Information report for AT1G01900
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009505 — located in — plant-type cell wall
- GO:0031012 — located in — extracellular matrix
- GO:0006508 — involved in — proteolysis
- GO:0005576 — located in — extracellular region
- GO:0004252 — enables — serine-type endopeptidase activity
- GO:0048046 — located in — apoplast
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , guard cell
Literature and News
- Overexpression of spermidine synthase enhances tolerance to multiple environmental stresses and up-regulates the expression of various stress-regulated genes in transgenic Arabidopsis thaliana. DOI: 10.1093/pcp/pch083 ; PMID: 15215506
- GA4 is the active gibberellin in the regulation of LEAFY transcription and Arabidopsis floral initiation. DOI: 10.1105/tpc.106.042317 ; PMID: 16920780
- Regulation of hormone metabolism in Arabidopsis seeds: phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism. DOI: 10.1111/j.1365-313X.2006.02881.x ; PMID: 17010113
- Arabidopsis thaliana plants acclimated to low dose rates of ultraviolet B radiation show specific changes in morphology and gene expression in the absence of stress symptoms. DOI: 10.1111/j.1469-8137.2007.02092.x ; PMID: 17587374
- The MADS-domain transcriptional regulator AGAMOUS-LIKE15 promotes somatic embryo development in Arabidopsis and soybean. DOI: 10.1104/pp.108.115832 ; PMID: 18305206
- The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. DOI: 10.1016/j.ydbio.2007.12.016 ; PMID: 18252252
- Transcriptional factor interaction: a central step in DELLA function. DOI: 10.1016/j.gde.2008.05.004 ; PMID: 18590820
- Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. DOI: 10.1105/tpc.108.058818 ; PMID: 18805991
- Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor. DOI: 10.1104/pp.108.128488 ; PMID: 18829981
- Dynamic landscapes of four histone modifications during deetiolation in Arabidopsis. DOI: 10.1105/tpc.109.066845 ; PMID: 20008096
- Evolutionary analysis of three gibberellin oxidase genes in rice, Arabidopsis, and soybean. DOI: 10.1016/j.gene.2010.10.010 ; PMID: 21056641
- Induction of dormancy in Arabidopsis summer annuals requires parallel regulation of DOG1 and hormone metabolism by low temperature and CBF transcription factors. DOI: 10.1105/tpc.111.087643 ; PMID: 21803937
