Gene Details:

• Gene ID: AT1G01880
• Gene Symbol: AtGEN1, GEN1
• Gene Name: ortholog of HsGEN1
• Description: 5-3 exonuclease family protein;(source:Araport11)
• TAIR Accession: locus:2025447
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT1G01880.1     AT1G01880.2     AT1G01880.4     AT1G01880.3

Plant Ontology Annotations:

• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0005634  — located in — nucleus
• GO:0017108  — enables — 5-flap endonuclease activity GO:0017108 8073 F catalytic activity IBA none PANTHER:PTN000118612|PomBase:SPAC3G6.06c|TAIR:locus:2099463|FB:FBgn0263831|UniProtKB:P39748|SGD:S000005559|SGD:S000001596|TAIR:locus:2025447|UniProtKB:Q17RS7 Communication:501741973 2023-06-07 AT1G01880 locus:2025447 AT1G01880 enables 5-flap endonuclease activity
• GO:0003677  — enables — DNA binding
• GO:0017108  — enables — 5-flap endonuclease activity GO:0017108 8073 F catalytic activity IDA none Publication:501760496|PMID:25037209 2021-04-01 AT1G01880 gene:2025446 AT1G01880.1 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31
• GO:0008821  — enables — crossover junction DNA endonuclease activity
• GO:0009555  — involved in — pollen development
• GO:0090305  — acts upstream of or within — nucleic acid phosphodiester bond hydrolysis
• GO:0009650  — involved in — UV protection
• GO:0006259  — acts upstream of or within — DNA metabolic process

Function-related keywords:

• guard cell

Literature:

• Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance.   DOI:  10.1046/j.1365-313x.2003.01867.x ;  PMID:  14535883
• Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7.   DOI:  10.1111/j.1365-313X.2006.02725.x ;  PMID:  16553894
• An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease.   DOI:  10.1111/j.1365-3040.2011.02390.x ;  PMID:  21711359
• Mitochondrial GPAT-derived LPA controls auxin-dependent embryonic and postembryonic development.   DOI:  10.1073/pnas.2212881119 ;  PMID:  36454754

Sequences: