Gene Details:

• Gene ID: AT1G03840
• Gene Symbol: IDD3, MGP
• Gene Name: INDETERMINATE DOMAIN 3, Magpie
• Description: C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G03840.1     AT1G03840.2

Plant Ontology Annotations:

• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0000039  — shoot axis vascular system — sistema vascular del eje del epiblasto (epiblastema) (Spanish, exact), シュート軸維管系 (Japanese, exact), branch vascular system (narrow), stem vascular system (narrow)
• PO:0000045  — embryo root — embryonic root (exact), raíz embriónica (Spanish, exact), 初期の根、胚根 (Japanese, exact)
• PO:0006081  — primary root apical meristem — meristema apical de la raíz primaria (Spanish, exact), 一次根頂端分裂組織 (Japanese, exact), apical meristem of primary root (related), embryonic root meristem (related)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0000060  — root cortex-endodermis initial cell — célula inicial del cortex/endodermis de la raíz (Spanish, exact), root cortex-endodermis initial (exact), root cortex-endodermis stem cell (exact), 根皮層内皮始原細胞 (Japanese, exact)
• PO:0020124  — root stele — estela de la raíz (Spanish, exact), 根中心柱 (Japanese, exact), root vascular cylinder (related)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Function-related keywords:

• carpel ,  shoot axis vascular system ,  embryo root ,  primary root apical meristem ,  plant embryo ,  root cortex-endodermis initial cell ,  root stele ,  plant sperm cell

Literature:

• TraB family proteins are components of ER-mitochondrial contact sites and regulate ER-mitochondrial interactions and mitophagy.   DOI:  10.1038/s41467-022-33402-w ;  PMID:  36163196
• TraB, a novel plant ER-mitochondrial contact site protein functions as a mitophagy receptor in plants.   DOI:  10.1080/15548627.2022.2151190 ;  PMID:  36420795
• A member of the CONSTANS-Like protein family is a putative regulator of reactive oxygen species homeostasis and spaceflight physiological adaptation.   DOI:  10.1093/aobpla/ply075 ;  PMID:  30705745
• Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis.   DOI:  10.1074/jbc.M309338200 ;  PMID:  13129917
• Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors.   DOI:  10.1046/j.1365-313x.2003.01960.x ;  PMID:  14690510
• Gene expression signatures from three genetically separable resistance gene signaling pathways for downy mildew resistance.   DOI:  10.1104/pp.104.040444 ;  PMID:  15181204
• Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila.   DOI:  10.1186/1471-2229-8-115 ;  PMID:  19014467
• MTP1-dependent Zn sequestration into shoot vacuoles suggests dual roles in Zn tolerance and accumulation in Zn-hyperaccumulating plants.   DOI:  10.1111/j.1365-313X.2008.03754.x ;  PMID:  19054361
• Arabidopsis and rice showed a distinct pattern in ZIPs genes expression profile in response to Cd stress.   DOI:  10.1186/s40529-018-0238-6 ;  PMID:  30255457
• The R2R3-MYB Transcription Factor MYB49 Regulates Cadmium Accumulation.   DOI:  10.1104/pp.18.01380 ;  PMID:  30782964
• Iron Availability within the Leaf Vasculature Determines the Magnitude of Iron Deficiency Responses in Source and Sink Tissues in Arabidopsis.   DOI:  10.1093/pcp/pcac046 ;  PMID:  35388430
• Transcriptional regulation of secondary growth in Arabidopsis thaliana.   DOI:  10.1093/jxb/erg304 ;  PMID:  14585825
• Arabidopsis Endoplasmic Reticulum-Localized UBAC2 Proteins Interact with PAMP-INDUCED COILED-COIL to Regulate Pathogen-Induced Callose Deposition and Plant Immunity.   DOI:  10.1105/tpc.18.00334 ;  PMID:  30606781
• Identification and characterization of aluminum tolerance loci in Arabidopsis (Landsberg erecta x Columbia) by quantitative trait locus mapping. A physiologically simple but genetically complex trait.   DOI:  10.1104/pp.103.023085 ;  PMID:  12805622
• PCC1: a merging point for pathogen defence and circadian signalling in Arabidopsis.   DOI:  10.1007/s00425-003-1143-z ;  PMID:  14614626
• Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2004.02090.x ;  PMID:  15144383
• Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2004.02105.x ;  PMID:  15200641
• Dynamic histone acetylation of late embryonic genes during seed germination.   DOI:  10.1007/s11103-005-2081-x ;  PMID:  16307366

Sequences: