Information report for AT1G03850
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis. DOI: 10.1104/pp.106.078717 ; PMID: 16603662
- The absence of ALTERNATIVE OXIDASE1a in Arabidopsis results in acute sensitivity to combined light and drought stress. DOI: 10.1104/pp.107.115121 ; PMID: 18424626
- A subcellular localization compendium of hydrogen peroxide-induced proteins. DOI: 10.1111/j.1365-3040.2011.02323.x ; PMID: 21443605
- CYSTM, a Novel Non-Secreted Cysteine-Rich Peptide Family, Involved in Environmental Stresses in Arabidopsis thaliana. DOI: 10.1093/pcp/pcx202 ; PMID: 29272523
- Arabidopsis cysteine-rich trans-membrane module (CYSTM) small proteins play a protective role mainly against heat and UV stresses. DOI: 10.1071/FP19236 ; PMID: 32007127
- A family of pathogen-induced cysteine-rich transmembrane proteins is involved in plant disease resistance. DOI: 10.1007/s00425-021-03606-3 ; PMID: 33856567
- Arabidopsis Kunitz Trypsin Inhibitors in Defense Against Spider Mites. DOI: 10.3389/fpls.2018.00986 ; PMID: 30042779
- KMS1 and KMS2, two plant endoplasmic reticulum proteins involved in the early secretory pathway. DOI: 10.1111/j.1365-313X.2011.04522.x ; PMID: 21294794
- Chromatin-mediated feed-forward auxin biosynthesis in floral meristem determinacy. DOI: 10.1038/s41467-018-07763-0 ; PMID: 30538233
- dMi-2, a hunchback-interacting protein that functions in polycomb repression. DOI: 10.1126/science.282.5395.1897 ; PMID: 9836641
- The association among gene expression responses to nine abiotic stress treatments in Arabidopsis thaliana. DOI: 10.1534/genetics.106.061374 ; PMID: 17028338
- A novel coiled-coil protein co-localizes and interacts with a calcium-dependent protein kinase in the common ice plant during low-humidity stress. DOI: 10.1007/s00425-006-0330-0 ; PMID: 16773372
- Arabidopsis RPD3-like histone deacetylases form multiple complexes involved in stress response. DOI: 10.1016/j.jgg.2021.04.004 ; PMID: 34144927
- A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins. DOI: 10.1073/pnas.0501181102 ; PMID: 15781858
- Arabidopsis ovate family proteins, a novel transcriptional repressor family, control multiple aspects of plant growth and development. DOI: 10.1371/journal.pone.0023896 ; PMID: 21886836
- Overview of OVATE FAMILY PROTEINS, A Novel Class of Plant-Specific Growth Regulators. DOI: 10.3389/fpls.2016.00417 ; PMID: 27065353
- Genome-wide identification of genes expressed in Arabidopsis pistils specifically along the path of pollen tube growth. DOI: 10.1104/pp.105.060558 ; PMID: 15894741
- Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants. DOI: 10.1111/j.1365-313X.2007.03136.x ; PMID: 17565583
- SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis. DOI: 10.1093/emboj/20.8.2069 ; PMID: 11296239
- an RNA helicase involved in RNA silencing in Arabidopsis. DOI: 10.1016/s1360-1385(01)02040-4 ; PMID: 11495769
- Genome-wide computational identification of WG/GW Argonaute-binding proteins in Arabidopsis. DOI: 10.1093/nar/gkq162 ; PMID: 20338883
- The conserved RNA trafficking proteins HPR1 and TEX1 are involved in the production of endogenous and exogenous small interfering RNA in Arabidopsis. DOI: 10.1105/tpc.110.076638 ; PMID: 20798330
- The ERI-6/7 helicase acts at the first stage of an siRNA amplification pathway that targets recent gene duplications. DOI: 10.1371/journal.pgen.1002369 ; PMID: 22102828
- Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions. DOI: 10.1016/j.molcel.2012.07.028 ; PMID: 22940249
- The RNA Export Factor ALY1 Enables Genome-Wide RNA-Directed DNA Methylation. DOI: 10.1105/tpc.18.00624 ; PMID: 30814259
- An ubiquitin-like protein SDE2 negatively affects sucrose-induced anthocyanin biosynthesis in Arabidopsis. DOI: 10.1016/j.scib.2017.11.014 ; PMID: 36659476
- Genetic regulation of vascular tissue patterning in Arabidopsis. DOI: 10.1105/tpc.11.11.2123 ; PMID: 10559439
- Cotyledon vascular pattern2-mediated inositol (1,4,5) triphosphate signal transduction is essential for closed venation patterns of Arabidopsis foliar organs. DOI: 10.1105/tpc.021030 ; PMID: 15100402
- FRAGILE FIBER3, an Arabidopsis gene encoding a type II inositol polyphosphate 5-phosphatase, is required for secondary wall synthesis and actin organization in fiber cells. DOI: 10.1105/tpc.104.027466 ; PMID: 15539468
- The HVE/CAND1 gene is required for the early patterning of leaf venation in Arabidopsis. DOI: 10.1242/dev.02554 ; PMID: 16943276
Gene Resources
- UniProt: A0A1P8AQF1
- EMBL: CP002684
- AlphaFoldDB: A0A1P8AQF1
- EnsemblPlants: AT1G03850.3
- Gramene: AT1G03850.3
- ExpressionAtlas: AT1G03850
- InterPro: IPR011905
- PANTHER: PTHR10168
- Gene3D: 3.40.30.10
- SWISS-MODEL: A0A1P8AQF1
Homologs
- Lactuca sativa gene-LSAT_0X3441
- Oryza sativa PHS9
Sequences
cDNA Sequence
- >AT1G03850.3
CATAAGTTTAGTTATAGATCTTTATTTTGGATACGGTGACATGGCTTCGGATATCAAGAGAATACAGTTTACACATGCTTCATTGACCCCCAAAGCCAAATGCTCTCCAAAATCCTCTATATAAATTCTTTAATAATCACATCTCTTACCAAACGAACCCAACTACACAAGTCTCTCTCTCTTTTCCCATTTCTCCCTCTCTCTCTTTGTCTCTCTATCATCAATTATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAAGAGAATGCTTTCCTCCGCTCAAATCTTACGGATAGGTTCTGAGATGAAGAACGAAGTTGTTTCAGAGATAATTTAGTAATGGATCATCATCGGAGATCTTAAAATTCGTAGATAAAATATGGATTTATTTTTTGTCGTTTAGAAGAAGAAGAATAGCAAATTTTCGAGTATTTCCTTTTTTCCGACTAGGTTACGAAAAAGGAAATTTCATTAATTATGCTAAAAACAAAAAAATATGGAAATTTTCTCACAACGGTCATATTTGTTGAAACAGAGAATGTGCCGTTGAGATCGAGAGGAGAAATTCGGGATCATGTGAGCTCTTTTCAACCGACAAGATCCTGCAACCAATAAGATCTCTACCGATTTTTGTAGTTGCTTATCTTTGGTTACTTTGGTCAAAACACAATCACAAACTCGTTAGATACAAAACTGTTCAGAAAAAACTTTCACTCTGATACCATGTCAAATTCACGCA - >AT1G03850.2
CATAAGTTTAGTTATAGATCTTTATTTTGGATACGGTGACATGGCTTCGGATATCAAGAGAATACAGTTTACACATGCTTCATTGACCCCCAAAGCCAAATGCTCTCCAAAATCCTCTATATAAATTCTTTAATAATCACATCTCTTACCAAACGAACCCAACTACACAAGTCTCTCTCTCTTTTCCCATTTCTCCCTCTCTCTCTTTGTCTCTCTATCATCAATTATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAAGAGAATGCTTTCCTCCGCTCAAATCTTACGGATAGGTTCTGAGATGAAGAACGAAGTTGTTTCAGAGATAATTTAGTAATGGATCATCATCGGAGATCTTAAAATTCGTAGATAAAATATGGATTTATTTTTTGTCGTTTAGAAGAAGAAGAATAGCAAATTTTCGAGTATTTCCTTTTTTCCGACTAGGTTACGAAAAAGGAAATTTCATTAATTATGCTAAAAACAAAAAAATATGGAAATTTTCTCACAACGGTCATATTTGTTGAAACAGAGAATGTGCCGTTGAGATCGAGAGGAGAAATTCGGGATCATGTGAGCTCTTTTCAACCGACAAGATCCTGCAACCAATAAGATCTCTACCGATTTTTGTAGTTGCTTATCTTTGGTTACTTTGGTCAAAACACAATCACAAACTCGTTAGATACAAAACTGTTCAGAAAAAACTTTCACTCTGATACCATGTCAAATTCACGCA - >AT1G03850.1
CATAAGTTTAGTTATAGATCTTTATTTTGGATACGGTGACATGGCTTCGGATATCAAGAGAATACAGTTTACACATGCTTCATTGACCCCCAAAGCCAAATGCTCTCCAAAATCCTCTATATAAATTCTTTAATAATCACATCTCTTACCAAACGAACCCAACTACACAAGTCTCTCTCTCTTTTCCCATTTCTCCCTCTCTCTCTTTGTCTCTCTATCATCAATTATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAAGAGAATGCTTTCCTCCGCTCAAATCTTACGGATAGGTTCTGAGATGAAGAACGAAGTTGTTTCAGAGATAATTTAGTAATGGATCATCATCGGAGATCTTAAAATTCGTAGATAAAATATGGATTTATTTTTTGTCGTTTAGAAGAAGAAGAATAGCAAATTTTCGAGTATTTCCTTTTTTCCGACTAGGTTACGAAAAAGGAAATTTCATTAATTATGCTAAAAACAAAAAAATATGGAAATTTTCTCACAACGGTCATATTTGTTGAAACAGAGAATGTGCCGTTGAGATCGAGAGGAGAAATTCGGGATCATGTGAGCTCTTTTCAACCGACAAGATCCTGCAACCAATAAGATCTCTACCGATTTTTGTAGTTGCTTATCTTTGGTTACTTTGGTCAAAACACAATCACAAACTCGTTAGATACAAAACTGTTCAGAAAAAACTTTCACTCTGATACCATGTCAAATTCACGCA
CDS Sequence
- >AT1G03850.3
ATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAA - >AT1G03850.2
ATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAA - >AT1G03850.1
ATGCAAAAAGCAATTCGACCATACGAGTCACCGTGGACGAAGACCGTGCCGGGCAATAGCATTTTCCTTTTAAAGAATGAAGATAAACCATCATCATCATCATCATCATTATCATGGTTAACATCAGGATCACCAAAGCCAACATCTATAAGCAATAAGAGATCAAGCAACCTAGTTGTGATGGAGAATGCTGTGGTGGTGTTTGCAAGGAGAGGCTGTTGTTTGGGACACGTGGCAAAACGGCTGCTACTGACACATGGCGTGAATCCAGTGGTGGTTGAGATTGGTGAAGAAGACAACAACAACTACGACAATATCGCCACTCCATCAAGATTCGAACCGATACATGGTCGTCGTTCTCAGTCGCCACCGTCGACCGAATCCGCTGGTGAGAATAGCGTAAGAAGCATCCACGGTAACGAATCAACAAGAAGGGTTAAATTAGAAGAGACCATAACTAAATCACGATAA
Protein Sequence
- >AT1G03850.3
MQKAIRPYESPWTKTVPGNSIFLLKNEDKPSSSSSSLSWLTSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIATPSRFEPIHGRRSQSPPSTESAGENSVRSIHGNESTRRVKLEETITKSR - >AT1G03850.2
MQKAIRPYESPWTKTVPGNSIFLLKNEDKPSSSSSSLSWLTSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIATPSRFEPIHGRRSQSPPSTESAGENSVRSIHGNESTRRVKLEETITKSR - >AT1G03850.1
MQKAIRPYESPWTKTVPGNSIFLLKNEDKPSSSSSSLSWLTSGSPKPTSISNKRSSNLVVMENAVVVFARRGCCLGHVAKRLLLTHGVNPVVVEIGEEDNNNYDNIATPSRFEPIHGRRSQSPPSTESAGENSVRSIHGNESTRRVKLEETITKSR