Information report for AT1G02050
Gene Details
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Functional Descriptions
- PO:0009066 — anther — antera (Spanish, exact), 半葯,花粉のう (Japanese, exact), Poaceae anther (narrow), Zea anther (narrow)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0030639 — involved in — polyketide biosynthetic process
- GO:0080110 — acts upstream of or within — sporopollenin biosynthetic process
- GO:0016747 — enables — acyltransferase activity, transferring groups other than amino-acyl groups
- GO:0010584 — acts upstream of or within — pollen exine formation
- GO:0030639 — acts upstream of or within — polyketide biosynthetic process
- GO:0005515 — enables — protein binding
- GO:0005737 — located in — cytoplasm
- GO:0009813 — involved in — flavonoid biosynthetic process
- GO:0005783 — located in — endoplasmic reticulum
- GO:0090439 — enables — tetraketide alpha-pyrone synthase activity
- CS68659 — Abnormal exine patterning. Pollen has a more extensively covered surface with broader muri and smaller lacunae. Reduced accumulation of flavonoid precursors and flavonoids in developing anthers.
Functional Keywords
- anther , seed , petal , guard cell
Literature and News
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- Three MYB transcription factors control pollen tube differentiation required for sperm release. DOI: 10.1016/j.cub.2013.05.021 ; PMID: 23791732
- Identification of clp genes expressed in senescing Arabidopsis leaves. DOI: 10.1093/oxfordjournals.pcp.a029571 ; PMID: 10427773
- Identification of a 350-kDa ClpP protease complex with 10 different Clp isoforms in chloroplasts of Arabidopsis thaliana. DOI: 10.1074/jbc.M010503200 ; PMID: 11278690
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Clp protease complexes from photosynthetic and non-photosynthetic plastids and mitochondria of plants, their predicted three-dimensional structures, and functional implications. DOI: 10.1074/jbc.M309212200 ; PMID: 14593120
- Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis. DOI: 10.1105/tpc.104.030254 ; PMID: 15829605
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Downregulation of ClpR2 leads to reduced accumulation of the ClpPRS protease complex and defects in chloroplast biogenesis in Arabidopsis. DOI: 10.1105/tpc.106.042861 ; PMID: 16766689
- Structural and functional insights into the chloroplast ATP-dependent Clp protease in Arabidopsis. DOI: 10.1105/tpc.106.044594 ; PMID: 16980539
- Protease gene families in Populus and Arabidopsis. DOI: 10.1186/1471-2229-6-30 ; PMID: 17181860
- Proteomic analysis of S-nitrosylated proteins in Arabidopsis thaliana undergoing hypersensitive response. DOI: 10.1002/pmic.200700536 ; PMID: 18297659
- Subunits of the plastid ClpPR protease complex have differential contributions to embryogenesis, plastid biogenesis, and plant development in Arabidopsis. DOI: 10.1105/tpc.108.063784 ; PMID: 19525416
- Modified Clp protease complex in the ClpP3 null mutant and consequences for chloroplast development and function in Arabidopsis. DOI: 10.1104/pp.113.215699 ; PMID: 23548781
- The E3 ligase AtCHIP positively regulates Clp proteolytic subunit homeostasis. DOI: 10.1093/jxb/erv286 ; PMID: 26085677
- Autocatalytic Processing and Substrate Specificity of Arabidopsis Chloroplast Glutamyl Peptidase. DOI: 10.1104/pp.20.00752 ; PMID: 32663165
Gene Resources
- UniProt: A0A178WKY7
- EMBL: LUHQ01000001
- AlphaFoldDB: A0A178WKY7
- EnsemblPlants: AT1G02050.1
- Gramene: AT1G02050.1
- KEGG: ath:AT1G02050
- Orthologous matrix: GQESPFM
- ExpressionAtlas: AT1G02050
- InterPro: IPR001099, IPR011141, IPR012328
- PANTHER: PTHR11877, PTHR11877:SF46
- SUPFAM: SSF53901
- Gene3D: 3.40.47.10
- SWISS-MODEL: A0A178WKY7
- Conserved Domain Database: cd00831
Homologs
- Brassica napus BnaA03.TT4, BnaC02.TT4
- Oryza sativa OsPKS1;YY2, OsPKS2, CHS;OsCHS1
Sequences
cDNA Sequence
- >AT1G02050.1
CTGTTCCTAACTTTCACCTTCATGGTACCTATTTCCTAAGTAGATTAGGCTTATATTACTTATCCCGGGAAAATAGGTTTCATGGTGTTTTTTGCATTTCTAACCAACACAGGCCAAAGAATCACCAAACCCTAATAAAATAACCGTTTCTCTCTTTACATGATCTTCACTCTTCAGCACCAAACTCTCCCCAAGAAAACCCTCAACCCTTCCTTTATAATCCTTTGCCATTTGCTGATATTCTGCATCCACCATCTTTCTTCCCAATATCTAATTGAGTTTTTTCCTTCTGCGCTTGAAAAGAAATGTCGAATTCTAGGATGAATGGTGTTGAGAAGCTAAGCAGCAAATCCACAAGGCGTGTCGCAAATGCCGGAAAGGCAACACTGCTTGCTCTTGGCAAAGCCTTCCCAAGCCAAGTCGTTCCTCAGGAGAATCTAGTGGAAGGATTTCTACGAGACACCAAATGTGATGACGCGTTTATCAAAGAAAAGCTGGAACACTTGTGCAAAACGACAACCGTGAAGACGCGATACACTGTGTTGACGCGAGAGATACTGGCTAAATACCCTGAGCTAACAACAGAGGGTTCACCAACAATCAAGCAAAGACTTGAAATTGCAAACGAGGCGGTTGTGGAAATGGCATTGGAAGCCAGTTTAGGTTGCATCAAGGAATGGGGAAGGCCAGTGGAAGACATCACTCACATTGTCTACGTTTCCTCAAGCGAGATCCGTTTACCCGGTGGTGACCTTTACCTCTCAGCAAAGCTAGGCCTGAGGAATGACGTGAACAGAGTGATGCTGTATTTTCTGGGATGCTACGGAGGTGTGACTGGCCTCCGTGTGGCCAAAGACATTGCTGAGAACAACCCCGGAAGCCGTGTTCTGCTCACAACCTCTGAAACCACCATTCTCGGATTTCGGCCACCAAACAAAGCGCGTCCGTACGACCTAGTTGGAGCTGCTCTGTTTGGAGATGGTGCAGCTGCTGTGATCATCGGAGCTGACCCGAGAGAGTGTGAAGCTCCTTTCATGGAGCTGCACTATGCGGTTCAGCAGTTCTTGCCGGGGACACAGAACGTGATCGAGGGGAGGTTGACTGAGGAAGGCATAAACTTCAAGCTTGGACGAGACCTCCCGCAGAAGATAGAGGAGAACATAGAAGAGTTCTGCAAGAAGCTGATGGGAAAGGCTGGCGATGAGTCGATGGAGTTCAATGACATGTTCTGGGCTGTTCATCCAGGAGGACCTGCGATTCTGAACCGTCTGGAGACAAAACTGAAGCTGGAGAAAGAGAAGCTGGAGAGCAGCAGAAGGGCGTTGGTGGATTACGGGAACGTGAGCAGCAACACGATACTGTATGTGATGGAGTATATGAGAGATGAGCTGAAGAAGAAAGGTGACGCAGCACAAGAGTGGGGACTTGGCTTAGCTTTCGGACCTGGAATCACCTTCGAAGGCCTTCTCATCCGCAGCCTCACCTCTTCCTAATTGTTATAATTTACATTTGGGTTATAAACATATTGTAAGCATGAAAT
CDS Sequence
- >AT1G02050.1
ATGTCGAATTCTAGGATGAATGGTGTTGAGAAGCTAAGCAGCAAATCCACAAGGCGTGTCGCAAATGCCGGAAAGGCAACACTGCTTGCTCTTGGCAAAGCCTTCCCAAGCCAAGTCGTTCCTCAGGAGAATCTAGTGGAAGGATTTCTACGAGACACCAAATGTGATGACGCGTTTATCAAAGAAAAGCTGGAACACTTGTGCAAAACGACAACCGTGAAGACGCGATACACTGTGTTGACGCGAGAGATACTGGCTAAATACCCTGAGCTAACAACAGAGGGTTCACCAACAATCAAGCAAAGACTTGAAATTGCAAACGAGGCGGTTGTGGAAATGGCATTGGAAGCCAGTTTAGGTTGCATCAAGGAATGGGGAAGGCCAGTGGAAGACATCACTCACATTGTCTACGTTTCCTCAAGCGAGATCCGTTTACCCGGTGGTGACCTTTACCTCTCAGCAAAGCTAGGCCTGAGGAATGACGTGAACAGAGTGATGCTGTATTTTCTGGGATGCTACGGAGGTGTGACTGGCCTCCGTGTGGCCAAAGACATTGCTGAGAACAACCCCGGAAGCCGTGTTCTGCTCACAACCTCTGAAACCACCATTCTCGGATTTCGGCCACCAAACAAAGCGCGTCCGTACGACCTAGTTGGAGCTGCTCTGTTTGGAGATGGTGCAGCTGCTGTGATCATCGGAGCTGACCCGAGAGAGTGTGAAGCTCCTTTCATGGAGCTGCACTATGCGGTTCAGCAGTTCTTGCCGGGGACACAGAACGTGATCGAGGGGAGGTTGACTGAGGAAGGCATAAACTTCAAGCTTGGACGAGACCTCCCGCAGAAGATAGAGGAGAACATAGAAGAGTTCTGCAAGAAGCTGATGGGAAAGGCTGGCGATGAGTCGATGGAGTTCAATGACATGTTCTGGGCTGTTCATCCAGGAGGACCTGCGATTCTGAACCGTCTGGAGACAAAACTGAAGCTGGAGAAAGAGAAGCTGGAGAGCAGCAGAAGGGCGTTGGTGGATTACGGGAACGTGAGCAGCAACACGATACTGTATGTGATGGAGTATATGAGAGATGAGCTGAAGAAGAAAGGTGACGCAGCACAAGAGTGGGGACTTGGCTTAGCTTTCGGACCTGGAATCACCTTCGAAGGCCTTCTCATCCGCAGCCTCACCTCTTCCTAA
Protein Sequence
- >AT1G02050.1
MSNSRMNGVEKLSSKSTRRVANAGKATLLALGKAFPSQVVPQENLVEGFLRDTKCDDAFIKEKLEHLCKTTTVKTRYTVLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPRECEAPFMELHYAVQQFLPGTQNVIEGRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFWAVHPGGPAILNRLETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDAAQEWGLGLAFGPGITFEGLLIRSLTSS