Gene Details:
- Gene ID: AT1G02690
- Gene Symbol: IMPA-6
- Gene Name: importin alpha isoform 6
- Description: importin alpha isoform 6;(source:Araport11)
- TAIR Accession: locus:2196140
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0061608 — enables — nuclear import signal receptor activity
- GO:0008139 — enables — nuclear localization sequence binding
- GO:0005737 — located in — cytoplasm
- GO:0006607 — involved in — NLS-bearing protein import into nucleus
- GO:0006606 — involved in — protein import into nucleus
- GO:0005634 — is active in — nucleus
- GO:0010494 — located in — cytoplasmic stress granule
Function-related keywords:
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , guard cell
Literature:
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
- The ATE genes are responsible for repression of transdifferentiation into xylem cells in Arabidopsis. DOI: 10.1104/pp.104.055145 ; PMID: 15618413
- A phase-separated nuclear GBPL circuit controls immunity in plants. DOI: 10.1038/s41586-021-03572-6 ; PMID: 34040255
- Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes. DOI: 10.1104/pp.104.042176 ; PMID: 15208423
- Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis. DOI: 10.1371/journal.pbio.0040143 ; PMID: 16640459
- A C2H2-type zinc finger protein, SGR5, is involved in early events of gravitropism in Arabidopsis inflorescence stems. DOI: 10.1111/j.1365-313X.2006.02807.x ; PMID: 16813575
- The maize INDETERMINATE1 flowering time regulator defines a highly conserved zinc finger protein family in higher plants. DOI: 10.1186/1471-2164-7-158 ; PMID: 16784536
- Activity of transcription factor JACKDAW is essential for SHR/SCR-dependent activation of SCARECROW and MAGPIE and is modulated by reciprocal interactions with MAGPIE, SCARECROW and SHORT ROOT. DOI: 10.1007/s11103-011-9826-5 ; PMID: 21935722
Sequences:
cDNA Sequence
- >AT1G02690.1
CAAATTCAAAAGTTGTGGCAATATCGTGATTAATACTAAAGCCTAAGCCCAATATCGTCTTTTACCCGTAGCCTCCTCGAATCCCGACGTCACGTTGTATAAATTATATCGCATCACTCCAAAACCCTGATTCTCCTGCTCCTTCGTCTTCTTCATCTTCCTCTGAGAAATCAAAAACTCGATCGATCAATTCGTTGTTCGTCTACATCGATTCCTTCAGAACCTAGTGATCCTCTGTTTTGGTTGATTCGATTAAGCTAACCATGTCTTACAAACCAAGCGCGAAGACTGAGGTTCGCCGGAACAGGTATAAAGTATCTGTGGACGCCGATGAAGGTCGCCGGAGACGGGAGGATAACATGGTGGAGATCCGGAAGAACAAGAGAGAGGAGAACTTGCAGAAGAAGCGGCGTGAAGGTTTTAATCCTTCCATGGCGTCACAGCCAGGGCAGGATTTCTCCTCGTCTCTCCCTACGGAAACGAGATTGGAGAATATACAACAGATGATTGCTGGAGTAATGTCAGAGGATAGAGACTTACAATTGGAGGCGACGGCTAGCTTCAGGAGATTGCTTTCAATTGAGCGAAATCCTCCAATCAATGAAGTTGTTCAATCTGGTGTTGTTCCTCACATTGTGCAATTTCTTTCCAGGGATGACTTCACTCAACTTCAGTTTGAGGCAGCTTGGGCGCTTACCAATATCGCTTCAGGGACATCTGAGAACACTAGGGTCATTATTGATAGTGGTGCTGTCCCTTTATTCGTCAAACTTCTTAGTTCTGCAAGTGAGGAAGTTCGAGAACAGGCTGTATGGGCATTGGGAAACGTTGCTGGTGACTCGCCAAAATGTCGTGATCATGTCCTAAGTTGTGAGGCTATGATGTCTCTTCTGGCTCAATTCCATGAGCATTCAAAGCTCTCCATGCTGAGGAATGCTACATGGACATTATCAAATTTCTGCAGAGGGAAGCCGCAGCCTGCATTTGAACAGACAAAAGCAGCTTTACCAGCTCTTGAGCGCCTTCTGCATTCAACCGACGAAGAAGTTCTCACAGATGCATCCTGGGCTCTCTCATATCTCTCTGATGGTACAAACGAGAAAATACAAACTGTTATCGACGCTGGTGTCATCCCTCGCCTTGTTCAGCTCTTGGCTCATCCATCGCCCTCAGTTCTGATTCCAGCTCTCCGTACAATTGGTAACATTGTAACCGGAGATGATATTCAGACTCAGGCGGTTATTAGCAGTCAAGCGCTTCCTGGTCTGTTAAACCTTTTGAAGAACACATACAAGAAGAGTATCAAGAAGGAAGCTTGCTGGACTATCTCTAACATTACAGCTGGGAACACAAGTCAAATTCAAGAAGTGTTTCAGGCAGGCATTATTCGGCCTCTGATTAACCTGCTTGAGATCGGTGAATTCGAAATTAAGAAAGAAGCTGTTTGGGCAATCTCTAATGCAACTTCTGGTGGCAATCATGACCAAATCAAGTTTCTCGTGAGCCAAGGCTGCATCAGACCCCTGTGTGATCTCCTACCGTGTCCCGATCCAAGGGTTGTCACAGTGACTTTGGAAGGTCTAGAAAACATTCTCAAAGTAGGTGAAGCCGAGAAGAATCTAGGCAACACAGGAAACGATAATCTGTACGCGCAGATGATTGAAGACGCAGATGGTTTGGACAAGATTGAGAATCTTCAGAGTCACGATAATAATGAGATTTATGAGAAAGCAGTCAAAATCCTGGAGTCGTATTGGGCTGCAGATGACGAGGAGGAAGATATTGGCGGTGTGGATGCTCCTGAGAATGTTCAGTCTTCCGGTTTCCAATTCGGAAACCAAAGTGGTAATGCTCCTACGGGTGGATTCAACTTTGGTTGAAGGTTTCTGTAGTATTCTCTCAGTTGCTTGAACTTAAGAACAAAGGTCGCTCGTTGTCTTTTCTAAAAACAGTTTAGGTTTTTTTTTCTCTTTTTTGGGTCATGTTTTGAGTGAATTTTGTATTTTTAGAAGTTTGGATATTTTGTTCTCTCGCGTTTAAGGCGGAAATTAAAGTGTTTCACTATCTGCTCTGCTATGTGCTTTTTAAGCTCTCCTGCTAAAAACAATTATGAAATAAATGCGATAAAAATGACTTCTTAAAGCTTCAAAATTTATGCAGAATCAACATCT - >AT1G02690.2
CAAATTCAAAAGTTGTGGCAATATCGTGATTAATACTAAAGCCTAAGCCCAATATCGTCTTTTACCCGTAGCCTCCTCGAATCCCGACGTCACGTTGTATAAATTATATCGCATCACTCCAAAACCCTGATTCTCCTGCTCCTTCGTCTTCTTCATCTTCCTCTGAGAAATCAAAAACTCGATCGATCAATTCGTTGTTCGTCTACATCGATTCCTTCAGAACCTAGTGATCCTCTGTTTTGGTTGATTCGATTAAGCTAACCATGTCTTACAAACCAAGCGCGAAGACTGAGGTTCGCCGGAACAGGTATAAAGTATCTGTGGACGCCGATGAAGGTCGCCGGAGACGGGAGGATAACATGGTGGAGATCCGGAAGAACAAGAGAGAGGAGAACTTGCAGAAGAAGCGGCGTGAAGGTTTTAATCCTTCCATGGCGTCACAGCCAGGGCAGGATTTCTCCTCGTCTCTCCCTACGGAAACGAGATTGGAGAATATACAACAGATGATTGCTGGAGTAATGTCAGAGGATAGAGACTTACAATTGGAGGCGACGGCTAGCTTCAGGAGATTGCTTTCAATTGAGCGAAATCCTCCAATCAATGAAGTTGTTCAATCTGGTGTTGTTCCTCACATTGTGCAATTTCTTTCCAGGGATGACTTCACTCAACTTCAGTTTGAGGCAGCTTGGGCGCTTACCAATATCGCTTCAGGGACATCTGAGAACACTAGGGTCATTATTGATAGTGGTGCTGTCCCTTTATTCGTCAAACTTCTTAGTTCTGCAAGTGAGGAAGTTCGAGAACAGGCTGTATGGGCATTGGGAAACGTTGCTGGTGACTCGCCAAAATGTCGTGATCATGTCCTAAGTTGTGAGGCTATGATGTCTCTTCTGGCTCAATTCCATGAGCATTCAAAGCTCTCCATGCTGAGGAATGCTACATGGACATTATCAAATTTCTGCAGAGGGAAGCCGCAGCCTGCATTTGAACAGACAAAAGCAGCTTTACCAGCTCTTGAGCGCCTTCTGCATTCAACCGACGAAGAAGTTCTCACAGATGCATCCTGGGCTCTCTCATATCTCTCTGATGGTACAAACGAGAAAATACAAACTGTTATCGACGCTGGTGTCATCCCTCGCCTTGTTCAGCTCTTGGCTCATCCATCGCCCTCAGTTCTGATTCCAGCTCTCCGTACAATTGGTAACATTGTAACCGGAGATGATATTCAGACTCAGGCGGTTATTAGCAGTCAAGCGCTTCCTGGTCTGTTAAACCTTTTGAAGAACACATACAAGAAGAGTATCAAGAAGGAAGCTTGCTGGACTATCTCTAACATTACAGCTGGGAACACAAGTCAAATTCAAGAAGTGTTTCAGGCAGGCATTATTCGGCCTCTGATTAACCTGCTTGAGATCGGTGAATTCGAAATTAAGAAAGAAGCTGTTTGGGCAATCTCTAATGCAACTTCTGGTGGCAATCATGACCAAATCAAGTTTCTCGTGAGCCAAGGCTGCATCAGACCCCTGTGTGATCTCCTACCGTGTCCCGATCCAAGGGTTGTCACAGTGACTTTGGAAGGTCTAGAAAACATTCTCAAAGTAGGTGAAGCCGAGAAGAATCTAGGCAACACAGGAAACGATAATCTGTACGCGCAGATGATTGAAGACGCAGATGGTTTGGACAAGATTGAGAATCTTCAGAGTCACGATAATAATGAGATTTATGAGAAAGCAGTCAAAATCCTGGAGTCGTATTGGGCTGCAGATGACGAGGAGGAAGATATTGGCGGTGTGGATGCTCCTGAGAATGTTCAGTCTTCCGGTTTCCAATTCGGAAACCAAAGTGGTAATGCTCCTACGGGTGGATTCAACTTTGGTTGAAGGTTTCTGTAGTATTCTCTCAGTTGCTTGAACTTAAGAACAAAGGTCGCTCGTTGTCTTTTCTAAAAACAGTTTAGGTTTTTTTTTCTCTTTTTTGGGTCATGTTTTGAGTGAATTTTGTATTTTTAGAAGTTTGGATATTTTGTTCTCTCGCGTTTAAGGCGGAAATTAAAGTGTTTCACTATCTGCTCTGCTATGTGCTTTTTAAGCTCTCCTGCTAAAAACAATTATGAAATAAATGCGATAAAAATGACTTCTTAAAGCTTCAAAATTTATGCAGAATCAACATCT
CDS Sequence
- >AT1G02690.1
ATGTCTTACAAACCAAGCGCGAAGACTGAGGTTCGCCGGAACAGGTATAAAGTATCTGTGGACGCCGATGAAGGTCGCCGGAGACGGGAGGATAACATGGTGGAGATCCGGAAGAACAAGAGAGAGGAGAACTTGCAGAAGAAGCGGCGTGAAGGTTTTAATCCTTCCATGGCGTCACAGCCAGGGCAGGATTTCTCCTCGTCTCTCCCTACGGAAACGAGATTGGAGAATATACAACAGATGATTGCTGGAGTAATGTCAGAGGATAGAGACTTACAATTGGAGGCGACGGCTAGCTTCAGGAGATTGCTTTCAATTGAGCGAAATCCTCCAATCAATGAAGTTGTTCAATCTGGTGTTGTTCCTCACATTGTGCAATTTCTTTCCAGGGATGACTTCACTCAACTTCAGTTTGAGGCAGCTTGGGCGCTTACCAATATCGCTTCAGGGACATCTGAGAACACTAGGGTCATTATTGATAGTGGTGCTGTCCCTTTATTCGTCAAACTTCTTAGTTCTGCAAGTGAGGAAGTTCGAGAACAGGCTGTATGGGCATTGGGAAACGTTGCTGGTGACTCGCCAAAATGTCGTGATCATGTCCTAAGTTGTGAGGCTATGATGTCTCTTCTGGCTCAATTCCATGAGCATTCAAAGCTCTCCATGCTGAGGAATGCTACATGGACATTATCAAATTTCTGCAGAGGGAAGCCGCAGCCTGCATTTGAACAGACAAAAGCAGCTTTACCAGCTCTTGAGCGCCTTCTGCATTCAACCGACGAAGAAGTTCTCACAGATGCATCCTGGGCTCTCTCATATCTCTCTGATGGTACAAACGAGAAAATACAAACTGTTATCGACGCTGGTGTCATCCCTCGCCTTGTTCAGCTCTTGGCTCATCCATCGCCCTCAGTTCTGATTCCAGCTCTCCGTACAATTGGTAACATTGTAACCGGAGATGATATTCAGACTCAGGCGGTTATTAGCAGTCAAGCGCTTCCTGGTCTGTTAAACCTTTTGAAGAACACATACAAGAAGAGTATCAAGAAGGAAGCTTGCTGGACTATCTCTAACATTACAGCTGGGAACACAAGTCAAATTCAAGAAGTGTTTCAGGCAGGCATTATTCGGCCTCTGATTAACCTGCTTGAGATCGGTGAATTCGAAATTAAGAAAGAAGCTGTTTGGGCAATCTCTAATGCAACTTCTGGTGGCAATCATGACCAAATCAAGTTTCTCGTGAGCCAAGGCTGCATCAGACCCCTGTGTGATCTCCTACCGTGTCCCGATCCAAGGGTTGTCACAGTGACTTTGGAAGGTCTAGAAAACATTCTCAAAGTAGGTGAAGCCGAGAAGAATCTAGGCAACACAGGAAACGATAATCTGTACGCGCAGATGATTGAAGACGCAGATGGTTTGGACAAGATTGAGAATCTTCAGAGTCACGATAATAATGAGATTTATGAGAAAGCAGTCAAAATCCTGGAGTCGTATTGGGCTGCAGATGACGAGGAGGAAGATATTGGCGGTGTGGATGCTCCTGAGAATGTTCAGTCTTCCGGTTTCCAATTCGGAAACCAAAGTGGTAATGCTCCTACGGGTGGATTCAACTTTGGTTGA - >AT1G02690.2
ATGTCTTACAAACCAAGCGCGAAGACTGAGGTTCGCCGGAACAGGTATAAAGTATCTGTGGACGCCGATGAAGGTCGCCGGAGACGGGAGGATAACATGGTGGAGATCCGGAAGAACAAGAGAGAGGAGAACTTGCAGAAGAAGCGGCGTGAAGGTTTTAATCCTTCCATGGCGTCACAGCCAGGGCAGGATTTCTCCTCGTCTCTCCCTACGGAAACGAGATTGGAGAATATACAACAGATGATTGCTGGAGTAATGTCAGAGGATAGAGACTTACAATTGGAGGCGACGGCTAGCTTCAGGAGATTGCTTTCAATTGAGCGAAATCCTCCAATCAATGAAGTTGTTCAATCTGGTGTTGTTCCTCACATTGTGCAATTTCTTTCCAGGGATGACTTCACTCAACTTCAGTTTGAGGCAGCTTGGGCGCTTACCAATATCGCTTCAGGGACATCTGAGAACACTAGGGTCATTATTGATAGTGGTGCTGTCCCTTTATTCGTCAAACTTCTTAGTTCTGCAAGTGAGGAAGTTCGAGAACAGGCTGTATGGGCATTGGGAAACGTTGCTGGTGACTCGCCAAAATGTCGTGATCATGTCCTAAGTTGTGAGGCTATGATGTCTCTTCTGGCTCAATTCCATGAGCATTCAAAGCTCTCCATGCTGAGGAATGCTACATGGACATTATCAAATTTCTGCAGAGGGAAGCCGCAGCCTGCATTTGAACAGACAAAAGCAGCTTTACCAGCTCTTGAGCGCCTTCTGCATTCAACCGACGAAGAAGTTCTCACAGATGCATCCTGGGCTCTCTCATATCTCTCTGATGGTACAAACGAGAAAATACAAACTGTTATCGACGCTGGTGTCATCCCTCGCCTTGTTCAGCTCTTGGCTCATCCATCGCCCTCAGTTCTGATTCCAGCTCTCCGTACAATTGGTAACATTGTAACCGGAGATGATATTCAGACTCAGGCGGTTATTAGCAGTCAAGCGCTTCCTGGTCTGTTAAACCTTTTGAAGAACACATACAAGAAGAGTATCAAGAAGGAAGCTTGCTGGACTATCTCTAACATTACAGCTGGGAACACAAGTCAAATTCAAGAAGTGTTTCAGGCAGGCATTATTCGGCCTCTGATTAACCTGCTTGAGATCGGTGAATTCGAAATTAAGAAAGAAGCTGTTTGGGCAATCTCTAATGCAACTTCTGGTGGCAATCATGACCAAATCAAGTTTCTCGTGAGCCAAGGCTGCATCAGACCCCTGTGTGATCTCCTACCGTGTCCCGATCCAAGGGTTGTCACAGTGACTTTGGAAGGTCTAGAAAACATTCTCAAAGTAGGTGAAGCCGAGAAGAATCTAGGCAACACAGGAAACGATAATCTGTACGCGCAGATGATTGAAGACGCAGATGGTTTGGACAAGATTGAGAATCTTCAGAGTCACGATAATAATGAGATTTATGAGAAAGCAGTCAAAATCCTGGAGTCGTATTGGGCTGCAGATGACGAGGAGGAAGATATTGGCGGTGTGGATGCTCCTGAGAATGTTCAGTCTTCCGGTTTCCAATTCGGAAACCAAAGTGGTAATGCTCCTACGGGTGGATTCAACTTTGGTTGA
Protein Sequence
- >AT1G02690.1
MSYKPSAKTEVRRNRYKVSVDADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQMIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRDHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPAFEQTKAALPALERLLHSTDEEVLTDASWALSYLSDGTNEKIQTVIDAGVIPRLVQLLAHPSPSVLIPALRTIGNIVTGDDIQTQAVISSQALPGLLNLLKNTYKKSIKKEACWTISNITAGNTSQIQEVFQAGIIRPLINLLEIGEFEIKKEAVWAISNATSGGNHDQIKFLVSQGCIRPLCDLLPCPDPRVVTVTLEGLENILKVGEAEKNLGNTGNDNLYAQMIEDADGLDKIENLQSHDNNEIYEKAVKILESYWAADDEEEDIGGVDAPENVQSSGFQFGNQSGNAPTGGFNFG - >AT1G02690.2
MSYKPSAKTEVRRNRYKVSVDADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQMIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRDHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPAFEQTKAALPALERLLHSTDEEVLTDASWALSYLSDGTNEKIQTVIDAGVIPRLVQLLAHPSPSVLIPALRTIGNIVTGDDIQTQAVISSQALPGLLNLLKNTYKKSIKKEACWTISNITAGNTSQIQEVFQAGIIRPLINLLEIGEFEIKKEAVWAISNATSGGNHDQIKFLVSQGCIRPLCDLLPCPDPRVVTVTLEGLENILKVGEAEKNLGNTGNDNLYAQMIEDADGLDKIENLQSHDNNEIYEKAVKILESYWAADDEEEDIGGVDAPENVQSSGFQFGNQSGNAPTGGFNFG