Information report for AT1G03040
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature and News
- Magnetic intensity affects cryptochrome-dependent responses in Arabidopsis thaliana. DOI: 10.1007/s00425-006-0383-0 ; PMID: 16955271
- Characterization of the plant homolog of Nijmegen breakage syndrome 1: Involvement in DNA repair and recombination. DOI: 10.1016/j.bbrc.2006.12.030 ; PMID: 17182003
- CRYPTOCHROME2 in vascular bundles regulates flowering in Arabidopsis. DOI: 10.1105/tpc.106.048157 ; PMID: 17259260
- Phosphoprotein and phosphopeptide interactions with the FHA domain from Arabidopsis kinase-associated protein phosphatase. DOI: 10.1021/bi061763n ; PMID: 17302430
- The signaling state of Arabidopsis cryptochrome 2 contains flavin semiquinone. DOI: 10.1074/jbc.M700616200 ; PMID: 17355959
- Light-regulated large-scale reorganization of chromatin during the floral transition in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03093.x ; PMID: 17470059
- Derepression of the NC80 motif is critical for the photoactivation of Arabidopsis CRY2. DOI: 10.1073/pnas.0701912104 ; PMID: 17438275
- Arabidopsis cryptochrome 2 completes its posttranslational life cycle in the nucleus. DOI: 10.1105/tpc.107.053017 ; PMID: 17965271
- Light induction of Arabidopsis SIG1 and SIG5 transcripts in mature leaves: differential roles of cryptochrome 1 and cryptochrome 2 and dual function of SIG5 in the recognition of plastid promoters. DOI: 10.1111/j.1365-313X.2008.03567.x ; PMID: 18532976
Gene Resources
- UniProt: F4HZA7
- EMBL: CP002684
- AlphaFoldDB: F4HZA7
- EnsemblPlants: AT1G03040.2
- Gramene: AT1G03040.2
- ExpressionAtlas: AT1G03040
- InterPro: IPR011598, IPR036638, IPR045843
- PANTHER: PTHR16223, PTHR16223:SF200
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: F4HZA7
- SWISS-MODEL: F4HZA7
Homologs
- Brassica napus GSBRNA2T00150402001, GSBRNA2T00002665001
- Brassica rapa XP_009119583.1
Sequences
cDNA Sequence
- >AT1G03040.2
TCTGTGTCTCTTCGTCCTCATTAGCTTAAGCATCATCATTCTCTCACCTAACAACTCCACACAAGATTCTTCGCATGGAAAGTTGTTCTTCGACTTCTCTTCTCTAACTCGCTATCTTTTAACTCACCCAGCTCCACTGAGTCGAAAATTTCAAACCTTTACTCGTTTCCTTCATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAGATTTTTGTTCATCCAACGGTCCCCAGCTGATGATTGACATTTTGCTCTGTTTCCCACTACTAGACTTTTGTGACTCATGAAAGGTAAGTAAAAAGGCATTGGAGATGGAATCTAAGTAGGATTTGTGCAGTAAAGAAGTAAAACGGGATCTGTCAAAAGAAGGAAAAAGCTCTCGCTTGCTTGGCTAGTATTTATCATTTTGATGAAAGTAACTCTTTTTTGTTCAAAGACTTTAGTGTGATTTTCAGGACCAAGGGCTTTGAGGGTAGTGCTAGCTGTAGTAATAGTAATGAAGGTGTGGGATCGTGTTTCTGAATTATGTAAAAAAGGAAGAAAAAACAAATGTTGGTATTATATTATGGTTTTGCCTCTC - >AT1G03040.1
TCTGTGTCTCTTCGTCCTCATTAGCTTAAGCATCATCATTCTCTCACCTAACAACTCCACACAAGATTCTTCGCATGGAAAGTTGTTCTTCGACTTCTCTTCTCTAACTCGCTATCTTTTAACTCACCCAGCTCCACTGAGTCGAAAATTTCAAACCTTTACTCGTTTCCTTCATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAGATTTTTGTTCATCCAACGGTCCCCAGCTGATGATTGACATTTTGCTCTGTTTCCCACTACTAGACTTTTGTGACTCATGAAAGGTAAGTAAAAAGGCATTGGAGATGGAATCTAAGTAGGATTTGTGCAGTAAAGAAGTAAAACGGGATCTGTCAAAAGAAGGAAAAAGCTCTCGCTTGCTTGGCTAGTATTTATCATTTTGATGAAAGTAACTCTTTTTTGTTCAAAGACTTTAGTGTGATTTTCAGGACCAAGGGCTTTGAGGGTAGTGCTAGCTGTAGTAATAGTAATGAAGGTGTGGGATCGTGTTTCTGAATTATGTAAAAAAGGAAGAAAAAACAAATGTTGGTATTATATTATGGTTTTGCCTCTC - >AT1G03040.3
TCTGTGTCTCTTCGTCCTCATTAGCTTAAGCATCATCATTCTCTCACCTAACAACTCCACACAAGATTCTTCGCATGGAAAGTTGTTCTTCGACTTCTCTTCTCTAACTCGCTATCTTTTAACTCACCCAGCTCCACTGAGTCGAAAATTTCAAACCTTTACTCGTTTCCTTCATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAGATTTTTGTTCATCCAACGGTCCCCAGCTGATGATTGACATTTTGCTCTGTTTCCCACTACTAGACTTTTGTGACTCATGAAAGGTAAGTAAAAAGGCATTGGAGATGGAATCTAAGTAGGATTTGTGCAGTAAAGAAGTAAAACGGGATCTGTCAAAAGAAGGAAAAAGCTCTCGCTTGCTTGGCTAGTATTTATCATTTTGATGAAAGTAACTCTTTTTTGTTCAAAGACTTTAGTGTGATTTTCAGGACCAAGGGCTTTGAGGGTAGTGCTAGCTGTAGTAATAGTAATGAAGGTGTGGGATCGTGTTTCTGAATTATGTAAAAAAGGAAGAAAAAACAAATGTTGGTATTATATTATGGTTTTGCCTCTC
CDS Sequence
- >AT1G03040.2
ATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAG - >AT1G03040.1
ATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAG - >AT1G03040.3
ATGGCTAATAACAACAACATCCCACATGATAGCATCTCCGATCCATCTCCTACCGACGATTTCTTCGAGCAGATCCTCGGGCTTTCCAACTTCTCCGGTTCTTCAGGTTCTGGTCTCTCTGGAATCGGCGGCGTGGGTCCACCTCCGATGATGCTTCAGCTTGGTTCAGGCAACGAAGGGAATCATAATCATATGGGTGCCATTGGAGGAGGTGGACCTGTAGGGTTTCATAATCAGATGTTTCCGTTGGGATTAAGTCTCGATCAAGGGAAAGGACATGGCTTTCTTAAACCTGATGAAACTGGTAAACGTTTCCAAGACGATGTTCTTGATAATCGATGTTCCTCTATGAAACCTCCAATGTCACAGCCAGCTCCACCAATGCCGCATCAACAGTCTACTATTCGGCCTAGAGTTAGGGCTAGGCGAGGTCAAGCTACCGATCCACATAGCATCGCTGAGAGGCTCCGAAGGGAAAGAATAGCAGAACGGATCAGGTCGTTGCAGGAACTTGTACCTACCGTTAACAAGACAGATAGGGCTGCTATGATCGACGAGATTGTCGATTATGTAAAGTTTCTCAGGCTCCAAGTTAAGGTCCTGAGCATGAGCCGTCTTGGTGGAGCCGGTGCTGTCGCACCACTAGTCACTGAAATGCCATTATCTTCATCAGTTGAGGATGAGACGCAGGCCGTGTGGGAGAAATGGTCAAACGATGGGACAGAGAGGCAAGTGGCTAAGCTGATGGAAGAAAACGTTGGAGCAGCGATGCAACTTTTGCAATCAAAGGCTCTTTGCATAATGCCGATCTCATTGGCAATGGCGATTTACCATTCTCAGCCACCAGACACATCTTCTTCAATCGTCAAACCAGAGATGAATCCTCCACCGTAG
Protein Sequence
- >AT1G03040.2
MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPPP - >AT1G03040.1
MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPPP - >AT1G03040.3
MANNNNIPHDSISDPSPTDDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHNQMFPLGLSLDQGKGHGFLKPDETGKRFQDDVLDNRCSSMKPPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSIVKPEMNPPP