AT1G02560

Gene Details

Gene ID: AT1G02560
Gene Symbol: CLPP5, NCLPP1, NCLPP5
Gene Name: nuclear encoded CLP protease 5, NUCLEAR-ENCODED CLPP 1, NUCLEAR CLPP 5
Description: nuclear encoded CLP protease 5;(source:Araport11)
TAIR Accession: locus:2196120
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

GO:0009570 — located in — chloroplast stroma
GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
GO:0009941 — located in — chloroplast envelope
GO:0044283 — acts upstream of or within — small molecule biosynthetic process
GO:0051117 — enables — ATPase binding
GO:0009534 — located in — chloroplast thylakoid
GO:0009532 — located in — plastid stroma
GO:1901565 — acts upstream of or within — organonitrogen compound catabolic process
GO:0009507 — located in — chloroplast
GO:0004252 — enables — serine-type endopeptidase activity
GO:0044248 — acts upstream of or within — cellular catabolic process
GO:0004176 — enables — ATP-dependent peptidase activity
GO:0006778 — acts upstream of or within — porphyrin-containing compound metabolic process
GO:0033993 — acts upstream of or within — response to lipid
GO:0065003 — acts upstream of or within — protein-containing complex assembly
GO:0009579 — located in — thylakoid
GO:0048827 — acts upstream of or within — phyllome development
GO:0009368 — part of — endopeptidase Clp complex
GO:0016070 — acts upstream of or within — RNA metabolic process
GO:0033014 — acts upstream of or within — tetrapyrrole biosynthetic process
GO:0009314 — acts upstream of or within — response to radiation
GO:0006515 — involved in — protein quality control for misfolded or incompletely synthesized proteins
GO:0019538 — acts upstream of or within — protein metabolic process
GO:0009840 — part of — chloroplastic endopeptidase Clp complex
GO:0005576 — located in — extracellular region

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT1G02560.1
CAACACGTGACAATCGCGTTTTGTAAGTACCGAAAGGCGTTAGCGTGTAATATAATCGGACCTAAAATTGACCCGTCCCAATCCTAAATTAACGGGTTCAAAACCCGACCCGATAACACACACACAGATATCACCACCATTAGTCTCACTTCGAAGAAGCAAAACAAAATCCCCAAATTTTCAACAAGGATAAGAGCCGGAAGCTCATCGCCGGTGAACGGAACTAGGGTTTCATTCATCCCCAAATTGATAACAAGAAAATGGCTCATGCTTGCGTCTCTACATCGGCTTCTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCGAAAGCTGTATATTCCGGCAATCTCTGGACACCGGAGATTCCGTCTCCTCAAGGAGTTTGGTCCATTAGAGATGATTTACAAGTCCCTTCTTCGCCGTATTTTCCTGCTTATGCTCAAGGACAAGGACCACCTCCTATGGTGCAAGAACGTTTCCAGAGTATCATTAGTCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGATGACGATATGGCAAACATAATTGTAGCTCAACTCCTGTATCTTGATGCTGTTGATCCTACTAAGGATATTGTCATGTATGTTAATTCTCCTGGTGGATCAGTTACAGCTGGCATGGCTATATTCGATACTATGAGGCACATCCGGCCTGATGTGTCCACTGTTTGTGTTGGTCTAGCTGCTAGTATGGGAGCTTTTCTGCTTAGTGCTGGAACCAAAGGAAAAAGATACAGTCTACCAAACTCAAGGATAATGATCCATCAGCCGCTTGGTGGAGCTCAAGGTGGCCAAACCGACATTGACATTCAGGCAAATGAAATGCTGCATCACAAGGCAAACCTAAACGGTTACCTCGCATACCACACTGGTCAAAGCCTGGAGAAGATAAACCAGGACACAGACCGTGATTTCTTCATGAGTGCCAAAGAAGCAAAAGAGTATGGACTTATCGACGGTGTTATCATGAACCCTCTTAAAGCTCTCCAGCCACTTGCAGCAGCTTAATCGCCTAAAGGTAGTGGTTCAGCTTTAGCACTTGTTCTTTTTTGGGCCTTTGATGAACTGAGATTTTCCATGAAATATGTTTCTATTCTACAAGGAAAATCAGATTTGTTTGGGATCAAACTCTGTAGTTGATACATACATGAAGACCAAAGTAAAGTTTCTTACTGTGCTGTTTGATTGAACAACCTATGATCTTTTAATTTGTTTTACTGAATCTGGTAGTTACACCCAGCTTTGTAGCAACATTCATAATAAGGCTTTTGATGTTGACTGTCTTTAGTGGTAAGGAGTAGAAGATTGATGCATTTTTATCTGACTTCCA

CDS Sequence

>AT1G02560.1
ATGGCTCATGCTTGCGTCTCTACATCGGCTTCTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCGAAAGCTGTATATTCCGGCAATCTCTGGACACCGGAGATTCCGTCTCCTCAAGGAGTTTGGTCCATTAGAGATGATTTACAAGTCCCTTCTTCGCCGTATTTTCCTGCTTATGCTCAAGGACAAGGACCACCTCCTATGGTGCAAGAACGTTTCCAGAGTATCATTAGTCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGATGACGATATGGCAAACATAATTGTAGCTCAACTCCTGTATCTTGATGCTGTTGATCCTACTAAGGATATTGTCATGTATGTTAATTCTCCTGGTGGATCAGTTACAGCTGGCATGGCTATATTCGATACTATGAGGCACATCCGGCCTGATGTGTCCACTGTTTGTGTTGGTCTAGCTGCTAGTATGGGAGCTTTTCTGCTTAGTGCTGGAACCAAAGGAAAAAGATACAGTCTACCAAACTCAAGGATAATGATCCATCAGCCGCTTGGTGGAGCTCAAGGTGGCCAAACCGACATTGACATTCAGGCAAATGAAATGCTGCATCACAAGGCAAACCTAAACGGTTACCTCGCATACCACACTGGTCAAAGCCTGGAGAAGATAAACCAGGACACAGACCGTGATTTCTTCATGAGTGCCAAAGAAGCAAAAGAGTATGGACTTATCGACGGTGTTATCATGAACCCTCTTAAAGCTCTCCAGCCACTTGCAGCAGCTTAA

Protein Sequence

>AT1G02560.1
MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA