Gene Details:

  • Gene ID: AT1G02560
  • Gene Symbol: CLPP5, NCLPP1, NCLPP5
  • Gene Name: nuclear encoded CLP protease 5, NUCLEAR-ENCODED CLPP 1, NUCLEAR CLPP 5
  • Description: nuclear encoded CLP protease 5;(source:Araport11)
  • TAIR Accession: locus:2196120
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
  • PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
  • PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
  • PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
  • PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
  • PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
  • PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
  • PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

  • GO:0009570  — located in — chloroplast stroma
  • GO:0009059  — acts upstream of or within — macromolecule biosynthetic process
  • GO:0009941  — located in — chloroplast envelope
  • GO:0044283  — acts upstream of or within — small molecule biosynthetic process
  • GO:0051117  — enables — ATPase binding
  • GO:0009534  — located in — chloroplast thylakoid
  • GO:0009532  — located in — plastid stroma
  • GO:1901565  — acts upstream of or within — organonitrogen compound catabolic process
  • GO:0009507  — located in — chloroplast
  • GO:0004252  — enables — serine-type endopeptidase activity
  • GO:0044248  — acts upstream of or within — cellular catabolic process
  • GO:0004176  — enables — ATP-dependent peptidase activity
  • GO:0006778  — acts upstream of or within — porphyrin-containing compound metabolic process
  • GO:0033993  — acts upstream of or within — response to lipid
  • GO:0065003  — acts upstream of or within — protein-containing complex assembly
  • GO:0009579  — located in — thylakoid
  • GO:0048827  — acts upstream of or within — phyllome development
  • GO:0009368  — part of — endopeptidase Clp complex
  • GO:0016070  — acts upstream of or within — RNA metabolic process
  • GO:0033014  — acts upstream of or within — tetrapyrrole biosynthetic process
  • GO:0009314  — acts upstream of or within — response to radiation
  • GO:0006515  — involved in — protein quality control for misfolded or incompletely synthesized proteins
  • GO:0019538  — acts upstream of or within — protein metabolic process
  • GO:0009840  — part of — chloroplastic endopeptidase Clp complex
  • GO:0005576  — located in — extracellular region

Literature:

Sequences:

cDNA Sequence
  • >AT1G02560.1
    CAACACGTGACAATCGCGTTTTGTAAGTACCGAAAGGCGTTAGCGTGTAATATAATCGGACCTAAAATTGACCCGTCCCAATCCTAAATTAACGGGTTCAAAACCCGACCCGATAACACACACACAGATATCACCACCATTAGTCTCACTTCGAAGAAGCAAAACAAAATCCCCAAATTTTCAACAAGGATAAGAGCCGGAAGCTCATCGCCGGTGAACGGAACTAGGGTTTCATTCATCCCCAAATTGATAACAAGAAAATGGCTCATGCTTGCGTCTCTACATCGGCTTCTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCGAAAGCTGTATATTCCGGCAATCTCTGGACACCGGAGATTCCGTCTCCTCAAGGAGTTTGGTCCATTAGAGATGATTTACAAGTCCCTTCTTCGCCGTATTTTCCTGCTTATGCTCAAGGACAAGGACCACCTCCTATGGTGCAAGAACGTTTCCAGAGTATCATTAGTCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGATGACGATATGGCAAACATAATTGTAGCTCAACTCCTGTATCTTGATGCTGTTGATCCTACTAAGGATATTGTCATGTATGTTAATTCTCCTGGTGGATCAGTTACAGCTGGCATGGCTATATTCGATACTATGAGGCACATCCGGCCTGATGTGTCCACTGTTTGTGTTGGTCTAGCTGCTAGTATGGGAGCTTTTCTGCTTAGTGCTGGAACCAAAGGAAAAAGATACAGTCTACCAAACTCAAGGATAATGATCCATCAGCCGCTTGGTGGAGCTCAAGGTGGCCAAACCGACATTGACATTCAGGCAAATGAAATGCTGCATCACAAGGCAAACCTAAACGGTTACCTCGCATACCACACTGGTCAAAGCCTGGAGAAGATAAACCAGGACACAGACCGTGATTTCTTCATGAGTGCCAAAGAAGCAAAAGAGTATGGACTTATCGACGGTGTTATCATGAACCCTCTTAAAGCTCTCCAGCCACTTGCAGCAGCTTAATCGCCTAAAGGTAGTGGTTCAGCTTTAGCACTTGTTCTTTTTTGGGCCTTTGATGAACTGAGATTTTCCATGAAATATGTTTCTATTCTACAAGGAAAATCAGATTTGTTTGGGATCAAACTCTGTAGTTGATACATACATGAAGACCAAAGTAAAGTTTCTTACTGTGCTGTTTGATTGAACAACCTATGATCTTTTAATTTGTTTTACTGAATCTGGTAGTTACACCCAGCTTTGTAGCAACATTCATAATAAGGCTTTTGATGTTGACTGTCTTTAGTGGTAAGGAGTAGAAGATTGATGCATTTTTATCTGACTTCCA
CDS Sequence
  • >AT1G02560.1
    ATGGCTCATGCTTGCGTCTCTACATCGGCTTCTTCTCTCAGATTCACAGCTGGATTCGTCTCCGCTAGTCCCAATGGCTCCTCTTTCGATTCTCCCAAGCTTTCTCTTCCTTTCGAGCCTCTCCGTTCAAGGAAGACGAATAAGTTAGTTAGCGATAGAAAGAATTGGAAGAATTCAACTCCGAAAGCTGTATATTCCGGCAATCTCTGGACACCGGAGATTCCGTCTCCTCAAGGAGTTTGGTCCATTAGAGATGATTTACAAGTCCCTTCTTCGCCGTATTTTCCTGCTTATGCTCAAGGACAAGGACCACCTCCTATGGTGCAAGAACGTTTCCAGAGTATCATTAGTCAGCTCTTCCAATATAGGATTATTCGCTGTGGTGGTGCTGTGGATGACGATATGGCAAACATAATTGTAGCTCAACTCCTGTATCTTGATGCTGTTGATCCTACTAAGGATATTGTCATGTATGTTAATTCTCCTGGTGGATCAGTTACAGCTGGCATGGCTATATTCGATACTATGAGGCACATCCGGCCTGATGTGTCCACTGTTTGTGTTGGTCTAGCTGCTAGTATGGGAGCTTTTCTGCTTAGTGCTGGAACCAAAGGAAAAAGATACAGTCTACCAAACTCAAGGATAATGATCCATCAGCCGCTTGGTGGAGCTCAAGGTGGCCAAACCGACATTGACATTCAGGCAAATGAAATGCTGCATCACAAGGCAAACCTAAACGGTTACCTCGCATACCACACTGGTCAAAGCCTGGAGAAGATAAACCAGGACACAGACCGTGATTTCTTCATGAGTGCCAAAGAAGCAAAAGAGTATGGACTTATCGACGGTGTTATCATGAACCCTCTTAAAGCTCTCCAGCCACTTGCAGCAGCTTAA
Protein Sequence
  • >AT1G02560.1
    MAHACVSTSASSLRFTAGFVSASPNGSSFDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAAA