Information report for AT1G03900
Gene Details
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Functional Descriptions
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- fruit , inflorescence , cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , plant sperm cell , pollen tube cell , guard cell
Literature and News
- Biochemical Analysis of the Role of Leucine-Rich Repeat Receptor-Like Kinases and the Carboxy-Terminus of Receptor Kinases in Regulating Kinase Activity in Arabidopsis thaliana and Brassica oleracea. DOI: 10.3390/molecules23010236 ; PMID: 29361797
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. DOI: 10.1104/pp.107.110908 ; PMID: 18192438
- Arabidopsis NRP1 and NRP2 encode histone chaperones and are required for maintaining postembryonic root growth. DOI: 10.1105/tpc.106.046490 ; PMID: 17122067
- AtEAU1 and AtEAU2, Two EAR Motif-Containing ABA Up-Regulated Novel Transcription Repressors Regulate ABA Response in Arabidopsis. DOI: 10.3390/ijms23169053 ; PMID: 36012319
Gene Resources
- UniProt: A0A178WMR3
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WMR3
- EnsemblPlants: AT1G03900.1
- Gramene: AT1G03900.1
- KEGG: ath:AT1G03900
- Orthologous matrix: NEGHRAQ
- ExpressionAtlas: AT1G03900
- InterPro: IPR011993, IPR012466
- PANTHER: PTHR12847, PTHR12847:SF3
- SUPFAM: SSF50729
- Gene3D: 2.30.29.30
- OrthoDB: A0A178WMR3
- SWISS-MODEL: A0A178WMR3
- Conserved Domain Database: cd13228
Sequences
cDNA Sequence
- >AT1G03900.1
ATATTAAATTAAAATCATTGAAAGGATAATGATAACACTAATAAAAAAAAGAAGAAGAAGGTTACGGTCTCGTAAAGCTTTCAAAAGTCCGCAACGATCACACACGTCTTTCTCCGAAACTCGTCTGAGAGAGGCTCTGAGATTCGATGTCGTTCGAGGAAGAAGAAGAGGAGGAAACATTCGAGCATACACTTCTCGTGGTGCGTGAGGTCTCCGTTTACAAGATCCCGCCGCGAACCACATCCGGCGGATACAAGTGCGGCGAATGGCTTCAATCCGATAAGATCTGGTCTGGTAGACTCCGCGTCGTATCGTGCAAGGATCGATGCGAGATCCGCCTCGAGGATTCGAATTCCGGTGATCTTTTCGCAGCTTGTTTTGTGGATCCTGGACGTAGAGAGAACTCTGTAGAGCCGTCTCTCGATTCGTCTAGGTATTTCGTTCTCAGGATCGATGACGGGAGAGGGAAGTATGCGTTTATCGGGCTAGGATTCGCTGAGAGGAACGAAGCGTTTGATTTCAATGTTGCGTTATCGGATCATGAAAAGTACGTTAGGAGGGAGAAAGAGAAGGAGACAGGGGAAACGAGTGAGAGCGATAATCATATTGATATCCATCCTGCCGTTAATCACAGATTGAAGGAAGGTGAAACCATAAGAATCAACGTGAAGCCGAAACCAACAACAAATGGCACTGGGATGCTCTCAGCTGCTCTTTCAGGAACGGGGAAGCCAAAACCTCTAGCACTTGCCCCACCCCCCAAAGCTGCCGGAGTAACCAGGTCTCCTTTACCTCCTCCTCCAAACGATCCCGTCGCTTCAAGGATTGCATCTGATGGCTGCAAGGAATCACGCAGGAACGAGCCTCTATCTGATCTATCTCAGCTCAAGAAAAATCTTCCTTCAACGGCGGGATCAGGATCGAGCAAGTCAACAGGAGCTGCATCAGGTTGGGCAGCTTTCTGATGAATGGAGTGTAAAATTTAAGTTATTGGACAAGTCCGGCTTCATCTTCTTGTGACTTGAGAGCACGAGACAATAGACAACAATGGTGGTCAGCCAACAGTCTTTTTGATGTATGTTAATGGTAAGTTGATGTGTGTTTCTTTGTAATCCTCCCACACTCCCTGTTTTAATTATTTTTCTTCCTTATAATCATCGTTGTTACATTATCGATTATCATTTGTATCACTGAGATATTAATATATACAAAAAGGCTTTTTCATAATTTCAACTTTTG
CDS Sequence
- >AT1G03900.1
ATGTCGTTCGAGGAAGAAGAAGAGGAGGAAACATTCGAGCATACACTTCTCGTGGTGCGTGAGGTCTCCGTTTACAAGATCCCGCCGCGAACCACATCCGGCGGATACAAGTGCGGCGAATGGCTTCAATCCGATAAGATCTGGTCTGGTAGACTCCGCGTCGTATCGTGCAAGGATCGATGCGAGATCCGCCTCGAGGATTCGAATTCCGGTGATCTTTTCGCAGCTTGTTTTGTGGATCCTGGACGTAGAGAGAACTCTGTAGAGCCGTCTCTCGATTCGTCTAGGTATTTCGTTCTCAGGATCGATGACGGGAGAGGGAAGTATGCGTTTATCGGGCTAGGATTCGCTGAGAGGAACGAAGCGTTTGATTTCAATGTTGCGTTATCGGATCATGAAAAGTACGTTAGGAGGGAGAAAGAGAAGGAGACAGGGGAAACGAGTGAGAGCGATAATCATATTGATATCCATCCTGCCGTTAATCACAGATTGAAGGAAGGTGAAACCATAAGAATCAACGTGAAGCCGAAACCAACAACAAATGGCACTGGGATGCTCTCAGCTGCTCTTTCAGGAACGGGGAAGCCAAAACCTCTAGCACTTGCCCCACCCCCCAAAGCTGCCGGAGTAACCAGGTCTCCTTTACCTCCTCCTCCAAACGATCCCGTCGCTTCAAGGATTGCATCTGATGGCTGCAAGGAATCACGCAGGAACGAGCCTCTATCTGATCTATCTCAGCTCAAGAAAAATCTTCCTTCAACGGCGGGATCAGGATCGAGCAAGTCAACAGGAGCTGCATCAGGTTGGGCAGCTTTCTGA
Protein Sequence
- >AT1G03900.1
MSFEEEEEEETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDSNSGDLFAACFVDPGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERNEAFDFNVALSDHEKYVRREKEKETGETSESDNHIDIHPAVNHRLKEGETIRINVKPKPTTNGTGMLSAALSGTGKPKPLALAPPPKAAGVTRSPLPPPPNDPVASRIASDGCKESRRNEPLSDLSQLKKNLPSTAGSGSSKSTGAASGWAAF