Information report for AT1G01980
Gene Details
|
|
Functional Descriptions
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0048638 — acts upstream of or within — regulation of developmental growth
- GO:0009505 — located in — plant-type cell wall
- GO:0071949 — enables — FAD binding
- GO:0009507 — located in — chloroplast
- GO:0016899 — enables — oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
- GO:0005886 — located in — plasma membrane
- GO:0005794 — located in — Golgi apparatus
- GO:2000241 — acts upstream of or within — regulation of reproductive process
Functional Keywords
- carpel , petal , pollen , pollen tube cell
Literature and News
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- A new model involving ethylene, nitric oxide and Fe to explain the regulation of Fe-acquisition genes in Strategy I plants. DOI: 10.1016/j.plaphy.2011.01.019 ; PMID: 21316254
- Single-cell proteomic analysis of glucosinolate-rich S-cells in Arabidopsis thaliana. DOI: 10.1016/j.ymeth.2011.06.005 ; PMID: 21708264
- FERONIA receptor kinase interacts with S-adenosylmethionine synthetase and suppresses S-adenosylmethionine production and ethylene biosynthesis in Arabidopsis. DOI: 10.1111/pce.12570 ; PMID: 25988356
- Calcium-dependent protein kinase CPK28 targets the methionine adenosyltransferases for degradation by the 26S proteasome and affects ethylene biosynthesis and lignin deposition in Arabidopsis. DOI: 10.1111/tpj.13493 ; PMID: 28112445
- METHIONINE ADENOSYLTRANSFERASE4 Mediates DNA and Histone Methylation. DOI: 10.1104/pp.18.00183 ; PMID: 29572390
- S-adenosylmethionine synthases in plants: Structural characterization of type I and II isoenzymes from Arabidopsis thaliana and Medicago truncatula. DOI: 10.1016/j.ijbiomac.2020.02.100 ; PMID: 32057875
Gene Resources
- UniProt: A0A178WKZ1
- EMBL: LUHQ01000001
- AlphaFoldDB: A0A178WKZ1
- EnsemblPlants: AT1G01980.1
- Gramene: AT1G01980.1
- KEGG: ath:AT1G01980
- Orthologous matrix: KCAVEYD
- ExpressionAtlas: AT1G01980
- InterPro: IPR006094, IPR012951, IPR016166
- PANTHER: PTHR32448
- SUPFAM: SSF56176
- PROSITE: PS51387
- Gene3D: 3.30.43.10, 3.30.465.10, 3.40.462.20
- SWISS-MODEL: A0A178WKZ1
Homologs
- Daucus carota DCAR_028259
- Pyrus bretschneideri Pbr042464.1
- Solanum lycopersicum Solyc02g079630.2
Sequences
cDNA Sequence
- >AT1G01980.1
CAAAAAAAAGGGGGAACAAGGGAGTTTCATGTTAAAAAGAAATGAAGCTCTCTTGTTTGGTTTTTCTCATAGTATCGTCTCTTGTTTCGAGTTCTCTTGCCACCGCTCCGCCCAACACATCTATATATGAAAGCTTTCTCCAATGTTTCAGCAATCAAACAGGTGCTCCTCCTGAGAAGTTATGCGACGTCGTTCTGCCTCAAAGCAGTGCCAGCTTCACTCCAACCCTACGTGCCTACATCCGTAACGCTCGTTTCAACACTTCCACGTCCCCCAAACCTCTGCTCGTTATCGCGGCGCGTTCTGAGTGCCACGTCCAGGCCACCGTCCTCTGCACCAAATCTCTCAACTTCCAGCTCAAGACTCGCAGCGGCGGCCATGACTACGACGGCGTTTCCTACATCTCTAACCGCCCTTTCTTCGTCCTCGACATGTCCTATCTCCGTAACATTACCGTCGATATGTCCGACGACGGCGGCTCTGCTTGGGTTGGAGCCGGCGCTACTCTCGGCGAAGTTTATTACAACATTTGGCAGAGCAGCAAAACTCACGGCACTCACGGATTTCCCGCCGGTGTTTGTCCCACAGTAGGCGCTGGAGGTCACATTAGCGGCGGGGGCTACGGCAACATGATCAGAAAATACGGACTTTCCGTGGACTACGTCACGGACGCCAAAATCGTAGACGTGAACGGACGGATTCTCGATCGTAAATCGATGGGAGAGGATTTGTTTTGGGCGATTGGAGGCGGTGGTGGTGCGAGCTTCGGCGTGATCTTATCTTTCAAGATCAAACTCGTGCCTGTTCCTCCGAGGGTGACTGTTTTCAGAGTGGAGAAGACCCTAGTAGAAAACGCACTTGACATGGTCCATAAATGGCAGTTTGTTGCTCCCAAGACCAGCCCGGATCTCTTCATGAGGCTAATGTTGCAGCCAGTGACCCGGAACACGACTCAGACGGTTCGCGCGTCGGTAGTTGCTCTGTTCTTGGGAAAACAGAGCGATCTCATGTCTCTGCTGACCAAGGAGTTCCCCGAGCTTGGTCTGAAGCCGGAGAATTGCACGGAGATGACGTGGATACAGTCGGTGATGTGGTGGGCCAACAACGACAACGCCACGGTGATTAAACCGGAGATCCTGCTGGATCGAAATCCGGATTCGGCGTCTTTCTTGAAAAGAAAATCGGATTACGTGGAGAAAGAGATCAGCAAAGACGGTTTAGATTTCTTGTGTAAGAAGTTGATGGAGGCTGGGAAGCTAGGGCTAGTGTTCAATCCATACGGAGGGAAAATGAGCGAAGTTGCTACGACGGCGACTCCGTTCCCACACAGGAAGAGGCTTTTCAAGGTCCAGCATTCGATGAACTGGAAAGACCCGGGCACTGATGTTGAAAGCAGTTTCATGGAAAAGACGAGAAGCTTCTACAGCTACATGGCTCCTTTCGTGACCAAGAATCCAAGACACACGTATCTCAACTACAGGGATCTTGATATCGGGATCAACAGCCATGGCCCAAACAGTTACAGAGAAGCTGAGGTTTACGGGAGAAAGTATTTCGGAGAGAATTTTGATCGGTTGGTCAAAGTCAAAACAGCCGTGGATCCAGAAAACTTTTTCAGAGATGAACAAAGTATACCTACCTTGCCTACCAAGCCATCCTCGAGTTAGGTTTGGTAGCAAGAGTGGGGAGATCTTCTCTTGCTTTTTTTTTCTTTGGCAAATGACCAAAATAGTTTTAAATCCCAGGCTGCCTTGGGATCATTTTTTTCCTAGCTAATTTATTCAGAACAACCAAGTCAGAAAATTTGACTGCACAAATTGCAAGAAATACAAGAACTGGCATGCATCTATATAAAACAAGATTATACACAACACAACACGTAATTTTCCGTGTTTAGTTTTGAATAAGTCTAGTCTTACAATTGCAATTTGAT
CDS Sequence
- >AT1G01980.1
ATGAAGCTCTCTTGTTTGGTTTTTCTCATAGTATCGTCTCTTGTTTCGAGTTCTCTTGCCACCGCTCCGCCCAACACATCTATATATGAAAGCTTTCTCCAATGTTTCAGCAATCAAACAGGTGCTCCTCCTGAGAAGTTATGCGACGTCGTTCTGCCTCAAAGCAGTGCCAGCTTCACTCCAACCCTACGTGCCTACATCCGTAACGCTCGTTTCAACACTTCCACGTCCCCCAAACCTCTGCTCGTTATCGCGGCGCGTTCTGAGTGCCACGTCCAGGCCACCGTCCTCTGCACCAAATCTCTCAACTTCCAGCTCAAGACTCGCAGCGGCGGCCATGACTACGACGGCGTTTCCTACATCTCTAACCGCCCTTTCTTCGTCCTCGACATGTCCTATCTCCGTAACATTACCGTCGATATGTCCGACGACGGCGGCTCTGCTTGGGTTGGAGCCGGCGCTACTCTCGGCGAAGTTTATTACAACATTTGGCAGAGCAGCAAAACTCACGGCACTCACGGATTTCCCGCCGGTGTTTGTCCCACAGTAGGCGCTGGAGGTCACATTAGCGGCGGGGGCTACGGCAACATGATCAGAAAATACGGACTTTCCGTGGACTACGTCACGGACGCCAAAATCGTAGACGTGAACGGACGGATTCTCGATCGTAAATCGATGGGAGAGGATTTGTTTTGGGCGATTGGAGGCGGTGGTGGTGCGAGCTTCGGCGTGATCTTATCTTTCAAGATCAAACTCGTGCCTGTTCCTCCGAGGGTGACTGTTTTCAGAGTGGAGAAGACCCTAGTAGAAAACGCACTTGACATGGTCCATAAATGGCAGTTTGTTGCTCCCAAGACCAGCCCGGATCTCTTCATGAGGCTAATGTTGCAGCCAGTGACCCGGAACACGACTCAGACGGTTCGCGCGTCGGTAGTTGCTCTGTTCTTGGGAAAACAGAGCGATCTCATGTCTCTGCTGACCAAGGAGTTCCCCGAGCTTGGTCTGAAGCCGGAGAATTGCACGGAGATGACGTGGATACAGTCGGTGATGTGGTGGGCCAACAACGACAACGCCACGGTGATTAAACCGGAGATCCTGCTGGATCGAAATCCGGATTCGGCGTCTTTCTTGAAAAGAAAATCGGATTACGTGGAGAAAGAGATCAGCAAAGACGGTTTAGATTTCTTGTGTAAGAAGTTGATGGAGGCTGGGAAGCTAGGGCTAGTGTTCAATCCATACGGAGGGAAAATGAGCGAAGTTGCTACGACGGCGACTCCGTTCCCACACAGGAAGAGGCTTTTCAAGGTCCAGCATTCGATGAACTGGAAAGACCCGGGCACTGATGTTGAAAGCAGTTTCATGGAAAAGACGAGAAGCTTCTACAGCTACATGGCTCCTTTCGTGACCAAGAATCCAAGACACACGTATCTCAACTACAGGGATCTTGATATCGGGATCAACAGCCATGGCCCAAACAGTTACAGAGAAGCTGAGGTTTACGGGAGAAAGTATTTCGGAGAGAATTTTGATCGGTTGGTCAAAGTCAAAACAGCCGTGGATCCAGAAAACTTTTTCAGAGATGAACAAAGTATACCTACCTTGCCTACCAAGCCATCCTCGAGTTAG
Protein Sequence
- >AT1G01980.1
MKLSCLVFLIVSSLVSSSLATAPPNTSIYESFLQCFSNQTGAPPEKLCDVVLPQSSASFTPTLRAYIRNARFNTSTSPKPLLVIAARSECHVQATVLCTKSLNFQLKTRSGGHDYDGVSYISNRPFFVLDMSYLRNITVDMSDDGGSAWVGAGATLGEVYYNIWQSSKTHGTHGFPAGVCPTVGAGGHISGGGYGNMIRKYGLSVDYVTDAKIVDVNGRILDRKSMGEDLFWAIGGGGGASFGVILSFKIKLVPVPPRVTVFRVEKTLVENALDMVHKWQFVAPKTSPDLFMRLMLQPVTRNTTQTVRASVVALFLGKQSDLMSLLTKEFPELGLKPENCTEMTWIQSVMWWANNDNATVIKPEILLDRNPDSASFLKRKSDYVEKEISKDGLDFLCKKLMEAGKLGLVFNPYGGKMSEVATTATPFPHRKRLFKVQHSMNWKDPGTDVESSFMEKTRSFYSYMAPFVTKNPRHTYLNYRDLDIGINSHGPNSYREAEVYGRKYFGENFDRLVKVKTAVDPENFFRDEQSIPTLPTKPSSS