Gene Details:
- Gene ID: AT1G02910
- Gene Symbol: LPA1
- Gene Name: LOW PSII ACCUMULATION1
- Description: tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Germplasm Phenotype:
- SALK_124398 — Increased sensitivity to oryzalin, roots significantly shortened.
- lpa1 — The leaves of the mutant are paler than those of the wild type, and growth is significantly reduced. The leaf area of the mutant is ~75% lower than that of wild-type plants 26 d after germination.
- lpa1 — The mutants have defects in energy transfer within PSII or a partial loss of PSII capacity.
- lpa1 — The relative amounts of the PSII core subunits CP47, CP43, D1, and D2 is greatly reduced in the mutant, especially the PSII dimer.
- lpa1 — Wild-type chloroplasts are larger than those of the mutant and have a larger number of discs per grana stack on average. In addition, the wild-type chloroplasts display well-developed membrane systems composed of grana connected by the stroma lamellae, but the thylakoid membrane systems in mutant chloroplasts are disturbed, and the membrane spacing is not as clear.
Function-related keywords:
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature:
- Biochemical and functional analysis of CTR1, a protein kinase that negatively regulates ethylene signaling in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01620.x ; PMID: 12535337
- Using mutant alleles to determine the structure and function of leucine-rich repeat receptor-like kinases. DOI: 10.1016/s1369-5266(03)00089-x ; PMID: 12972053
- A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. DOI: 10.1093/aob/mch071 ; PMID: 15037448
- Members of the Arabidopsis FAE1-like 3-ketoacyl-CoA synthase gene family substitute for the Elop proteins of Saccharomyces cerevisiae. DOI: 10.1074/jbc.M507723200 ; PMID: 16449229
- Salt stress responses in Arabidopsis utilize a signal transduction pathway related to endoplasmic reticulum stress signaling. DOI: 10.1111/j.1365-313X.2007.03195.x ; PMID: 17662035
- The DAISY gene from Arabidopsis encodes a fatty acid elongase condensing enzyme involved in the biosynthesis of aliphatic suberin in roots and the chalaza-micropyle region of seeds. DOI: 10.1111/j.1365-313X.2008.03674.x ; PMID: 18786002
- Two Arabidopsis 3-ketoacyl CoA synthase genes, KCS20 and KCS2/DAISY, are functionally redundant in cuticular wax and root suberin biosynthesis, but differentially controlled by osmotic stress. DOI: 10.1111/j.1365-313X.2009.03973.x ; PMID: 19619160
- Cuticular wax biosynthesis is up-regulated by the MYB94 transcription factor in Arabidopsis. DOI: 10.1093/pcp/pcu142 ; PMID: 25305760
Sequences:
cDNA Sequence
- >AT1G02910.2
AAACAGAGGAAATAAAAAGCGGATAAAAGTTTTGTTTTTTTTCCGTAAGCGTAGAAGAAAATTGAATGGCTGTGGCTACAGCTCCGTCGCTAAACCGCCATTTCCCCCGCCGCATCTCGAACCTTTACTCGAGAGTTAAGCAACGAAGGCCATGGCTGCCACCAGGAGACGCGACCCTTTTCAATTCTCGCCGGAATTGGGATTCCCATCTGTTTGTTTACGCTTCCTCTTCTTCTTCTCCGTCGTCGTCGCCTCCGTCTCCAAATTCACCGACGGATGATCTCACGGCAGAGTTGTGCGTCAATACTGGTCTTGATCTCTTTAAGAGAGGACGGGTGAAAGATGCTCTTGTTCAGTTTGAAACTGCACTGAGTTTGGCTCCAAATCCTATTGAGTCACAAGCTGCTTACTATAACAAAGCATGTTGTCATGCTTACCGGGGCGAAGGAAAAAAAGCTGTGGATTGCTTGCGAATTGCGTTGAGAGATTATAATCTGAAGTTTGCCACGATTCTTAACGATCCTGATTTAGCATCCTTTCGCGCATTACCCGAGTTTAAGGAGCTGCAAGAAGAGGCTAGGTTAGGCGGGGAAGATATTGGCGATAATTTCCGGAGAGATCTGAAACTTATCAGTGAAGTACGAGCACCGTTTCGTGGCGTTAGAAAATTCTTTTATTTTGCATTTGCAGCAGCAGCGGGTATCTCAATGTTCTTTACCGTACCAAGACTGGTTCAGGCAATTAGAGGCGGTGATGGTGCTCCAAATCTTCTGGAAACTACGGGAAATGCTGCAATTAACATTGGAGGTATTGTTGTTATGGTTTCATTGTTCCTTTGGGAAAACAAGAAAGAGGAAGAACAAATGGTTCAAATAACTCGAGACGAAACTCTTTCCCGGTTGCCTCTACGCCTGTCAACCAACCGCGTTGTTGAACTTGTGCAGCTAAGGGATACAGTTCGACCTGTTATTCTAGCTGGGAAAAAAGAGACTGTTACACTTGCGATGCAAAAAGCAGATAGGTTCAGAACCGAGCTCCTAAGACGAGGTGTTCTCTTAGTTCCTGTGGTATGGGGTGAACGCAAAACACCGGAAATCGAGAAAAAAGGTTTTGGAGCTTCTTCAAAGGCAGCTACATCTCTTCCTTCAATTGGGGTAACGAAAAGATTCTGTCTTTGAAAAAAACAAACAAAATATTCTCATTTTGCAAAACAGTGATGTTCTCTTAACTTGATAGGAAGATTTTGATACACGGGCTCAATCGGTTGTAGCCCAATCGAAGCTGAAAGGTGAAATCAGGTTCAAGGCCGAGACTGTTTCGCCTGGTGAATGGGAAAGGTGGATAAGAGATCAACAGATATCTGAAGGAGTTAACCCGGGCGATGATGTGTACATCATACTGCGGTTAGATGGTCGAGTCCGCAGATCGGGTAGAGGGATGCCGGATTGGGCTGAGATATCGAAGGAGTTACCGCCAATGGATGACGTTCTCAGCAAGTTAGAAAGATGAAACTGTGAAGCTTTCTTAATTCTTACATATTGTATCTTCGTAAAACCTTAGAATTGAGTAGAGAGAACTCATGGGAGAAGAAAAGGTCTGTATTGTTTGTTTGTGTTCAGAAGTCCATGAAATTGATATTTGTGTATGTGAACACAGTTTTTGCATTGTCAAAAGAAAATATTTCTATTAA - >AT1G02910.1
AAACAGAGGAAATAAAAAGCGGATAAAAGTTTTGTTTTTTTTCCGTAAGCGTAGAAGAAAATTGAATGGCTGTGGCTACAGCTCCGTCGCTAAACCGCCATTTCCCCCGCCGCATCTCGAACCTTTACTCGAGAGTTAAGCAACGAAGGCCATGGCTGCCACCAGGAGACGCGACCCTTTTCAATTCTCGCCGGAATTGGGATTCCCATCTGTTTGTTTACGCTTCCTCTTCTTCTTCTCCGTCGTCGTCGCCTCCGTCTCCAAATTCACCGACGGATGATCTCACGGCAGAGTTGTGCGTCAATACTGGTCTTGATCTCTTTAAGAGAGGACGGGTGAAAGATGCTCTTGTTCAGTTTGAAACTGCACTGAGTTTGGCTCCAAATCCTATTGAGTCACAAGCTGCTTACTATAACAAAGCATGTTGTCATGCTTACCGGGGCGAAGGAAAAAAAGCTGTGGATTGCTTGCGAATTGCGTTGAGAGATTATAATCTGAAGTTTGCCACGATTCTTAACGATCCTGATTTAGCATCCTTTCGCGCATTACCCGAGTTTAAGGAGCTGCAAGAAGAGGCTAGGTTAGGCGGGGAAGATATTGGCGATAATTTCCGGAGAGATCTGAAACTTATCAGTGAAGTACGAGCACCGTTTCGTGGCGTTAGAAAATTCTTTTATTTTGCATTTGCAGCAGCAGCGGGTATCTCAATGTTCTTTACCGTACCAAGACTGGTTCAGGCAATTAGAGGCGGTGATGGTGCTCCAAATCTTCTGGAAACTACGGGAAATGCTGCAATTAACATTGGAGGTATTGTTGTTATGGTTTCATTGTTCCTTTGGGAAAACAAGAAAGAGGAAGAACAAATGGTTCAAATAACTCGAGACGAAACTCTTTCCCGGTTGCCTCTACGCCTGTCAACCAACCGCGTTGTTGAACTTGTGCAGCTAAGGGATACAGTTCGACCTGTTATTCTAGCTGGGAAAAAAGAGACTGTTACACTTGCGATGCAAAAAGCAGATAGGTTCAGAACCGAGCTCCTAAGACGAGGTGTTCTCTTAGTTCCTGTGGTATGGGGTGAACGCAAAACACCGGAAATCGAGAAAAAAGGTTTTGGAGCTTCTTCAAAGGCAGCTACATCTCTTCCTTCAATTGGGGTAACGAAAAGATTCTGTCTTTGAAAAAAACAAACAAAATATTCTCATTTTGCAAAACAGTGATGTTCTCTTAACTTGATAGGAAGATTTTGATACACGGGCTCAATCGGTTGTAGCCCAATCGAAGCTGAAAGGTGAAATCAGGTTCAAGGCCGAGACTGTTTCGCCTGGTGAATGGGAAAGGTGGATAAGAGATCAACAGATATCTGAAGGAGTTAACCCGGGCGATGATGTGTACATCATACTGCGGTTAGATGGTCGAGTCCGCAGATCGGGTAGAGGGATGCCGGATTGGGCTGAGATATCGAAGGAGTTACCGCCAATGGATGACGTTCTCAGCAAGTTAGAAAGATGAAACTGTGAAGCTTTCTTAATTCTTACATATTGTATCTTCGTAAAACCTTAGAATTGAGTAGAGAGAACTCATGGGAGAAGAAAAGGTCTGTATTGTTTGTTTGTGTTCAGAAGTCCATGAAATTGATATTTGTGTATGTGAACACAGTTTTTGCATTGTCAAAAGAAAATATTTCTATTAA
CDS Sequence
- >AT1G02910.2
ATGGCTGTGGCTACAGCTCCGTCGCTAAACCGCCATTTCCCCCGCCGCATCTCGAACCTTTACTCGAGAGTTAAGCAACGAAGGCCATGGCTGCCACCAGGAGACGCGACCCTTTTCAATTCTCGCCGGAATTGGGATTCCCATCTGTTTGTTTACGCTTCCTCTTCTTCTTCTCCGTCGTCGTCGCCTCCGTCTCCAAATTCACCGACGGATGATCTCACGGCAGAGTTGTGCGTCAATACTGGTCTTGATCTCTTTAAGAGAGGACGGGTGAAAGATGCTCTTGTTCAGTTTGAAACTGCACTGAGTTTGGCTCCAAATCCTATTGAGTCACAAGCTGCTTACTATAACAAAGCATGTTGTCATGCTTACCGGGGCGAAGGAAAAAAAGCTGTGGATTGCTTGCGAATTGCGTTGAGAGATTATAATCTGAAGTTTGCCACGATTCTTAACGATCCTGATTTAGCATCCTTTCGCGCATTACCCGAGTTTAAGGAGCTGCAAGAAGAGGCTAGGTTAGGCGGGGAAGATATTGGCGATAATTTCCGGAGAGATCTGAAACTTATCAGTGAAGTACGAGCACCGTTTCGTGGCGTTAGAAAATTCTTTTATTTTGCATTTGCAGCAGCAGCGGGTATCTCAATGTTCTTTACCGTACCAAGACTGGTTCAGGCAATTAGAGGCGGTGATGGTGCTCCAAATCTTCTGGAAACTACGGGAAATGCTGCAATTAACATTGGAGGTATTGTTGTTATGGTTTCATTGTTCCTTTGGGAAAACAAGAAAGAGGAAGAACAAATGGTTCAAATAACTCGAGACGAAACTCTTTCCCGGTTGCCTCTACGCCTGTCAACCAACCGCGTTGTTGAACTTGTGCAGCTAAGGGATACAGTTCGACCTGTTATTCTAGCTGGGAAAAAAGAGACTGTTACACTTGCGATGCAAAAAGCAGATAGGTTCAGAACCGAGCTCCTAAGACGAGGTGTTCTCTTAGTTCCTGTGGTATGGGGTGAACGCAAAACACCGGAAATCGAGAAAAAAGGTTTTGGAGCTTCTTCAAAGGCAGCTACATCTCTTCCTTCAATTGGGGTAACGAAAAGATTCTGTCTTTGA - >AT1G02910.1
ATGGCTGTGGCTACAGCTCCGTCGCTAAACCGCCATTTCCCCCGCCGCATCTCGAACCTTTACTCGAGAGTTAAGCAACGAAGGCCATGGCTGCCACCAGGAGACGCGACCCTTTTCAATTCTCGCCGGAATTGGGATTCCCATCTGTTTGTTTACGCTTCCTCTTCTTCTTCTCCGTCGTCGTCGCCTCCGTCTCCAAATTCACCGACGGATGATCTCACGGCAGAGTTGTGCGTCAATACTGGTCTTGATCTCTTTAAGAGAGGACGGGTGAAAGATGCTCTTGTTCAGTTTGAAACTGCACTGAGTTTGGCTCCAAATCCTATTGAGTCACAAGCTGCTTACTATAACAAAGCATGTTGTCATGCTTACCGGGGCGAAGGAAAAAAAGCTGTGGATTGCTTGCGAATTGCGTTGAGAGATTATAATCTGAAGTTTGCCACGATTCTTAACGATCCTGATTTAGCATCCTTTCGCGCATTACCCGAGTTTAAGGAGCTGCAAGAAGAGGCTAGGTTAGGCGGGGAAGATATTGGCGATAATTTCCGGAGAGATCTGAAACTTATCAGTGAAGTACGAGCACCGTTTCGTGGCGTTAGAAAATTCTTTTATTTTGCATTTGCAGCAGCAGCGGGTATCTCAATGTTCTTTACCGTACCAAGACTGGTTCAGGCAATTAGAGGCGGTGATGGTGCTCCAAATCTTCTGGAAACTACGGGAAATGCTGCAATTAACATTGGAGGTATTGTTGTTATGGTTTCATTGTTCCTTTGGGAAAACAAGAAAGAGGAAGAACAAATGGTTCAAATAACTCGAGACGAAACTCTTTCCCGGTTGCCTCTACGCCTGTCAACCAACCGCGTTGTTGAACTTGTGCAGCTAAGGGATACAGTTCGACCTGTTATTCTAGCTGGGAAAAAAGAGACTGTTACACTTGCGATGCAAAAAGCAGATAGGTTCAGAACCGAGCTCCTAAGACGAGGTGTTCTCTTAGTTCCTGTGGTATGGGGTGAACGCAAAACACCGGAAATCGAGAAAAAAGGTTTTGGAGCTTCTTCAAAGGCAGCTACATCTCTTCCTTCAATTGGGGTAACGAAAAGATTCTGTCTTTGA
Protein Sequence
- >AT1G02910.2
MAVATAPSLNRHFPRRISNLYSRVKQRRPWLPPGDATLFNSRRNWDSHLFVYASSSSSPSSSPPSPNSPTDDLTAELCVNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRDYNLKFATILNDPDLASFRALPEFKELQEEARLGGEDIGDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLETTGNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIGVTKRFCL - >AT1G02910.1
MAVATAPSLNRHFPRRISNLYSRVKQRRPWLPPGDATLFNSRRNWDSHLFVYASSSSSPSSSPPSPNSPTDDLTAELCVNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRDYNLKFATILNDPDLASFRALPEFKELQEEARLGGEDIGDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLETTGNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTVRPVILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPEIEKKGFGASSKAATSLPSIGVTKRFCL