Gene Details:

  • Gene ID: AT1G03140
  • Gene Symbol: PRP18a
  • Gene Name: pre-mRNA processing factor 18a
  • Description: splicing factor Prp18 family protein;(source:Araport11)
  • TAIR Accession:
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
  • PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Germplasm Phenotype:

  • CS69984  — Low GFP protein levels relative to the wild-type T line (CS69640) due to decreased splicing of the non-canonical AT-AC intron and increased splicing of the canonical GT-AG intron in GFP pre-mRNA. Short roots and small siliques compared to CS69640.
  • CS69984  — Reduced silique length, reduced root length.

Literature:

Sequences:

cDNA Sequence
  • >AT1G03140.1
    AAATTTCATTATCTCCCGTCGTCGCGACCTTCTCAGACAACAGAACCAAATCCTCGGCGGCGATTGAAGAAACCTTTCCGATGGATCTGCTCAGGGAAGAGATTCTGAAGAAACGTAAGAGTCTAGCTGAGGAATCTGGTGGTAAGAAGTTCTTCAAGCGGTCTGAGATCGAGCAGAAGAAAATCCAGAAGCTTCGAGAGGAAGAACGACGCGAGCACGAGCTTAAGGCTCAGCGGAGAGCCGCCGCCGCCGCTTCCGGTGGAGATGGAAAATCATCCGGCTCTGCTCCTGGTTCTTCTAACGCAGCTACGTCTGCGTCTTCCAAATCCTCTGCATCGGACGCTGCTGCTATCGCCGATTCAAAAGCCCTAACCGACGAAAACCTAATTCTCCCGAGGCAGGAAGTGATTCGTCGTTTGAGATTCCTTAAGCAGCCGATGACTCTCTTCGGAGAAGATGATCAATCGCGGCTCGATCGACTCAAGTACGTTTTGAAGGAAGGATTGTTCGAGGTTGATAGTGATATGACTGAAGGACAGACGAATGATTTCTTGCGTGACATCGCAGAGCTTAAGAAGAGGCAGAAGAGTGGTATGATGGGAGATAGGAAGAGGAAGAGTAGAGATGAGAGAGGAAGAGACGAAGGTGATAGAGGTGAAACAAGGGAAGATGAACTTAGTGGTGGTGAATCGAGTGATGTTGATGCTGATAAAGATATGAAACGTTTGAAAGCTAACTTTGAGGATCTATGCGATGAGGATAAGATCCTTGTGTTTTATAAGAAGCTGTTGATTGAATGGAAACAGGAGCTTGATGCGATGGAGAACACTGAGAGGAGAACTGCAAAAGGGAAACAGATGGTAGCCACTTTTAAGCAGTGTGCTAGGTATCTAGTTCCTCTCTTCAACTTATGCAGGAAGAAGGGTTTACCAGCTGACATTCGTCAAGCTTTAATGGTGATGGTTAACCACTGCATAAAGCGAGACTACCTTGCTGCAATGGACCACTACATCAAACTAGCTATCGGGAACGCGCCATGGCCTATTGGAGTGACTATGGTTGGTATTCACGAACGTTCAGCTCGAGAGAAGATTTACACCAACAGTGTTGCTCACATCATGAACGATGAAACCACTCGCAAGTATCTTCAGTCAGTTAAAAGACTGATGACTTTCTGTCAAAGACGTTATCCAACTATGCCTTCTAAAGCCGTTGAGTTCAATAGCTTAGCCAACGGAAGCGACTTACAGTCTTTGCTAGCCGAAGAGAGATTCTTTGGTGGTAATCGTGAACAGGTCTCAGAGGAGAGACTCCGGCTCATGCCTTCTCAGAGCGAAAGCTAGTCTTACTGTGTTTTCTGCTTTGTTGTGTTTTTATTTTTGTATCAAAACGTTGACTCTGTATTATCGTCTATTTAAAACGTTGACCTGATTGTCTAGTCTTATGTGGCATGTGGGAAACATATCCAAACTCATAAAACGACATGGCCTAAAGATCTAGTAAGGGTAAGAGGAGAATCGAATCTTGGAACCTTATTGGTCCAAATGGTATGA
CDS Sequence
  • >AT1G03140.1
    ATGGATCTGCTCAGGGAAGAGATTCTGAAGAAACGTAAGAGTCTAGCTGAGGAATCTGGTGGTAAGAAGTTCTTCAAGCGGTCTGAGATCGAGCAGAAGAAAATCCAGAAGCTTCGAGAGGAAGAACGACGCGAGCACGAGCTTAAGGCTCAGCGGAGAGCCGCCGCCGCCGCTTCCGGTGGAGATGGAAAATCATCCGGCTCTGCTCCTGGTTCTTCTAACGCAGCTACGTCTGCGTCTTCCAAATCCTCTGCATCGGACGCTGCTGCTATCGCCGATTCAAAAGCCCTAACCGACGAAAACCTAATTCTCCCGAGGCAGGAAGTGATTCGTCGTTTGAGATTCCTTAAGCAGCCGATGACTCTCTTCGGAGAAGATGATCAATCGCGGCTCGATCGACTCAAGTACGTTTTGAAGGAAGGATTGTTCGAGGTTGATAGTGATATGACTGAAGGACAGACGAATGATTTCTTGCGTGACATCGCAGAGCTTAAGAAGAGGCAGAAGAGTGGTATGATGGGAGATAGGAAGAGGAAGAGTAGAGATGAGAGAGGAAGAGACGAAGGTGATAGAGGTGAAACAAGGGAAGATGAACTTAGTGGTGGTGAATCGAGTGATGTTGATGCTGATAAAGATATGAAACGTTTGAAAGCTAACTTTGAGGATCTATGCGATGAGGATAAGATCCTTGTGTTTTATAAGAAGCTGTTGATTGAATGGAAACAGGAGCTTGATGCGATGGAGAACACTGAGAGGAGAACTGCAAAAGGGAAACAGATGGTAGCCACTTTTAAGCAGTGTGCTAGGTATCTAGTTCCTCTCTTCAACTTATGCAGGAAGAAGGGTTTACCAGCTGACATTCGTCAAGCTTTAATGGTGATGGTTAACCACTGCATAAAGCGAGACTACCTTGCTGCAATGGACCACTACATCAAACTAGCTATCGGGAACGCGCCATGGCCTATTGGAGTGACTATGGTTGGTATTCACGAACGTTCAGCTCGAGAGAAGATTTACACCAACAGTGTTGCTCACATCATGAACGATGAAACCACTCGCAAGTATCTTCAGTCAGTTAAAAGACTGATGACTTTCTGTCAAAGACGTTATCCAACTATGCCTTCTAAAGCCGTTGAGTTCAATAGCTTAGCCAACGGAAGCGACTTACAGTCTTTGCTAGCCGAAGAGAGATTCTTTGGTGGTAATCGTGAACAGGTCTCAGAGGAGAGACTCCGGCTCATGCCTTCTCAGAGCGAAAGCTAG
Protein Sequence
  • >AT1G03140.1
    MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASGGDGKSSGSAPGSSNAATSASSKSSASDAAAIADSKALTDENLILPRQEVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGDRKRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKKLLIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPSQSES