Information report for AT1G03360
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0034427 — involved in — nuclear-transcribed mRNA catabolic process, exonucleolytic, 3-5
- GO:0000177 — part of — cytoplasmic exosome (RNase complex)
- GO:0071035 — involved in — nuclear polyadenylation-dependent rRNA catabolic process
- GO:0000460 — acts upstream of or within — maturation of 5.8S rRNA
- GO:0034475 — involved in — exonucleolytic trimming to generate mature 3-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
- GO:0005654 — located in — nucleoplasm
- GO:0071038 — involved in — nuclear polyadenylation-dependent tRNA catabolic process
- GO:0000467 — involved in — polyadenylation-dependent snoRNA 3-end processing
- GO:0071034 — involved in — CUT catabolic process
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , guard cell
Literature and News
- Conservation of two lineages of peroxisomal (Type I) 3-ketoacyl-CoA thiolases in land plants, specialization of the genes in Brassicaceae, and characterization of their expression in Arabidopsis thaliana. DOI: 10.1093/jxb/ers260 ; PMID: 23066143
- Timely expression of the Arabidopsis stoma-fate master regulator MUTE is required for specification of other epidermal cell types. DOI: 10.1111/tpj.12244 ; PMID: 23662679
- Knockout of the two evolutionarily conserved peroxisomal 3-ketoacyl-CoA thiolases in Arabidopsis recapitulates the abnormal inflorescence meristem 1 phenotype. DOI: 10.1093/jxb/eru397 ; PMID: 25297549
- Reconstitution of Abscisic Acid Signaling from the Receptor to DNA via bHLH Transcription Factors. DOI: 10.1104/pp.16.01825 ; PMID: 28438792
- The endophytic fungus Piriformospora indica enhances Arabidopsis thaliana growth and modulates Na(+)/K(+) homeostasis under salt stress conditions. DOI: 10.1016/j.plantsci.2017.07.006 ; PMID: 28818365
- The Calmodulin-Binding Protein IQM1 Interacts with CATALASE2 to Affect Pathogen Defense. DOI: 10.1104/pp.19.01060 ; PMID: 31548265
Gene Resources
- UniProt: A0A178W3N1
- EMBL: CACRSJ010000104, LUHQ01000001
- AlphaFoldDB: A0A178W3N1
- EnsemblPlants: AT1G03360.1
- Gramene: AT1G03360.1
- KEGG: ath:AT1G03360
- Orthologous matrix: MNMPDGV
- ExpressionAtlas: AT1G03360
- InterPro: IPR003029, IPR004088, IPR012340
- PANTHER: PTHR21321, PTHR21321:SF4
- SUPFAM: SSF110324, SSF50249, SSF54791
- Gene3D: 2.40.50.100, 2.40.50.140
- SWISS-MODEL: A0A178W3N1
- Conserved Domain Database: cd05789, cd22525
Sequences
cDNA Sequence
- >AT1G03360.1
CAAAACCCTAGAATTCATTCAAGGGAACTAACGTCAAGGTTTTTGCTCTTCTTCTCTCCCAAGTCCCAAACTCGTTTTGCATCGCCATTGTTGTGTTGCTGGAGCTAAATAGAGAGAAAGAGAGAGAGTGTCTGTGATGGTGATGAGAAAGCTACAGTTACCGTTGAGCCAGACGCAGAAGGTTAGGTTTGAGAGAGCAATCGAGCGGCTTCAATCACTGTCGTCGTCGGCTAACTCTGACGCTTCTGTTATCGTCACCGACTCTATTCCCGTCAACCATGACGATGCCTTCCTCAAGGGACATGGAACTTCCGAGGTCGATGGTGAGTTGCTCGCGACGGTCTGTGGAGTAGTGGAGCGTGTGGATAAGCTTGTCTATGTACGCACCTTGCGAGCCAGGTACAAGCCTGAAGTTGGGGATATTGTGGTAGGCCGTGTCATTGAGGTTGCTCAAAAACGTTGGAGAGTGGAGCTCAACTTCAATCAGGATGGAGTACTGATGCTTTCTTCCATGAACATGCCTGATGGTATTCAGAGGCGAAGAACCTCTGTGGATGAACTCAATATGCGGAATATCTTTGTAGAGCATGATGTCGTATGTGCTGAAGTACGCAACTTTCAGCATGATGGTAGCTTGCAGTTACAAGCCAGAAGTCAGAAGTATGGCAAGCTCGAGAAGGGACAACTTCTGAAGGTCGATCCTTACTTGGTTAAGAGAAGCAAACATCACTTTCATTACGTAGAAAGTCTTGGGATTGATTTGATTATTGGCTGCAATGGTTTCATATGGGTTGGAGAACATGTCGAAGTGAGAGATCCTATGGCAATAGATGATCAGAAAGATGAGGAAATGATCTCATCCTCCTCCACAGGAAAAGAGCAAAGCCATATTCCACTCGAGACTCGACAAACCATATGCAGAATCGGGAATGCGATACGTGTCTTGTCTAATCTAGGCTTCACCGTGACACTAGAAGTAATCATGGAGACTGTTAACCTCAGTAACTCAAAGAATATTGACATACATGATATGCTTGGATCAGAGTTTCACGTTGTGGTAGCAGAGAATGAAGCTGAAAGAAGACGTACAAAGAGGAAAAAGTGAAAACTACCCCTTTTTGTCACTGATGTATCAGAGACTTGTAACGTGTATTAGATCATTCGGTCTTGTTTGTTACTCAGCTTCTATTGAAAGTTCGAATTTTAATCTGATTGAGATATGTAGTATGATGGATGTGTTTGATACTATTAACTGTACATCAGATTAGATTAGTCGAGTTATGTCTTTTGGAGACGGCTTTCTTCTTTCATTCATGAATTTATCG
CDS Sequence
- >AT1G03360.1
ATGGTGATGAGAAAGCTACAGTTACCGTTGAGCCAGACGCAGAAGGTTAGGTTTGAGAGAGCAATCGAGCGGCTTCAATCACTGTCGTCGTCGGCTAACTCTGACGCTTCTGTTATCGTCACCGACTCTATTCCCGTCAACCATGACGATGCCTTCCTCAAGGGACATGGAACTTCCGAGGTCGATGGTGAGTTGCTCGCGACGGTCTGTGGAGTAGTGGAGCGTGTGGATAAGCTTGTCTATGTACGCACCTTGCGAGCCAGGTACAAGCCTGAAGTTGGGGATATTGTGGTAGGCCGTGTCATTGAGGTTGCTCAAAAACGTTGGAGAGTGGAGCTCAACTTCAATCAGGATGGAGTACTGATGCTTTCTTCCATGAACATGCCTGATGGTATTCAGAGGCGAAGAACCTCTGTGGATGAACTCAATATGCGGAATATCTTTGTAGAGCATGATGTCGTATGTGCTGAAGTACGCAACTTTCAGCATGATGGTAGCTTGCAGTTACAAGCCAGAAGTCAGAAGTATGGCAAGCTCGAGAAGGGACAACTTCTGAAGGTCGATCCTTACTTGGTTAAGAGAAGCAAACATCACTTTCATTACGTAGAAAGTCTTGGGATTGATTTGATTATTGGCTGCAATGGTTTCATATGGGTTGGAGAACATGTCGAAGTGAGAGATCCTATGGCAATAGATGATCAGAAAGATGAGGAAATGATCTCATCCTCCTCCACAGGAAAAGAGCAAAGCCATATTCCACTCGAGACTCGACAAACCATATGCAGAATCGGGAATGCGATACGTGTCTTGTCTAATCTAGGCTTCACCGTGACACTAGAAGTAATCATGGAGACTGTTAACCTCAGTAACTCAAAGAATATTGACATACATGATATGCTTGGATCAGAGTTTCACGTTGTGGTAGCAGAGAATGAAGCTGAAAGAAGACGTACAAAGAGGAAAAAGTGA
Protein Sequence
- >AT1G03360.1
MVMRKLQLPLSQTQKVRFERAIERLQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVDGELLATVCGVVERVDKLVYVRTLRARYKPEVGDIVVGRVIEVAQKRWRVELNFNQDGVLMLSSMNMPDGIQRRRTSVDELNMRNIFVEHDVVCAEVRNFQHDGSLQLQARSQKYGKLEKGQLLKVDPYLVKRSKHHFHYVESLGIDLIIGCNGFIWVGEHVEVRDPMAIDDQKDEEMISSSSTGKEQSHIPLETRQTICRIGNAIRVLSNLGFTVTLEVIMETVNLSNSKNIDIHDMLGSEFHVVVAENEAERRRTKRKK