- A Role for GIBBERELLIN 2-OXIDASE6 and Gibberellins in Regulating Nectar Production. DOI: 10.1016/j.molp.2015.12.019 ; PMID: 26748313
- Comprehensive expression analysis of Arabidopsis GA2-oxidase genes and their functional insights. DOI: 10.1016/j.plantsci.2019.04.023 ; PMID: 31203874
- Regulation of shoot meristem shape by photoperiodic signaling and phytohormones during floral induction of Arabidopsis. DOI: 10.7554/eLife.60661 ; PMID: 33315012
- Conserved and plant-specific histone acetyltransferase complexes cooperate to regulate gene transcription and plant development. DOI: 10.1038/s41477-023-01359-3 ; PMID: 36879016
Gene Resources
- UniProt: A0A178W900
- EMBL: LUHQ01000001
- AlphaFoldDB: A0A178W900
- EnsemblPlants: AT1G01900.1
- Gramene: AT1G01900.1
- KEGG: ath:AT1G01900
- Orthologous matrix: IGLWNKT
- ExpressionAtlas: AT1G01900
- InterPro: IPR000209, IPR003137, IPR010259
- PANTHER: PTHR10795
- SUPFAM: SSF52743
- PROSITE: PS00136, PS00138, PS51892
- Gene3D: 2.60.40.2310, 3.30.70.80, 3.40.50.200
- SWISS-MODEL: A0A178W900
- Conserved Domain Database: cd02120, cd04852
Homologs
- Actinidia chinensis Achn120161
- Daucus carota DCAR_020211
- Fragaria vesca mrna20108.1-v1.0-hybrid
- Gossypium hirsutum GhARF3
- Oryza sativa OsSDD1, OsSP1, RSP1, OsSub42;OsSP2, SLP1, Hwi2
- Solanum tuberosum Soltu.DM.02G015470
Sequences
cDNA Sequence
- >AT1G01900.1
AGTTACAAAACATATCATATATTTCATTTAACCTTTTCGTATATATTACTCTTTCTAGTCACATTTTCCTCAGCTCCCACTGCTCACAGTATTCACACGTCACATATATATATCTTTTATGTGTTATATACCCACAGAGACCAGTCCTAAGAATCACATGTAGATGCATCGCTTTCTTTTAATGCTCTTATTTCCCTTTAGCGACAACCGTCCCATGATGTTCTTCAGATCATTCATCGTTTTCTTCTTTCTTATCTTTTTCGCATCAAATGTTTCTTCCCGTAAACAAACCTACGTGATCCACACTGTCACAACCAGTACCAAACACATCGTAACTTCACTTTTTAATTCACTCCAAACAGAGAATATCAACGACGATGATTTTTCTCTCCCGGAGATTCACTATATTTACGAGAATGCCATGTCTGGTTTCTCCGCGACTCTCACCGACGACCAGCTTGATACGGTGAAGAACACAAAAGGGTTTATCTCTGCTTATCCAGACGAGCTCTTATCTCTACACACGACATATTCTCACGAGTTTCTTGGTCTCGAATTCGGGATCGGTCTTTGGAACGAGACGAGCCTATCTTCGGACGTCATCATCGGCCTTGTGGACACTGGGATCTCCCCGGAGCACGTGAGCTTCCGAGACACGCACATGACTCCTGTACCGTCTAGATGGAGAGGTTCGTGCGATGAAGGCACAAACTTCTCATCTTCGGAGTGTAACAAGAAGATCATTGGAGCTAGCGCATTTTACAAAGGCTACGAATCAATCGTTGGAAAAATCAATGAAACCACTGATTTCAGGTCGACTCGAGACGCACAAGGACATGGGACGCATACAGCCTCGACTGCTGCCGGAGACATTGTCCCCAAAGCGAATTATTTCGGGCAAGCTAAAGGTTTAGCTTCAGGGATGAGGTTTACTTCGAGGATCGCTGCTTACAAAGCTTGTTGGGCTCTAGGATGTGCCAGCACCGACGTCATAGCAGCCATTGACCGAGCCATTTTAGACGGTGTAGATGTGATTTCACTCTCGCTAGGTGGATCATCACGCCCGTTTTACGTGGATCCTATCGCGATAGCCGGGTTCGGAGCGATGCAGAAGAACATTTTCGTGTCTTGCTCTGCGGGTAATTCAGGACCAACTGCATCCACAGTGAGTAATGGAGCTCCGTGGTTGATGACTGTCGCTGCCAGTTATACGGATAGGACGTTTCCGGCGATTGTCCGGATCGGGAACCGTAAAAGCTTGGTCGGATCATCCTTGTATAAAGGAAAAAGCTTAAAGAATCTGCCTTTGGCGTTTAACAGAACAGCTGGAGAAGAAAGCGGAGCCGTGTTCTGTATCCGGGACTCGCTCAAGAGAGAACTCGTCGAGGGTAAAATCGTCATTTGCTTAAGAGGAGCCAGCGGCAGAACGGCCAAAGGAGAAGAGGTGAAACGGAGCGGAGGAGCAGCGATGCTTCTTGTGAGCACAGAGGCGGAAGGAGAGGAGCTTCTTGCTGATCCTCACGTTTTACCGGCCGTTTCACTTGGATTTTCCGACGGTAAAACCTTACTGAATTACCTCGCCGGAGCAGCAAACGCCACCGCCTCCGTTCGATTCAGAGGAACCGCGTATGGTGCAACCGCCCCGATGGTAGCCGCGTTCTCATCCAGAGGACCTAGCGTCGCGGGACCGGAAATAGCTAAACCGGACATTGCGGCTCCCGGTCTGAACATCCTCGCCGGATGGTCACCGTTCAGCAGCCCTAGCCTCCTCAGATCCGATCCAAGACGCGTCCAATTCAATATCATCTCGGGAACCTCCATGGCTTGTCCTCACATCAGCGGAATCGCCGCTCTAATCAAGTCCGTTCACGGGGACTGGTCACCGGCGATGATCAAATCAGCAATCATGACGACGGCGAGGATCACTGACAATAGGAACCGACCGATCGGAGATAGAGGCGCCGCGGGAGCTGAATCGGCGGCCACAGCGTTTGCGTTTGGAGCGGGAAACGTGGATCCCACGCGAGCGGTAGATCCCGGGCTGGTATACGATACCTCCACCGTCGATTATCTCAACTACTTGTGCAGCTTGAACTACACGAGTGAGAGAATACTCTTGTTCTCCGGCACTAACTACACGTGTGCTAGTAACGCCGTCGTTTTGAGTCCCGGTGATTTGAACTATCCCTCGTTCGCGGTCAACCTCGTTAATGGCGCGAATTTGAAAACGGTGAGATATAAGAGGACTGTGACTAACGTTGGGTCACCGACTTGTGAGTATATGGTGCACGTTGAGGAACCAAAAGGTGTGAAGGTGAGAGTTGAACCAAAGGTGCTCAAGTTCCAGAAGGCCAGAGAGAGGTTGAGTTATACGGTGACGTATGATGCAGAAGCTTCGAGAAATTCGTCTTCGTCTTCCTTTGGAGTTTTGGTTTGGATATGTGACAAATACAACGTCAGAAGCCCAATCGCCGTGACGTGGGAATAAATTTCGCATCTATTGATTGCCATTTTCATATTTATTATATACCAAAGAAACTTATTGAACAAAAGCTTACCCTAAACTTGTAAGAATTTGTCAATAAATCAAAACATCTCTTATTTACT
CDS Sequence
- >AT1G01900.1
ATGCATCGCTTTCTTTTAATGCTCTTATTTCCCTTTAGCGACAACCGTCCCATGATGTTCTTCAGATCATTCATCGTTTTCTTCTTTCTTATCTTTTTCGCATCAAATGTTTCTTCCCGTAAACAAACCTACGTGATCCACACTGTCACAACCAGTACCAAACACATCGTAACTTCACTTTTTAATTCACTCCAAACAGAGAATATCAACGACGATGATTTTTCTCTCCCGGAGATTCACTATATTTACGAGAATGCCATGTCTGGTTTCTCCGCGACTCTCACCGACGACCAGCTTGATACGGTGAAGAACACAAAAGGGTTTATCTCTGCTTATCCAGACGAGCTCTTATCTCTACACACGACATATTCTCACGAGTTTCTTGGTCTCGAATTCGGGATCGGTCTTTGGAACGAGACGAGCCTATCTTCGGACGTCATCATCGGCCTTGTGGACACTGGGATCTCCCCGGAGCACGTGAGCTTCCGAGACACGCACATGACTCCTGTACCGTCTAGATGGAGAGGTTCGTGCGATGAAGGCACAAACTTCTCATCTTCGGAGTGTAACAAGAAGATCATTGGAGCTAGCGCATTTTACAAAGGCTACGAATCAATCGTTGGAAAAATCAATGAAACCACTGATTTCAGGTCGACTCGAGACGCACAAGGACATGGGACGCATACAGCCTCGACTGCTGCCGGAGACATTGTCCCCAAAGCGAATTATTTCGGGCAAGCTAAAGGTTTAGCTTCAGGGATGAGGTTTACTTCGAGGATCGCTGCTTACAAAGCTTGTTGGGCTCTAGGATGTGCCAGCACCGACGTCATAGCAGCCATTGACCGAGCCATTTTAGACGGTGTAGATGTGATTTCACTCTCGCTAGGTGGATCATCACGCCCGTTTTACGTGGATCCTATCGCGATAGCCGGGTTCGGAGCGATGCAGAAGAACATTTTCGTGTCTTGCTCTGCGGGTAATTCAGGACCAACTGCATCCACAGTGAGTAATGGAGCTCCGTGGTTGATGACTGTCGCTGCCAGTTATACGGATAGGACGTTTCCGGCGATTGTCCGGATCGGGAACCGTAAAAGCTTGGTCGGATCATCCTTGTATAAAGGAAAAAGCTTAAAGAATCTGCCTTTGGCGTTTAACAGAACAGCTGGAGAAGAAAGCGGAGCCGTGTTCTGTATCCGGGACTCGCTCAAGAGAGAACTCGTCGAGGGTAAAATCGTCATTTGCTTAAGAGGAGCCAGCGGCAGAACGGCCAAAGGAGAAGAGGTGAAACGGAGCGGAGGAGCAGCGATGCTTCTTGTGAGCACAGAGGCGGAAGGAGAGGAGCTTCTTGCTGATCCTCACGTTTTACCGGCCGTTTCACTTGGATTTTCCGACGGTAAAACCTTACTGAATTACCTCGCCGGAGCAGCAAACGCCACCGCCTCCGTTCGATTCAGAGGAACCGCGTATGGTGCAACCGCCCCGATGGTAGCCGCGTTCTCATCCAGAGGACCTAGCGTCGCGGGACCGGAAATAGCTAAACCGGACATTGCGGCTCCCGGTCTGAACATCCTCGCCGGATGGTCACCGTTCAGCAGCCCTAGCCTCCTCAGATCCGATCCAAGACGCGTCCAATTCAATATCATCTCGGGAACCTCCATGGCTTGTCCTCACATCAGCGGAATCGCCGCTCTAATCAAGTCCGTTCACGGGGACTGGTCACCGGCGATGATCAAATCAGCAATCATGACGACGGCGAGGATCACTGACAATAGGAACCGACCGATCGGAGATAGAGGCGCCGCGGGAGCTGAATCGGCGGCCACAGCGTTTGCGTTTGGAGCGGGAAACGTGGATCCCACGCGAGCGGTAGATCCCGGGCTGGTATACGATACCTCCACCGTCGATTATCTCAACTACTTGTGCAGCTTGAACTACACGAGTGAGAGAATACTCTTGTTCTCCGGCACTAACTACACGTGTGCTAGTAACGCCGTCGTTTTGAGTCCCGGTGATTTGAACTATCCCTCGTTCGCGGTCAACCTCGTTAATGGCGCGAATTTGAAAACGGTGAGATATAAGAGGACTGTGACTAACGTTGGGTCACCGACTTGTGAGTATATGGTGCACGTTGAGGAACCAAAAGGTGTGAAGGTGAGAGTTGAACCAAAGGTGCTCAAGTTCCAGAAGGCCAGAGAGAGGTTGAGTTATACGGTGACGTATGATGCAGAAGCTTCGAGAAATTCGTCTTCGTCTTCCTTTGGAGTTTTGGTTTGGATATGTGACAAATACAACGTCAGAAGCCCAATCGCCGTGACGTGGGAATAA
Protein Sequence
- >AT1G01900.1
MHRFLLMLLFPFSDNRPMMFFRSFIVFFFLIFFASNVSSRKQTYVIHTVTTSTKHIVTSLFNSLQTENINDDDFSLPEIHYIYENAMSGFSATLTDDQLDTVKNTKGFISAYPDELLSLHTTYSHEFLGLEFGIGLWNETSLSSDVIIGLVDTGISPEHVSFRDTHMTPVPSRWRGSCDEGTNFSSSECNKKIIGASAFYKGYESIVGKINETTDFRSTRDAQGHGTHTASTAAGDIVPKANYFGQAKGLASGMRFTSRIAAYKACWALGCASTDVIAAIDRAILDGVDVISLSLGGSSRPFYVDPIAIAGFGAMQKNIFVSCSAGNSGPTASTVSNGAPWLMTVAASYTDRTFPAIVRIGNRKSLVGSSLYKGKSLKNLPLAFNRTAGEESGAVFCIRDSLKRELVEGKIVICLRGASGRTAKGEEVKRSGGAAMLLVSTEAEGEELLADPHVLPAVSLGFSDGKTLLNYLAGAANATASVRFRGTAYGATAPMVAAFSSRGPSVAGPEIAKPDIAAPGLNILAGWSPFSSPSLLRSDPRRVQFNIISGTSMACPHISGIAALIKSVHGDWSPAMIKSAIMTTARITDNRNRPIGDRGAAGAESAATAFAFGAGNVDPTRAVDPGLVYDTSTVDYLNYLCSLNYTSERILLFSGTNYTCASNAVVLSPGDLNYPSFAVNLVNGANLKTVRYKRTVTNVGSPTCEYMVHVEEPKGVKVRVEPKVLKFQKARERLSYTVTYDAEASRNSSSSSFGVLVWICDKYNVRSPIAVTWE