Gene Details:
- Gene ID: AT1G02150
- Gene Symbol: CCR16
- Gene Name:
- Description: Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2204793
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Gene Ontology:
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0003729 — enables — mRNA binding
- GO:0005739 — is active in — mitochondrion
- GO:0006351 — acts upstream of or within — DNA-templated transcription
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0005739 — located in — mitochondrion
- GO:0009507 — located in — chloroplast
Function-related keywords:
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , guard cell
Literature:
- A predicted interactome for Arabidopsis. DOI: 10.1104/pp.107.103465 ; PMID: 17675552
- IMPa-4, an Arabidopsis importin alpha isoform, is preferentially involved in agrobacterium-mediated plant transformation. DOI: 10.1105/tpc.108.060467 ; PMID: 18836040
- The intrinsically disordered N-terminal region of AtREM1.3 remorin protein mediates protein-protein interactions. DOI: 10.1074/jbc.M112.414292 ; PMID: 23027878
- Identification of Domains and Factors Involved in MINIYO Nuclear Import. DOI: 10.3389/fpls.2019.01044 ; PMID: 31552063
- The Small GTPase Superfamily in Plants: A Conserved Regulatory Module with Novel Functions. DOI: 10.1146/annurev-arplant-112619-025827 ; PMID: 32442390
- Mutation of a family 8 glycosyltransferase gene alters cell wall carbohydrate composition and causes a humidity-sensitive semi-sterile dwarf phenotype in Arabidopsis. DOI: 10.1023/B:PLAN.0000019074.60542.6c ; PMID: 15010604
- Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. DOI: 10.1073/pnas.0600120103 ; PMID: 16540543
- Molecular analysis of a family of Arabidopsis genes related to galacturonosyltransferases. DOI: 10.1104/pp.110.163220 ; PMID: 21300919
Sequences:
cDNA Sequence
- >AT1G02150.1
CATCGGCCTTTGGGCTTTGAGTTACGCGTCACAATTGAATCAATTGGTCCTTTTAATTAGTTTTACCAATATACCCCTCCGTCTTTTCCCCCTTCTCGTTTAGGAAAAAAAATCATTAGCTTCGACTTATCCGAAACCTAACGAGTAACGACGAGAGATGCTTCTTCAGGCGGCGGTGCAGAACCGCAATGTTCCACTGGCTTCTTCCGCCTCCTACTCTCGTCTCCTTCGCTGCAGATCTCCTGTCGTCTCCGTAGCTGCTCTCTCGAAGAAGACGGCAGCAATCGTGTGCTCCATCTCCCAGGTTTATGGCTACGGCACGGTGGACTACGAGAGAAGGCCGATTGTCCAGTGGAATGCCATCTACAAGAAGATTTCGCTGATGGAGAAGCCAGAGCTTGGCGCTGCTTCCGTCTTGAATCAGTGGGAGAAAGCCGGCCGCAAGCTTACCAAGTGGGAGCTCTGTCGGGTCGTCAAGGAGCTTCGCAAGTACAAGCGTGCCAACCAAGCTCTCGAGGTGTACGACTGGATGAACAACAGAGGCGAAAGGTTTCGGTTGTCTGCAAGTGATGCTGCAATCCAGCTCGACTTAATCGGCAAAGTGCGTGGCATTCCAGACGCCGAAGAGTTCTTCCTCCAGCTCCCTGAGAATTTTAAGGACCGGAGAGTTTATGGTTCCCTCCTCAATGCCTATGTGAGGGCCAAGTCGAGAGAAAAGGCTGAAGCCCTGCTCAACACCATGAGGGACAAAGGTTACGCCCTGCACCCGCTTCCCTTCAACGTCATGATGACTCTCTACATGAACCTCAGGGAGTATGACAAAGTCGACGCTATGGTCTTCGAGATGAAGCAGAAAGATATACGTCTCGACATTTACTCCTACAACATCTGGCTCTCCTCTTGCGGCTCCTTAGGATCAGTTGAGAAAATGGAACTAGTGTATCAGCAGATGAAATCGGATGTTTCCATTTATCCCAACTGGACCACGTTTAGCACAATGGCCACAATGTACATAAAGATGGGTGAAACTGAGAAAGCCGAAGATGCACTGAGGAAGGTTGAAGCAAGGATTACTGGTCGTAATCGCATTCCGTATCACTACCTCTTGAGTTTGTATGGCAGCCTTGGTAACAAGAAAGAGCTGTACCGAGTCTGGCACGTCTACAAATCTGTTGTCCCGAGCATTCCCAATTTGGGTTACCATGCCTTGGTCTCGTCGCTGGTGAGGATGGGAGACATTGAAGGGGCCGAGAAGGTATATGAGGAATGGCTTCCAGTCAAGTCTTCTTATGACCCCAGGATACCAAATCTTCTGATGAATGCGTATGTCAAAAACGACCAACTAGAGACAGCTGAGGGGTTGTTCGACCACATGGTTGAAATGGGAGGAAAACCAAGTTCAAGTACGTGGGAGATTCTAGCTGTTGGTCATACCAGAAAGAGGTGTATTTCAGAGGCTTTGACTTGTCTTAGAAATGCTTTTTCGGCTGAAGGGTCCAGCAATTGGAGGCCCAAGGTGTTGATGCTGTCTGGTTTCTTCAAGCTCTGTGAAGAGGAATCGGATGTTACCAGTAAAGAGGCCGTTTTGGAATTGTTAAGGCAGTCGGGGGATCTTGAAGACAAATCTTACCTAGCTCTTATTGATGTGGACGAAAACAGAACAGTAAACAACAGTGAAATCGATGCCCATGAGACCGATGCGCTTCTAACACAGCTACAAGATGATTTGTAATCTGATAGTCCTAGATCTTTGCTTTAAAAAACGAATCTTGTAACCGGAGTCAACTGAGGAAATGCGAAATATGTATAATGTACACAAGAGACTGCCTAGTGAAACATGAATGTAAGAGCTGTGTCCCTTTTTGTGACAGCTATTTGGAATTAGTGTTGCTTAGGGAACTGGATTAGCCTTTGTTCTCTTGTTTGATTGTTGTTACTTGTTAAGACTAATATTGGAGAGGTTAGGTTGTGCTCTTTTA
CDS Sequence
- >AT1G02150.1
ATGCTTCTTCAGGCGGCGGTGCAGAACCGCAATGTTCCACTGGCTTCTTCCGCCTCCTACTCTCGTCTCCTTCGCTGCAGATCTCCTGTCGTCTCCGTAGCTGCTCTCTCGAAGAAGACGGCAGCAATCGTGTGCTCCATCTCCCAGGTTTATGGCTACGGCACGGTGGACTACGAGAGAAGGCCGATTGTCCAGTGGAATGCCATCTACAAGAAGATTTCGCTGATGGAGAAGCCAGAGCTTGGCGCTGCTTCCGTCTTGAATCAGTGGGAGAAAGCCGGCCGCAAGCTTACCAAGTGGGAGCTCTGTCGGGTCGTCAAGGAGCTTCGCAAGTACAAGCGTGCCAACCAAGCTCTCGAGGTGTACGACTGGATGAACAACAGAGGCGAAAGGTTTCGGTTGTCTGCAAGTGATGCTGCAATCCAGCTCGACTTAATCGGCAAAGTGCGTGGCATTCCAGACGCCGAAGAGTTCTTCCTCCAGCTCCCTGAGAATTTTAAGGACCGGAGAGTTTATGGTTCCCTCCTCAATGCCTATGTGAGGGCCAAGTCGAGAGAAAAGGCTGAAGCCCTGCTCAACACCATGAGGGACAAAGGTTACGCCCTGCACCCGCTTCCCTTCAACGTCATGATGACTCTCTACATGAACCTCAGGGAGTATGACAAAGTCGACGCTATGGTCTTCGAGATGAAGCAGAAAGATATACGTCTCGACATTTACTCCTACAACATCTGGCTCTCCTCTTGCGGCTCCTTAGGATCAGTTGAGAAAATGGAACTAGTGTATCAGCAGATGAAATCGGATGTTTCCATTTATCCCAACTGGACCACGTTTAGCACAATGGCCACAATGTACATAAAGATGGGTGAAACTGAGAAAGCCGAAGATGCACTGAGGAAGGTTGAAGCAAGGATTACTGGTCGTAATCGCATTCCGTATCACTACCTCTTGAGTTTGTATGGCAGCCTTGGTAACAAGAAAGAGCTGTACCGAGTCTGGCACGTCTACAAATCTGTTGTCCCGAGCATTCCCAATTTGGGTTACCATGCCTTGGTCTCGTCGCTGGTGAGGATGGGAGACATTGAAGGGGCCGAGAAGGTATATGAGGAATGGCTTCCAGTCAAGTCTTCTTATGACCCCAGGATACCAAATCTTCTGATGAATGCGTATGTCAAAAACGACCAACTAGAGACAGCTGAGGGGTTGTTCGACCACATGGTTGAAATGGGAGGAAAACCAAGTTCAAGTACGTGGGAGATTCTAGCTGTTGGTCATACCAGAAAGAGGTGTATTTCAGAGGCTTTGACTTGTCTTAGAAATGCTTTTTCGGCTGAAGGGTCCAGCAATTGGAGGCCCAAGGTGTTGATGCTGTCTGGTTTCTTCAAGCTCTGTGAAGAGGAATCGGATGTTACCAGTAAAGAGGCCGTTTTGGAATTGTTAAGGCAGTCGGGGGATCTTGAAGACAAATCTTACCTAGCTCTTATTGATGTGGACGAAAACAGAACAGTAAACAACAGTGAAATCGATGCCCATGAGACCGATGCGCTTCTAACACAGCTACAAGATGATTTGTAA
Protein Sequence
- >AT1G02150.1
MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKTAAIVCSISQVYGYGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAHETDALLTQLQDDL