Gene Details:

  • Gene ID: AT1G01940
  • Gene Symbol: CYP18-1
  • Gene Name: CYCLOPHILIN 18-1
  • Description: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)
  • TAIR Accession: locus:2025492
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0000013  — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
  • PO:0000230  — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
  • PO:0009010  — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
  • PO:0009030  — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
  • PO:0009032  — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
  • PO:0009047  — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
  • PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
  • PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
  • PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

  • GO:0005634  — located in — nucleus
  • GO:0003755  — enables — peptidyl-prolyl cis-trans isomerase activity
  • GO:0034605  — acts upstream of or within — cellular response to heat
  • GO:0030623  — enables — U5 snRNA binding
  • GO:0000398  — acts upstream of or within — mRNA splicing, via spliceosome
  • GO:0005730  — located in — nucleolus
  • GO:0005515  — enables — protein binding
  • GO:0010494  — located in — cytoplasmic stress granule
  • GO:0030620  — enables — U2 snRNA binding
  • GO:0006457  — involved in — protein folding
  • GO:0071013  — part of — catalytic step 2 spliceosome

Literature:

Sequences:

cDNA Sequence
  • >AT1G01940.1
    GATAAACGATTCCGTTTTGTTATTTTCTTAAATGGATCCATAATGTCATTAAAGTGGCCCATATAAGGCCCAATAATACAAGGCGGCGATGCAGAAAGATCTCGAACGAACAAAAGCGCCAAAAGCATCCTAGACGCGACTGAGAAAATAAATATAGAAGAAAGCCTCTCTGCTCGTTTTGCGTTTCCGAGCAACAATGTCGGTAACTTTGCACACGAACCTGGGTGACATCAAGTGCGAAATCTTCTGTGACGAGGTTCCCAAGAGTGCTGAGAACTTTTTGGCGTTGTGTGCTAGTGGCTACTACGATGGTACTATCTTTCATAGAAATATCAAAGGGTTCATGATTCAAGGAGGAGACCCCAAGGGGACCGGAAAAGGAGGAACTAGCATCTGGGGCAAGAAATTCAATGATGAGATCCGAGACTCCCTTAAGCACAATGCAAGAGGGATGCTGTCAATGGCAAACAGCGGTCCAAACACCAACGGAAGCCAGTTCTTCATAACCTATGCAAAACAACCACATCTCAATGGATTATACACCATCTTTGGCAAAGTCATTCATGGCTTCGAAGTGCTTGACATTATGGAAAAGACTCAAACAGGACCAGGAGATAGGCCGCTTGCTGAGATAAGGCTAAACCGTGTGACGATCCACGCCAATCCACTTGCTGGTTAAGTCTAATGTGGCAGAACCGAGCCAAGCCAAAAGTGTTGTTCTCTTTATTTGTTTCGATAGAGCTGACATGTACACTCAGAAACTGAACTAAGACCACTGTTTCACCCAATTAAAAAGTTTGTACTGGAGGATTTACCAATTACTGTCTTCAAAGGTGTTTTGTATTATTTAAAGACAAAAATAATTTTTTTTGCCCAA
CDS Sequence
  • >AT1G01940.1
    ATGTCGGTAACTTTGCACACGAACCTGGGTGACATCAAGTGCGAAATCTTCTGTGACGAGGTTCCCAAGAGTGCTGAGAACTTTTTGGCGTTGTGTGCTAGTGGCTACTACGATGGTACTATCTTTCATAGAAATATCAAAGGGTTCATGATTCAAGGAGGAGACCCCAAGGGGACCGGAAAAGGAGGAACTAGCATCTGGGGCAAGAAATTCAATGATGAGATCCGAGACTCCCTTAAGCACAATGCAAGAGGGATGCTGTCAATGGCAAACAGCGGTCCAAACACCAACGGAAGCCAGTTCTTCATAACCTATGCAAAACAACCACATCTCAATGGATTATACACCATCTTTGGCAAAGTCATTCATGGCTTCGAAGTGCTTGACATTATGGAAAAGACTCAAACAGGACCAGGAGATAGGCCGCTTGCTGAGATAAGGCTAAACCGTGTGACGATCCACGCCAATCCACTTGCTGGTTAA
Protein Sequence
  • >AT1G01940.1
    MSVTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAEIRLNRVTIHANPLAG