Information report for AT1G02170
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0004197 — enables — cysteine-type endopeptidase activity
- GO:0043068 — acts upstream of or within — positive regulation of programmed cell death
- GO:0005737 — is active in — cytoplasm
- GO:0006508 — involved in — proteolysis
- GO:0005515 — enables — protein binding
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , pollen tube cell , guard cell
Literature and News
- Identification of Key Enzymes for Pectin Synthesis in Seed Mucilage. DOI: 10.1104/pp.18.00584 ; PMID: 30228108
- A DE1 BINDING FACTOR 1-GLABRA2 module regulates rhamnogalacturonan I biosynthesis in Arabidopsis seed coat mucilage. DOI: 10.1093/plcell/koac011 ; PMID: 35038740
- Novel cell wall architecture of isoxaben-habituated Arabidopsis suspension-cultured cells: global transcript profiling and cellular analysis. DOI: 10.1111/j.1365-313X.2004.02208.x ; PMID: 15447652
- The cellulose synthase (CESA) gene superfamily of the moss Physcomitrella patens. DOI: 10.1007/s11103-006-9083-1 ; PMID: 17006591
- An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. DOI: 10.1105/tpc.106.044743 ; PMID: 17172353
- Disruption of ATCSLD5 results in reduced growth, reduced xylan and homogalacturonan synthase activity and altered xylan occurrence in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03281.x ; PMID: 17892446
- Distinct light-initiated gene expression and cell cycle programs in the shoot apex and cotyledons of Arabidopsis. DOI: 10.1105/tpc.107.057075 ; PMID: 18424613
- Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings. DOI: 10.1093/jxb/ern344 ; PMID: 19269997
- A cellulose synthase-like protein is required for osmotic stress tolerance in Arabidopsis. DOI: 10.1111/j.1365-313X.2010.04227.x ; PMID: 20409003
- The cooperative activities of CSLD2, CSLD3, and CSLD5 are required for normal Arabidopsis development. DOI: 10.1093/mp/ssr026 ; PMID: 21471331
- Mannan synthase activity in the CSLD family. DOI: 10.4161/psb.6.10.17989 ; PMID: 21904114
- Divergence and Redundancy in CSLD2 and CSLD3 Function During Arabidopsis Thaliana Root Hair and Female Gametophyte Development. DOI: 10.3389/fpls.2012.00111 ; PMID: 22661983
- Regulation of Meristem Morphogenesis by Cell Wall Synthases in Arabidopsis. DOI: 10.1016/j.cub.2016.04.026 ; PMID: 27212401
Gene Resources
- UniProt: A0A178W8H4
- EMBL: LUHQ01000001
- AlphaFoldDB: A0A178W8H4
- EnsemblPlants: AT1G02170.1
- Gramene: AT1G02170.1
- KEGG: ath:AT1G02170
- Orthologous matrix: MHRIMVT
- ExpressionAtlas: AT1G02170
- InterPro: IPR005735, IPR011600, IPR029030
- PANTHER: PTHR48104, PTHR48104:SF30
- SUPFAM: SSF52129
- Gene3D: 3.40.50.12660
- SWISS-MODEL: A0A178W8H4
Homologs
- Brassica napus GSBRNA2T00122110001
- Malus domestica MDP0000674040
Sequences
cDNA Sequence
- >AT1G02170.1
AAACAGATCCAGGGATTCCAGTAGTGAATTGGGCTTAAAAACTGTTATATGGGCTTTCGAAAGTAAAAGGTTCGGTGAGCTGCCAAAGAAAAGTCAGATGCCTTTAATCGCATTTGACGACGATTCTTTACGTGCGCCATTGACTGCATCGTCGTCTTCCTCACGCGATTTGGTAATCCGATTCGTCTTCATCTGATTCCCTCCCTTCCGAGAATAATAATGTACCCGCCACCTCCCTCAAGCATCTACGCTCCTCCGATGCTGGTGAATTGCTCCGGTTGCCGGACGCCTCTCCAGCTCCCATCCGGCGCCCGATCTATTCGCTGCGCTCTCTGCCAGGCTGTTACTCATATCGCCGACCCTCGCACCGCCCCTCCTCCGCAACCTTCCTCCGCCCCTTCTCCGCCTCCCCAAATCCACGCGCCTCCCGGTCAGCTGCCTCACCCCCATGGCAGGAAGAGGGCCGTGATCTGTGGCATCTCGTATCGTTTCTCTCGCCACGAGCTCAAAGGCTGCATCAACGACGCCAAGTGCATGCGTCACCTTCTCATCAACAAATTCAAATTCTCCCCAGATTCAATTCTCATGCTTACCGAGGAAGAAACTGATCCATATCGTATCCCGACCAAGCAAAACATGAGGATGGCATTGTATTGGCTCGTACAGGGATGCACAGCAGGCGACTCACTTGTCTTCCACTACTCTGGTCATGGTTCGCGTCAAAGAAACTACAACGGTGATGAAGTTGATGGCTATGATGAAACACTCTGTCCTCTGGATTTTGAAACTCAGGGGATGATTGTAGACGATGAGATCAACGCAACCATTGTACGCCCTCTTCCACATGGTGTCAAGCTCCATTCAATTATCGATGCTTGCCATAGTGGTACCGTTCTGGATTTACCCTTCCTATGCAGAATGAACAGAGCTGGGCAGTATGTGTGGGAGGATCATCGGCCTAGGTCAGGTTTGTGGAAAGGAACTGCTGGTGGAGAAGCCATTTCAATTAGTGGATGTGATGATGATCAGACTTCGGCCGACACATCAGCGCTGTCGAAGATCACGTCTACGGGTGCTATGACTTTCTGTTTTATTCAAGCAATTGAACGCAGCGCACAAGGCACAACCTATGGAAGCCTTCTGAATTCTATGCGCACCACAATAAGGAATACAGGGAATGATGGTGGTGGTAGTGGTGGAGTTGTGACGACTGTGCTGAGCATGCTTCTGACAGGGGGAAGTGCGATTGGGGGATTAAGACAGGAGCCTCAACTGACTGCTTGCCAAACATTCGATGTCTATGCAAAGCCTTTCACTCTCTAGTAAAGGACAAGTCACTTTTTATGTATAGCGAGTGTGATTTGAGAATCCGTCCATATAACCACCTTTTGTTTCTTATTTTTATTTTTCTTTCAAAAGAATAAAGGAAAACATTGATTTGGTGATTCGAT
CDS Sequence
- >AT1G02170.1
ATGTACCCGCCACCTCCCTCAAGCATCTACGCTCCTCCGATGCTGGTGAATTGCTCCGGTTGCCGGACGCCTCTCCAGCTCCCATCCGGCGCCCGATCTATTCGCTGCGCTCTCTGCCAGGCTGTTACTCATATCGCCGACCCTCGCACCGCCCCTCCTCCGCAACCTTCCTCCGCCCCTTCTCCGCCTCCCCAAATCCACGCGCCTCCCGGTCAGCTGCCTCACCCCCATGGCAGGAAGAGGGCCGTGATCTGTGGCATCTCGTATCGTTTCTCTCGCCACGAGCTCAAAGGCTGCATCAACGACGCCAAGTGCATGCGTCACCTTCTCATCAACAAATTCAAATTCTCCCCAGATTCAATTCTCATGCTTACCGAGGAAGAAACTGATCCATATCGTATCCCGACCAAGCAAAACATGAGGATGGCATTGTATTGGCTCGTACAGGGATGCACAGCAGGCGACTCACTTGTCTTCCACTACTCTGGTCATGGTTCGCGTCAAAGAAACTACAACGGTGATGAAGTTGATGGCTATGATGAAACACTCTGTCCTCTGGATTTTGAAACTCAGGGGATGATTGTAGACGATGAGATCAACGCAACCATTGTACGCCCTCTTCCACATGGTGTCAAGCTCCATTCAATTATCGATGCTTGCCATAGTGGTACCGTTCTGGATTTACCCTTCCTATGCAGAATGAACAGAGCTGGGCAGTATGTGTGGGAGGATCATCGGCCTAGGTCAGGTTTGTGGAAAGGAACTGCTGGTGGAGAAGCCATTTCAATTAGTGGATGTGATGATGATCAGACTTCGGCCGACACATCAGCGCTGTCGAAGATCACGTCTACGGGTGCTATGACTTTCTGTTTTATTCAAGCAATTGAACGCAGCGCACAAGGCACAACCTATGGAAGCCTTCTGAATTCTATGCGCACCACAATAAGGAATACAGGGAATGATGGTGGTGGTAGTGGTGGAGTTGTGACGACTGTGCTGAGCATGCTTCTGACAGGGGGAAGTGCGATTGGGGGATTAAGACAGGAGCCTCAACTGACTGCTTGCCAAACATTCGATGTCTATGCAAAGCCTTTCACTCTCTAG
Protein Sequence
- >AT1G02170.1
MYPPPPSSIYAPPMLVNCSGCRTPLQLPSGARSIRCALCQAVTHIADPRTAPPPQPSSAPSPPPQIHAPPGQLPHPHGRKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYRIPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVDDEINATIVRPLPHGVKLHSIIDACHSGTVLDLPFLCRMNRAGQYVWEDHRPRSGLWKGTAGGEAISISGCDDDQTSADTSALSKITSTGAMTFCFIQAIERSAQGTTYGSLLNSMRTTIRNTGNDGGGSGGVVTTVLSMLLTGGSAIGGLRQEPQLTACQTFDVYAKPFTL