Information report for AT1G01780
Gene Details
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Functional Descriptions
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000230 — inflorescence meristem — meristema de la inflorescencia (Spanish, exact), 花序分裂組織 (Japanese, exact)
- PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0051017 — involved in — actin filament bundle assembly
- GO:0005886 — is active in — plasma membrane
- GO:0051015 — enables — actin filament binding
- GO:0051017 — acts upstream of or within — actin filament bundle assembly
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0015629 — colocalizes with — actin cytoskeleton
- GO:0005737 — located in — cytoplasm
Functional Keywords
- cauline leaf , inflorescence meristem , seed , carpel , petal , stem , pollen , pollen tube cell , guard cell
Literature and News
- HFR1, a phytochrome A-signalling component, acts in a separate pathway from HY5, downstream of COP1 in Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.2002.01326.x ; PMID: 12061902
- Analysis of far-red light-regulated genome expression profiles of phytochrome A pathway mutants in Arabidopsis. DOI: 10.1046/j.1365-313x.2002.01462.x ; PMID: 12472688
- HFR1 encodes an atypical bHLH protein that acts in phytochrome A signal transduction. DOI: NA ; PMID: 10995393
- A Link between circadian-controlled bHLH factors and the APRR1/TOC1 quintet in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg078 ; PMID: 12826627
- Overexpression of a mutant basic helix-loop-helix protein HFR1, HFR1-deltaN105, activates a branch pathway of light signaling in Arabidopsis. DOI: 10.1104/pp.103.029751 ; PMID: 14645731
- Light regulates COP1-mediated degradation of HFR1, a transcription factor essential for light signaling in Arabidopsis. DOI: 10.1105/tpc.104.030205 ; PMID: 15705947
- HFR1 is targeted by COP1 E3 ligase for post-translational proteolysis during phytochrome A signaling. DOI: 10.1101/gad.1247205 ; PMID: 15741320
- Repression of light signaling by Arabidopsis SPA1 involves post-translational regulation of HFR1 protein accumulation. DOI: 10.1111/j.1365-313X.2005.02433.x ; PMID: 15960622
- Arabidopsis SHORT HYPOCOTYL UNDER BLUE1 contains SPX and EXS domains and acts in cryptochrome signaling. DOI: 10.1105/tpc.105.037879 ; PMID: 16500988
- The central coiled-coil domain and carboxyl-terminal WD-repeat domain of Arabidopsis SPA1 are responsible for mediating repression of light signaling. DOI: 10.1111/j.1365-313X.2006.02811.x ; PMID: 16813572
Gene Resources
- UniProt: A0A178WGL7
- EMBL: CACRSJ010000104, CACSHJ010000087, LUHQ01000001
- AlphaFoldDB: A0A178WGL7
- EnsemblPlants: AT1G01780.1
- Gramene: AT1G01780.1
- KEGG: ath:AT1G01780
- Orthologous matrix: SKKEMAF
- ExpressionAtlas: AT1G01780
- InterPro: IPR001781
- PANTHER: PTHR24206
- SUPFAM: SSF57716
- PROSITE: PS00478, PS50023
- Gene3D: 2.10.110.10
- OrthoDB: A0A178WGL7
- Conserved Domain Database: cd09440
Sequences
cDNA Sequence
- >AT1G01780.1
TCTGAGGTAAAGGTTTCCTTCTTTAACTAATTCCTCAGATGACCTCTTGATTTGTTGGAAAAAAAATTAAAAAATCTGTTTCATACAGGATCTTGGAGAAGGAAGGAAACAACAACAACCAAAAAAAAACCAAAAAAAAAAAAGATAAAACAAAAAAAATGTCTTTCACAGGAACTCTCGACAAATGCAATGTTTGTGATAAGACAGTCTATGTGGTGGACATGTTGTCCATTGAAGGAATGCCTTACCACAAGTCTTGCTTCAGGTGTACCCATTGCAAAGGAACCCTTCAGATGAGCAACTATTCCTCCATGGACGGAGTTTTGTACTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGCAATTTCAGCAAAAACTTTCAACCAGGAAAAACTGAGAAGCCAGAGCTGACTAGGACTCCCAGCAAGATATCTTCCATCTTCTGTGGAACACAAGACAAGTGTGCCGCTTGCGAAAAAACTGTTTACCCTCTTGAAAAGATACAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCCGGTGCGCTCACGGTGGGTGTACGCTGACTCACTCCTCCTACGCCTCCTTAGATAGCGTTCTCTATTGCCGACATCACTTTAACCAACTCTTCATGGAGAAAGGAAACTACGCTCACGTCCTCCAAGCCGCCAATCACCGTCGCACAGCCTCAGGCAACACTCTTCCACCGGAACCTACCGAAGACGTCGCCGTGGAGGCCAAGGAAGAGAATGGCGTTTCAGAGTCTTGAATATCTCTTACATGAGTGTTTTTGAGTGAATGATTGAATGAATGTTGTTGCGGGGGAAAGATTTGATTTCATTTGTAATGAGTTGTTTCCATATGAAGACATGATTTTTTTTGTTATTTTTTTAATTCATTCGTTATACATTTATTATTACACACGAAAAAAA
CDS Sequence
- >AT1G01780.1
ATGTCTTTCACAGGAACTCTCGACAAATGCAATGTTTGTGATAAGACAGTCTATGTGGTGGACATGTTGTCCATTGAAGGAATGCCTTACCACAAGTCTTGCTTCAGGTGTACCCATTGCAAAGGAACCCTTCAGATGAGCAACTATTCCTCCATGGACGGAGTTTTGTACTGCAAGACTCATTTTGAGCAACTCTTCAAGGAATCTGGCAATTTCAGCAAAAACTTTCAACCAGGAAAAACTGAGAAGCCAGAGCTGACTAGGACTCCCAGCAAGATATCTTCCATCTTCTGTGGAACACAAGACAAGTGTGCCGCTTGCGAAAAAACTGTTTACCCTCTTGAAAAGATACAAATGGAAGGAGAATGCTTCCACAAGACATGTTTCCGGTGCGCTCACGGTGGGTGTACGCTGACTCACTCCTCCTACGCCTCCTTAGATAGCGTTCTCTATTGCCGACATCACTTTAACCAACTCTTCATGGAGAAAGGAAACTACGCTCACGTCCTCCAAGCCGCCAATCACCGTCGCACAGCCTCAGGCAACACTCTTCCACCGGAACCTACCGAAGACGTCGCCGTGGAGGCCAAGGAAGAGAATGGCGTTTCAGAGTCTTGA
Protein Sequence
- >AT1G01780.1
MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTHFEQLFKESGNFSKNFQPGKTEKPELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRRTASGNTLPPEPTEDVAVEAKEENGVSES