Information report for AT1G02000
Gene Details
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Functional Descriptions
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0050378 — enables — UDP-glucuronate 4-epimerase activity
Functional Keywords
- fruit , root , vascular leaf , inflorescence , cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , pollen tube cell , guard cell
Literature and News
- AtSAMS regulates floral organ development by DNA methylation and ethylene signaling pathway. DOI: 10.1016/j.plantsci.2023.111767 ; PMID: 37302530
- Evaluation of two-dimensional electrophoresis and liquid chromatography–tandem mass spectrometry for tissue-specific protein profiling of laser-microdissected plant samples. DOI: 10.1002/elps.200410399 ; PMID: 15971193
- A reference map of the Arabidopsis thaliana mature pollen proteome. DOI: 10.1016/j.bbrc.2005.09.185 ; PMID: 16242667
- Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. DOI: 10.1093/jxb/erm207 ; PMID: 17916636
- Isolation of AtSUC2 promoter-GFP-marked companion cells for patch-clamp studies and expression profiling. DOI: 10.1046/j.1365-313x.2003.01931.x ; PMID: 14675456
Gene Resources
- UniProt: A0A178WEE4
- EMBL: CACRSJ010000104, CACSHJ010000087, LR881466
- AlphaFoldDB: A0A178WEE4
- EnsemblPlants: AT1G02000.1
- Gramene: AT1G02000.1
- KEGG: ath:AT1G02000
- Orthologous matrix: WYLGYYK
- ExpressionAtlas: AT1G02000
- InterPro: IPR001509, IPR036291
- PANTHER: PTHR43574
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- OrthoDB: A0A178WEE4
- SWISS-MODEL: A0A178WEE4
Homologs
- Glycine max ST1
- Malus domestica MDP0000247737
Sequences
cDNA Sequence
- >AT1G02000.1
GACAGAATGAGTAAGTAAACCCCATTAAAAAGGGCCGATGATAGAAAAACACCGTGGAATTAAACGAGAGCACTAATCTCATTTAATTAGTTACAGGTAAAAAGAGAGTCAACTAACTAATTAATGGTTAGATCTCTCTCTACTTCCCCTTGATTTGTTACAGTTTACTCTCTTCTTAACCATTTTTGAAATTTGAAAAGAAATTTTTTGATTGGACATTTTTTCTTTTAAAAAAAGAAATAATAAGATTGTTGATGTAGCCATAGAAACCGGGAGGCACAAAAAACGGCAACCAAAGAAAGGAAAGGAAAGAAAGAAAACAAAAGGAGTCCAAGAAACCAGAAGATTGTCTCCCGACGCCATTATCCTTCACCCTCGGAGCTTTTCTTGAAGCAGGGATTCTTCTAATCATTAATCCCTACTTCTTTCTTTCTTTTTTGTTTGTTCTCCTTTGAGATCTATCTAGTACTAGTAGTAAAACCCCCTCCCCTCCATTGAATTTGAATTGAATTGAATCTCTGGGAATCAAATCTTTGATGTCGCATCTGGACGACATTCCTTCTACGCCTGGGAAATTCAAGATGATGGATAAATCCCCCTTCTTCCTGCACCGTACTCGTTGGCAATCCTCCGTCGCCAAGCTTGCCTTTTGGTCCCTTGTCTTTTTCGGATTGCTCTTCATCTTCTTCTACCGATCTCCCATCTCCAATCCCGATTCCTCTCGCCGCTCTCTTCGCACCTACTCTTGGGGCGGTCCCGCCTGGGAGAAACGCGTCCGATCCTCCGCTCGTGTCCGCACCCGCAACGGCGTCTCCGTTCTCGTCACCGGGGCCGCCGGTTTCGTCGGGACTCACGTCTCTGCCGCTCTTAAACGACGCGGCGACGGCGTTCTAGGCCTCGACAACTTCAACGATTACTACGACACCTCTCTCAAGAGATCTCGACAAGCCCTCCTCGAGAGAAGCGGAGTGTTCATCGTTGAAGGAGACATCAACGATCTGTCTCTCCTCAAGAAGCTCTTCGAGGTCGTCCCTTTCACTCACGTCATGCATCTTGCCGCTCAAGCTGGTGTCAGATACGCCATGGAGAACCCCGGCTCCTACGTTCACAGCAACATCGCTGGTTTCGTTAACCTCCTCGAGGTCTGTAAATCCGCTAATCCTCAGCCGGCGATCGTGTGGGCATCGTCTAGCTCCGTCTACGGTTTAAACACCAAAGTCCCCTTCTCTGAGAAAGACAGAACAGATCAGCCTGCGAGTCTCTACGCTGCGACCAAGAAAGCTGGAGAAGAGATTGCCCACACTTACAACCACATCTACGGGCTCTCTCTCACCGGCTTGAGGTTTTTCACGGTGTACGGGCCGTGGGGAAGACCTGACATGGCTTACTTCTTCTTCACCAGAGACATCCTCAAAGGGAAAGCTATTTCGATCTTCGAAGGAGCCAATCACGGAACAGTGGCTAGGGATTTCACATACATCGATGACATAGTGAAAGGATGTTTGGGGGCTCTGGACACGGCGGAGAAGAGCACAGGGAGTGGTGGCAAGAAGCGGGGAGCGGCTCAGCTAAGGGTATTCAACCTGGGGAACACATCTCCGGTGCCGGTGACGGATCTTGTGAGTATATTGGAGAGATTGTTGAAAGTGAAAGCCAAGAGGAACATGATGAAGCTGCCGAGGAATGGTGATGTGCCCTTCACACATGCTAATATCAGTTCGGCACAGAGAGAGTTTGGGTACAAACCAAGCACGGATTTGCAGACTGGTCTAAAGAAGTTTGTGAGATGGTATCTTGGTTACTACAAGCAGGGGGGAAAGAAAGTTGCTGCTGCTGCTTGAATATTGATAATTCACAAGATTCTTTAGTGTATAGTGAGTGAGTGGATTGATACACACCATAAAGAAGAGACATGATTCATTCGAGATTATATATTCTTTACATTTGTATTCTGCTTTGTAATTTCGATCTCTTGAGTCGAATCTCTGATATTTATTTCATAGGAAGTTCACATTAATCTCTGTTATTCAACCGATGGAGCCAGAGAGAGTAATGAATATGATATATACATTATGCTATAAAGCTGAA
CDS Sequence
- >AT1G02000.1
ATGTCGCATCTGGACGACATTCCTTCTACGCCTGGGAAATTCAAGATGATGGATAAATCCCCCTTCTTCCTGCACCGTACTCGTTGGCAATCCTCCGTCGCCAAGCTTGCCTTTTGGTCCCTTGTCTTTTTCGGATTGCTCTTCATCTTCTTCTACCGATCTCCCATCTCCAATCCCGATTCCTCTCGCCGCTCTCTTCGCACCTACTCTTGGGGCGGTCCCGCCTGGGAGAAACGCGTCCGATCCTCCGCTCGTGTCCGCACCCGCAACGGCGTCTCCGTTCTCGTCACCGGGGCCGCCGGTTTCGTCGGGACTCACGTCTCTGCCGCTCTTAAACGACGCGGCGACGGCGTTCTAGGCCTCGACAACTTCAACGATTACTACGACACCTCTCTCAAGAGATCTCGACAAGCCCTCCTCGAGAGAAGCGGAGTGTTCATCGTTGAAGGAGACATCAACGATCTGTCTCTCCTCAAGAAGCTCTTCGAGGTCGTCCCTTTCACTCACGTCATGCATCTTGCCGCTCAAGCTGGTGTCAGATACGCCATGGAGAACCCCGGCTCCTACGTTCACAGCAACATCGCTGGTTTCGTTAACCTCCTCGAGGTCTGTAAATCCGCTAATCCTCAGCCGGCGATCGTGTGGGCATCGTCTAGCTCCGTCTACGGTTTAAACACCAAAGTCCCCTTCTCTGAGAAAGACAGAACAGATCAGCCTGCGAGTCTCTACGCTGCGACCAAGAAAGCTGGAGAAGAGATTGCCCACACTTACAACCACATCTACGGGCTCTCTCTCACCGGCTTGAGGTTTTTCACGGTGTACGGGCCGTGGGGAAGACCTGACATGGCTTACTTCTTCTTCACCAGAGACATCCTCAAAGGGAAAGCTATTTCGATCTTCGAAGGAGCCAATCACGGAACAGTGGCTAGGGATTTCACATACATCGATGACATAGTGAAAGGATGTTTGGGGGCTCTGGACACGGCGGAGAAGAGCACAGGGAGTGGTGGCAAGAAGCGGGGAGCGGCTCAGCTAAGGGTATTCAACCTGGGGAACACATCTCCGGTGCCGGTGACGGATCTTGTGAGTATATTGGAGAGATTGTTGAAAGTGAAAGCCAAGAGGAACATGATGAAGCTGCCGAGGAATGGTGATGTGCCCTTCACACATGCTAATATCAGTTCGGCACAGAGAGAGTTTGGGTACAAACCAAGCACGGATTTGCAGACTGGTCTAAAGAAGTTTGTGAGATGGTATCTTGGTTACTACAAGCAGGGGGGAAAGAAAGTTGCTGCTGCTGCTTGA
Protein Sequence
- >AT1G02000.1
MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYYKQGGKKVAAAA