Information report for AT1G03475
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0015995 — involved in — chlorophyll biosynthetic process
- GO:0009570 — located in — chloroplast stroma
- GO:0048046 — located in — apoplast
- GO:0006782 — involved in — protoporphyrinogen IX biosynthetic process
- GO:0005576 — located in — extracellular region
- GO:0004109 — enables — coproporphyrinogen oxidase activity
- GO:0033014 — acts upstream of or within — tetrapyrrole biosynthetic process
- GO:0009536 — located in — plastid
- GO:0042803 — enables — protein homodimerization activity
- GO:0005737 — is active in — cytoplasm
- GO:0009507 — located in — chloroplast
- lin2 — Plant have pale green leaves and develop lesions on the young leaves. Lesions begin as a small spot or stripe of collapsed tissue usually appearing in the middle part of the young leaves.
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- UBIQUITIN-SPECIFIC PROTEASES function in plant development and stress responses. DOI: 10.1007/s11103-017-0633-5 ; PMID: 28695315
- Automated identification of putative methyltransferases from genomic open reading frames. DOI: 10.1074/mcp.M300037-MCP200 ; PMID: 12872006
- Regulation of flowering time by the protein arginine methyltransferase AtPRMT10. DOI: 10.1038/sj.embor.7401111 ; PMID: 18007657
- Redundant requirement for a pair of PROTEIN ARGININE METHYLTRANSFERASE4 homologs for the proper regulation of Arabidopsis flowering time. DOI: 10.1104/pp.108.124727 ; PMID: 18660432
- Crystal structure of the plant epigenetic protein arginine methyltransferase 10. DOI: 10.1016/j.jmb.2011.09.040 ; PMID: 21986201
- The enzymatic activity of Arabidopsis protein arginine methyltransferase 10 is essential for flowering time regulation. DOI: 10.1007/s13238-012-2935-3 ; PMID: 22729397
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- The ARID-HMG DNA-binding protein AtHMGB15 is required for pollen tube growth in Arabidopsis thaliana. DOI: 10.1111/tpj.12582 ; PMID: 24923357
- Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. DOI: 10.1105/tpc.17.00805 ; PMID: 29317470
- Myosin-driven transport network in plants. DOI: 10.1073/pnas.1620577114 ; PMID: 28096376
- The pleiotropic Arabidopsis frd mutation with altered coordination of chloroplast biogenesis, cell size and differentiation, organ size and number. DOI: 10.1016/j.gene.2006.06.019 ; PMID: 16973304
- Identification of putative rhamnogalacturonan-II specific glycosyltransferases in Arabidopsis using a combination of bioinformatics approaches. DOI: 10.1371/journal.pone.0051129 ; PMID: 23272088
- Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites. DOI: 10.1002/rcm.1093 ; PMID: 12845583
- An integrated strategy for identification and relative quantification of site-specific protein phosphorylation using liquid chromatography coupled to MS2/MS3. DOI: 10.1002/rcm.2236 ; PMID: 16287031
- A spatiotemporal analysis of enzymatic activities associated with carbon metabolism in wild-type and mutant embryos of Arabidopsis using in situ histochemistry. DOI: 10.1111/j.1365-313X.2006.02682.x ; PMID: 16553903
- Phylogenetic and expression analysis of sucrose phosphate synthase isozymes in plants. DOI: 10.1016/j.jplph.2006.04.014 ; PMID: 16876912
- CELLULOSE SYNTHASE9 serves a nonredundant role in secondary cell wall synthesis in Arabidopsis epidermal testa cells. DOI: 10.1104/pp.110.154062 ; PMID: 20335403
- Decrease in leaf sucrose synthesis leads to increased leaf starch turnover and decreased RuBP regeneration-limited photosynthesis but not Rubisco-limited photosynthesis in Arabidopsis null mutants of SPSA1. DOI: 10.1111/j.1365-3040.2010.02265.x ; PMID: 21309792
- Loss of the two major leaf isoforms of sucrose-phosphate synthase in Arabidopsis thaliana limits sucrose synthesis and nocturnal starch degradation but does not alter carbon partitioning during photosynthesis. DOI: 10.1093/jxb/eru282 ; PMID: 24994761
Gene Resources
- UniProt: A0A178WIW9
- EMBL: CACRSJ010000104, CACSHJ010000087, LUHQ01000001
- AlphaFoldDB: A0A178WIW9
- EnsemblPlants: AT1G03475.1
- Gramene: AT1G03475.1
- KEGG: ath:AT1G03475
- Orthologous matrix: VHANWRY
- ExpressionAtlas: AT1G03475
- InterPro: IPR001260, IPR018375, IPR036406
- PANTHER: PTHR10755, PTHR10755:SF0
- SUPFAM: SSF102886
- PROSITE: PS01021
- Gene3D: 3.40.1500.10
- OrthoDB: A0A178WIW9
- SWISS-MODEL: A0A178WIW9
Homologs
- Musa acuminata GSMUA_Achr11P25600_001
- Oryza sativa RLIN1
Sequences
cDNA Sequence
- >AT1G03475.1
TTTTCTTTTACCTTGAGCTGTTAAATAAAAAGGAAGAGCGGTCAAAATCAGTGGACGACGAAGACTTCTTATCATTTAATATCTCTCCATCATCATCTTCTTCTTCAGCATCAAATCCAAATTCGGATCAAACATGGCTTCTCACTCGTCGACTCTCCTCTCTTCTCCTACTTTCGCTCCTTTCTCCTCTCATCGTCTTCATTATTCTCCCAATCCCTCTACTCTCAGATTCTCCCGTCCAATCAGAAATAAACCTAATCTCGCCTTGCGATGTTCAGTCTCAATTGAGAAAGAAGTTCCCGAAACTGAACGACCCTTTACTTTCCTTAGGGATTCTGATGACGTCACTCCATCTTCTTCTTCTTCTTCCGTCAGGGCTCGTTTCGAGACTATGATTAGGGCTGCTCAAGACAGTGTTTGTGATGCAATTGAAGCTATAGAAGGCGGTCCTAAGTTTAAAGAAGATGTTTGGTCTCGACCTGGTGGTGGCGGTGGAATCAGTCGTGTGTTGCAGGACGGGAATGTCTTTGAGAAAGCTGGTGTTAATGTCTCTGTGGTTTATGGTGTTATGCCTCCTGAAGCTTATAGAGCTGCAAAGGGCTCAGCTTCTGATCAGAAACCTGGTCCTGTTCCGTTCTTCGCTGCTGGAGTCAGCTCGGTTTTGCATCCCAAGAACCCTTTTGCCCCAACCCTGCATTTCAATTATCGCTATTTCGAGACAGATGCTCCAAAGGATGTTCCTGGAGCTCCAAGGCAATGGTGGTTTGGTGGTGGCACTGATTTCACTCCTGCTTACATCTTTGAAGAAGATGTCAAGCATTTCCATTCGATTCAAAAGCAAGCCTGTGACAAATTTGACCCTTCCTTCTATCCCCGATTCAAGAAGTGGTGTGATGACTACTTTTACATCAAGCACCGTGATGAGAGACGAGGACTTGGAGGGATATTTTTTGATGATCTTAATGACTATGATCAGGAAATGCTTCTGTCATTTGCCACTGAATGCGCAAACTCAGTGGTGCCGGCTTATATACCTATAGTAGAGAAAAGGAAAGACATGGAATTTACAGAGCAGCACAAGGCATGGCAACAGTTGCGACGAGGGCGATATGTCGAATTCAACTTGGTATATGATCGGGGAACGACATTTGGTCTGAAGACAGGAGGACGAATAGAGAGCATTCTCGTCTCTCTTCCGCTTTCAGCAAGATGGGAATATGACCATAAACCGGAAGAGGGGACCGAAGAGTGGAAGCTATTGGATGCTTGCATCAACCCGAAGGAGTGGATCTAGCCTGTGTTTCCCATTGTTGTGAGAAGAGTGAGTTTATTTCCATTGTTTCATGTAAGTTTTGAGCAGCTTTAGAGGATTAGATAACTGGAGAGATGGAGAAAGAGAGTGTGTAAGGTCAGGTCAAAATCTAGTCTTGTGATGTGCATGTTAACATCATCTCCTTTCTCTCTTTGCGATGGCAATGAAGACAAACTAAGAGCAGTGTTGTTAAAAGTCAAAACTTACCAATGCAAACAGTTGGTTTCTTGCAAGTTTTGAGCAGCTTTAGAGGATTAGATTACTGAAAAGAAAGTTATACTCTAGCCTTGTGATGTGCATGTTAACATGCGTCTGTTACGCTGTCGTTTCGTTTCTTTCTTTTGCCAATGGCAACGAAGACAACTTGTGCATTCAACTTTTTCACAAGTGACATGCTTATCTACGGACTCTAATCCAAATCCATATCCTCC
CDS Sequence
- >AT1G03475.1
ATGGCTTCTCACTCGTCGACTCTCCTCTCTTCTCCTACTTTCGCTCCTTTCTCCTCTCATCGTCTTCATTATTCTCCCAATCCCTCTACTCTCAGATTCTCCCGTCCAATCAGAAATAAACCTAATCTCGCCTTGCGATGTTCAGTCTCAATTGAGAAAGAAGTTCCCGAAACTGAACGACCCTTTACTTTCCTTAGGGATTCTGATGACGTCACTCCATCTTCTTCTTCTTCTTCCGTCAGGGCTCGTTTCGAGACTATGATTAGGGCTGCTCAAGACAGTGTTTGTGATGCAATTGAAGCTATAGAAGGCGGTCCTAAGTTTAAAGAAGATGTTTGGTCTCGACCTGGTGGTGGCGGTGGAATCAGTCGTGTGTTGCAGGACGGGAATGTCTTTGAGAAAGCTGGTGTTAATGTCTCTGTGGTTTATGGTGTTATGCCTCCTGAAGCTTATAGAGCTGCAAAGGGCTCAGCTTCTGATCAGAAACCTGGTCCTGTTCCGTTCTTCGCTGCTGGAGTCAGCTCGGTTTTGCATCCCAAGAACCCTTTTGCCCCAACCCTGCATTTCAATTATCGCTATTTCGAGACAGATGCTCCAAAGGATGTTCCTGGAGCTCCAAGGCAATGGTGGTTTGGTGGTGGCACTGATTTCACTCCTGCTTACATCTTTGAAGAAGATGTCAAGCATTTCCATTCGATTCAAAAGCAAGCCTGTGACAAATTTGACCCTTCCTTCTATCCCCGATTCAAGAAGTGGTGTGATGACTACTTTTACATCAAGCACCGTGATGAGAGACGAGGACTTGGAGGGATATTTTTTGATGATCTTAATGACTATGATCAGGAAATGCTTCTGTCATTTGCCACTGAATGCGCAAACTCAGTGGTGCCGGCTTATATACCTATAGTAGAGAAAAGGAAAGACATGGAATTTACAGAGCAGCACAAGGCATGGCAACAGTTGCGACGAGGGCGATATGTCGAATTCAACTTGGTATATGATCGGGGAACGACATTTGGTCTGAAGACAGGAGGACGAATAGAGAGCATTCTCGTCTCTCTTCCGCTTTCAGCAAGATGGGAATATGACCATAAACCGGAAGAGGGGACCGAAGAGTGGAAGCTATTGGATGCTTGCATCAACCCGAAGGAGTGGATCTAG
Protein Sequence
- >AT1G03475.1
MASHSSTLLSSPTFAPFSSHRLHYSPNPSTLRFSRPIRNKPNLALRCSVSIEKEVPETERPFTFLRDSDDVTPSSSSSSVRARFETMIRAAQDSVCDAIEAIEGGPKFKEDVWSRPGGGGGISRVLQDGNVFEKAGVNVSVVYGVMPPEAYRAAKGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSFATECANSVVPAYIPIVEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLSARWEYDHKPEEGTEEWKLLDACINPKEWI