressionAtlas: AT1G03970
Homologs
- Brassica napus GSBRNA2T00150315001, GSBRNA2T00002726001, GSBRNA2T00014148001, GSBRNA2T00018780001
- Brassica oleracea XP_013638560.1
- Brassica rapa XP_009119346.1, XP_009101738.1
- Citrus sinensis orange1.1g025985m
- Raphanus raphanistrum RrC110_p8
Sequences
cDNA Sequence
- >AT1G03970.1
TTAATTAAACTTGTATATAGAGAGTAAGCGCGTGGTTACATTGCAAAACACTAGAGATAACCCTAGAAAGATCTCTCTCGATCTCTGGTTCGAAGAAAATCCACCATTTCCGATTGTTCTTTCTCTTTGACAAAACCCAGATAGATAAAAATTCGTTCCAATTCCAGTGAGCTCCGGAAATGGCGTCCTTCAAGTTGATGTCTTCTTCCAATTCCGACTTGTCTCGCCGTAATTCTTCTTCTGCTTCATCTTCCCCTTCTATAAGATCATCGCACCATCTCCGACCAAATCCTCACGCCGATCACTCCAGAATCAGTTTCGCTTACGGCGGAGGAGTCAACGATTACACTTTCGCGTCTGATTCAAAGCCCTTCGAGATGGCGATTGATGTTGATCGGAGTATCGGAGATCGGAACAGCGTTAACAACGGAAAGAGTGTTGACGATGTTTGGAAAGAGATTGTATCTGGAGAGCAAAAGACGATCATGATGAAGGAAGAAGAACCAGAAGATATAATGACACTTGAGGATTTCTTAGCGAAAGCAGAAATGGACGAGGGAGCTTCAGATGAAATCGATGTGAAGATTCCAACGGAGAGACTCAACAACGACGGTAGCTATACATTTGATTTTCCGATGCAGCGACACAGTTCGTTCCAGATGGTTGAAGGATCAATGGGTGGAGGAGTAACGAGAGGAAAGAGAGGGAGAGTGATGATGGAGGCAATGGATAAAGCTGCAGCTCAGAGACAGAAGAGGATGATCAAGAACCGTGAATCCGCTGCTAGGTCTCGAGAGAGGAAACAGGCTTATCAGGTTGAGTTAGAGACTTTGGCTGCCAAGTTAGAGGAGGAGAATGAGCAGCTTTTGAAGGAGATTGAAGAGAGCACTAAAGAGAGATACAAGAAGCTCATGGAGGTTCTGATTCCGGTCGATGAGAAACCAAGGCCACCGTCGAGGCCCTTAAGCAGGAGCCATTCCTTGGAATGGTGAAGTGTGGTAAAAAAAACTTTTGTATGTAAAAAAAATAAAAACATATGGGCTTGATTACTATATTATAATCTATATAGTAAAGTGATGGTGATATGGTTAGTACTTAGTTACCTGTAATGTATCTAAGGGATGTAATGGATAATACATAGCTTTTTGCTGATTTATAAGATATCTATGGACCAGACTAGATGGGATAAA
CDS Sequence
- >AT1G03970.1
ATGGCGTCCTTCAAGTTGATGTCTTCTTCCAATTCCGACTTGTCTCGCCGTAATTCTTCTTCTGCTTCATCTTCCCCTTCTATAAGATCATCGCACCATCTCCGACCAAATCCTCACGCCGATCACTCCAGAATCAGTTTCGCTTACGGCGGAGGAGTCAACGATTACACTTTCGCGTCTGATTCAAAGCCCTTCGAGATGGCGATTGATGTTGATCGGAGTATCGGAGATCGGAACAGCGTTAACAACGGAAAGAGTGTTGACGATGTTTGGAAAGAGATTGTATCTGGAGAGCAAAAGACGATCATGATGAAGGAAGAAGAACCAGAAGATATAATGACACTTGAGGATTTCTTAGCGAAAGCAGAAATGGACGAGGGAGCTTCAGATGAAATCGATGTGAAGATTCCAACGGAGAGACTCAACAACGACGGTAGCTATACATTTGATTTTCCGATGCAGCGACACAGTTCGTTCCAGATGGTTGAAGGATCAATGGGTGGAGGAGTAACGAGAGGAAAGAGAGGGAGAGTGATGATGGAGGCAATGGATAAAGCTGCAGCTCAGAGACAGAAGAGGATGATCAAGAACCGTGAATCCGCTGCTAGGTCTCGAGAGAGGAAACAGGCTTATCAGGTTGAGTTAGAGACTTTGGCTGCCAAGTTAGAGGAGGAGAATGAGCAGCTTTTGAAGGAGATTGAAGAGAGCACTAAAGAGAGATACAAGAAGCTCATGGAGGTTCTGATTCCGGTCGATGAGAAACCAAGGCCACCGTCGAGGCCCTTAAGCAGGAGCCATTCCTTGGAATGGTGA
Protein Sequence
- >AT1G03970.1
MASFKLMSSSNSDLSRRNSSSASSSPSIRSSHHLRPNPHADHSRISFAYGGGVNDYTFASDSKPFEMAIDVDRSIGDRNSVNNGKSVDDVWKEIVSGEQKTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSFQMVEGSMGGGVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKEIEESTKERYKKLMEVLIPVDEKPRPPSRPLSRSHSLEW