Gene Details:

• Gene ID: AT1G02220
• Gene Symbol: ANAC003, NAC003, XVP
• Gene Name: NAC domain containing protein 3, NAC domain containing protein 3
• Description: NAC domain containing protein 3;(source:Araport11)
• TAIR Accession: locus:2204833
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G02220.1

Plant Ontology Annotations:

• PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
• PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
• PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
• PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
• PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0044248  — acts upstream of or within — cellular catabolic process
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0044255  — acts upstream of or within — cellular lipid metabolic process
• GO:1901565  — acts upstream of or within — organonitrogen compound catabolic process
• GO:0005634  — located in — nucleus
• GO:0098542  — acts upstream of or within — defense response to other organism
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0048367  — acts upstream of or within — shoot system development
• GO:0010150  — acts upstream of or within — leaf senescence
• GO:0032787  — acts upstream of or within — monocarboxylic acid metabolic process
• GO:0050832  — acts upstream of or within — defense response to fungus
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0009737  — acts upstream of or within — response to abscisic acid
• GO:0009414  — acts upstream of or within — response to water deprivation
• GO:0014070  — acts upstream of or within — response to organic cyclic compound
• GO:0005515  — enables — protein binding
• GO:0005886  — located in — plasma membrane

Germplasm Phenotype:

• xvp-d  — Precocious xylem differentiation and altered vascular patterning. Heterozygous plants have fewer layers of cambial cells, resulting in occasional intercalated phloem and xylem cells. Homozygous plants display intercalated phloem and xylem, with no identifiable cambial cells.

Function-related keywords:

• cauline leaf ,  inflorescence meristem ,  carpel ,  petal ,  stem ,  pollen ,  plant sperm cell ,  guard cell

Literature:

• Interactions of Arabidopsis RS domain containing cyclophilins with SR proteins and U1 and U11 small nuclear ribonucleoprotein-specific proteins suggest their involvement in pre-mRNA Splicing.   DOI:  10.1074/jbc.M400270200 ;  PMID:  15166240
• Functional distribution and dynamics of Arabidopsis SR splicing factors in living plant cells.   DOI:  10.1111/j.1365-313X.2004.02321.x ;  PMID:  15686520
• The evolutionarily conserved TOUGH protein is required for proper development of Arabidopsis thaliana.   DOI:  10.1105/tpc.105.031302 ;  PMID:  16024589
• AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that interacts with SR proteins and the C-terminal domain of the RNA polymerase II.   DOI:  10.1261/rna.2226106 ;  PMID:  16497658
• ATP, phosphorylation and transcription regulate the mobility of plant splicing factors.   DOI:  10.1242/jcs.03144 ;  PMID:  16895966
• Implementing a rational and consistent nomenclature for serine/arginine-rich protein splicing factors (SR proteins) in plants.   DOI:  10.1105/tpc.110.078352 ;  PMID:  20884799
• Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing.   DOI:  10.1371/journal.pone.0024542 ;  PMID:  21935421
• Abscisic acid (ABA) regulation of Arabidopsis SR protein gene expression.   DOI:  10.3390/ijms151017541 ;  PMID:  25268622
• Dynamic Distribution and Interaction of the Arabidopsis SRSF1 Subfamily Splicing Factors.   DOI:  10.1104/pp.15.01338 ;  PMID:  26697894
• The Nuclear Ribonucleoprotein SmD1 Interplays with Splicing, RNA Quality Control, and Posttranscriptional Gene Silencing in Arabidopsis.   DOI:  10.1105/tpc.15.01045 ;  PMID:  26842463
• The C3H-type zinc finger protein GDS1/C3H42 is a nuclear-speckle-localized protein that is essential for normal growth and development in Arabidopsis.   DOI:  10.1016/j.plantsci.2016.06.010 ;  PMID:  27457991
• A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway.   DOI:  10.1111/j.1365-313X.2004.02171.x ;  PMID:  15341629
• Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death.   DOI:  10.1111/j.1365-313X.2004.02265.x ;  PMID:  15584951
• Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one.   DOI:  10.1074/jbc.M500694200 ;  PMID:  15824099
• Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase.   DOI:  10.1111/j.1365-313X.2006.02947.x ;  PMID:  17163880
• BAH1/NLA, a RING-type ubiquitin E3 ligase, regulates the accumulation of salicylic acid and immune responses to Pseudomonas syringae DC3000.   DOI:  10.1104/pp.108.124529 ;  PMID:  18753285
• Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1.   DOI:  10.1007/s11103-004-0790-1 ;  PMID:  15604686
• Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant.   DOI:  10.1093/jxb/ert112 ;  PMID:  23682113
• Structure and expression profile of the Arabidopsis PHO1 gene family indicates a broad role in inorganic phosphate homeostasis.   DOI:  10.1104/pp.103.037945 ;  PMID:  15122012

Sequences: