Gene Details:
- Gene ID: AT1G02680
- Gene Symbol: TAF13
- Gene Name: TBP-associated factor 13
- Description: TBP-associated factor 13;(source:Araport11)
- TAIR Accession: locus:2196040
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0048316 — acts upstream of or within — seed development
- GO:0009960 — acts upstream of or within — endosperm development
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0006366 — involved in — transcription by RNA polymerase II
- GO:0046982 — enables — protein heterodimerization activity
- GO:0005634 — located in — nucleus
Function-related keywords:
- root , vascular leaf , inflorescence , cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature:
- The phytochrome interacting proteins ERF55 and ERF58 repress light-induced seed germination in Arabidopsis thaliana. DOI: 10.1038/s41467-022-29315-3 ; PMID: 35351902
- The AP2/EREBP family of plant transcription factors. DOI: 10.1515/bchm.1998.379.6.633 ; PMID: 9687012
- Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. DOI: 10.1105/tpc.010127 ; PMID: 11487705
- The barley ERF-type transcription factor HvRAF confers enhanced pathogen resistance and salt tolerance in Arabidopsis. DOI: 10.1007/s00425-006-0373-2 ; PMID: 16937017
- The POLARIS peptide of Arabidopsis regulates auxin transport and root growth via effects on ethylene signaling. DOI: 10.1105/tpc.106.040790 ; PMID: 17138700
- Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa. DOI: 10.1016/j.bbrc.2008.04.087 ; PMID: 18442469
- Functional dissection of a strong and specific microbe-associated molecular pattern-responsive synthetic promoter. DOI: 10.1111/pbi.12357 ; PMID: 25819608
- Arabidopsis ERF4 is a transcriptional repressor capable of modulating ethylene and abscisic acid responses. DOI: 10.1007/s11103-005-7294-5 ; PMID: 16021341
Sequences:
cDNA Sequence
- >AT1G02680.1
AATGTGCTTCTTCTACGAGAGAGAGAGAGATCAGTGAACAAGTCCCCGTTTCTTCGTTCTCATCATCTTCATCGCCGATTTTGCAACGACCACCTCTGCTACTCCCGTCGATCAATCTACGAAGAAGAAGAAGAGATGAGTAACACACCAGCAGCGGCGGCGTCATCATCGTCTAAATCGAAAGCTGCGGGAACTTCTCAGCCACAGGAAAAGCGCAAAACTCTCTTTCAAAAAGAATTGCAGCATATGATGTATGGATTTGGCGACGAGCAAAACCCTCTTCCAGAGTCTGTGGCGCTTGTAGAAGACATTGTTGTGGAATACGTCACAGATTTGACACATAAAGCTCAAGAAATTGGTTCAAAGCGAGGAAGACTTCTAGTTGATGATTTCTTGTATCTTATCCGCAAGGATTTGCCAAAACTGAACCGCTGTAGAGAACTGTTGGCGATGCAGGAAGAGCTGAAACAAGCACGCAAAGCTTTTGATGTCGACGAAAAGGAACTCGTTGATTGATCTTGCTTTTCCTCAACGGGAGGAACAAATGCTAGGTAAGAGGAACCTCATGGATGCCGGACTAGGGACAGCGTTTTAGGTTGTAATCAGAATTCGAAGCACAGTAGCAAAAAAAAAGTGTGTTGACTTAAAAAAGGTGAAAAAAAATCTTGCACAAGGCCGACTCATATTAAATGTAGGCCCATTAGAAGAAAGCCCATTATCTAGCATCCCGTATATATCTACGGACGACCTTTAATTTTTCTTGAGTCAGGAATTTCGAAACCCTAAAAATTTAGAATAACCACCCGATTTTTGTTTCTTTCATTAAATTAATTACCGCAATAATTATAAAATTAGTCATCATTATAAGACTTTTGTTTTTCTCTAAATTTTTCGTCATCTTTCTGAT
CDS Sequence
- >AT1G02680.1
ATGAGTAACACACCAGCAGCGGCGGCGTCATCATCGTCTAAATCGAAAGCTGCGGGAACTTCTCAGCCACAGGAAAAGCGCAAAACTCTCTTTCAAAAAGAATTGCAGCATATGATGTATGGATTTGGCGACGAGCAAAACCCTCTTCCAGAGTCTGTGGCGCTTGTAGAAGACATTGTTGTGGAATACGTCACAGATTTGACACATAAAGCTCAAGAAATTGGTTCAAAGCGAGGAAGACTTCTAGTTGATGATTTCTTGTATCTTATCCGCAAGGATTTGCCAAAACTGAACCGCTGTAGAGAACTGTTGGCGATGCAGGAAGAGCTGAAACAAGCACGCAAAGCTTTTGATGTCGACGAAAAGGAACTCGTTGATTGA
Protein Sequence
- >AT1G02680.1
MSNTPAAAASSSSKSKAAGTSQPQEKRKTLFQKELQHMMYGFGDEQNPLPESVALVEDIVVEYVTDLTHKAQEIGSKRGRLLVDDFLYLIRKDLPKLNRCRELLAMQEELKQARKAFDVDEKELVD