Gene Details:
- Gene ID: AT1G01660
- Gene Symbol: PUB55
- Gene Name:
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2198165
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0005737 — located in — cytoplasm
- GO:0010015 — acts upstream of or within — root morphogenesis
- GO:0009826 — acts upstream of or within — unidimensional cell growth
- GO:0090558 — acts upstream of or within — plant epidermis development
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0071695 — acts upstream of or within — anatomical structure maturation
Literature:
- AtSERPIN1 is an inhibitor of the metacaspase AtMC1-mediated cell death and autocatalytic processing in planta. DOI: 10.1111/nph.14446 ; PMID: 28157265
- AtMC1 Associates With LSM4 to Regulate Plant Immunity Through Modulating Pre-mRNA Splicing. DOI: 10.1094/MPMI-07-21-0197-R ; PMID: 34515495
- Stress response proteins NRP1 and NRP2 are pro-survival factors that inhibit cell death during ER stress. DOI: 10.1093/plphys/kiab335 ; PMID: 34618053
Sequences:
cDNA Sequence
- >AT1G01660.1
ATGGCGGAACTCATGGCCATGGGCAATGATGTTGTTCATGTTGCAGTGAAGAGTGATGTCAGAGAGAGCAGATCAACTCTTCTTTGGGCTTTGAGGAACCTCGGGGCTAAGAAAGTCTGCATCCTCCATGTTTATCAGCCAAAAACAGCTTCTCCGGCTGCTCGCAAGCTTGAAGAATTGGAGGCTATCATGTACGAGACATTACATGATTATTTTGATTTTTGTCAACAAGAAGGGGTGAATGAGGACGATATTTACATATCATGTATAGAGATGAACGATGTGAAGCAGGGGATACTAGAACTCATCCATGAGAGCAAAATCAAGAAGCTCGTCATGGGAGCTGCATCAGATCATCATTATTCAGAGAAGATGTTCGATCTCAAATCAAGAAAGGCAAAGTATGTTTACCAACACGCGCCCAGCTCGTGCGAGGTTATGTTTATGTGTGATGGACATCTCATCTACACAAAGGAAGCCAATCTTGAAGACTGTATGGGTGAAACAGAATCCGAAGCTGGACAATCCAAACCGAAGCTCTATTCCTCTGCTTCACCGAAATGCTCTGCAGAATTAGTCTCTGCAATTGTAGCTTACATTGACACAAGGAGAGACAGAGATATGTTGGAGCCAAATGCATCAGAGGATCAATCTGAAAGCGACAGGAATGATCAACTGTATAGACAGCTTAAGCAAGCACTTATGGAAGTTGAGGAATCGAAAAGGGAAGCTTACGAAGAATGTGTCAGGCGGTTTAAAGCTGAAAATACAGCCGTTGAGGCCATTCGCAGTGCAAGAGAGTACGAGGCCATGTACAACGAAGAGGCGAAGCTAAGGAAAGAAGGTAAAGAAGCATTAGCGAAGCAGAGGAAAATGGTGGAGAAGACTAAACAAGAGAGGGACGACGCGCTAATCATCATTCTAAATGGAAGGAAGCTATACAATGAGGAACTGAGACGCAGAGTTGAAGCTGAAGAGATGTTGGGGAAAGAGAAAGAAGAACACGAGAGAACTAAGAAGGAGATCGAAGAAGTGCGAGCCATTGTTCAGGATGGTACTCTGTACAACGAGCAGCTGAGACATAGGAAAGAGATGGAGGAATCTATGAAGAGACAAGAGGAAGAGCTTGAGAAGACAAAGAAGGAGAAGGAAGAAGCGTGCATGATAAGCAAGAACTTGATGCAGCTATATGAAGACGAGGTGAGGCAGAGGAAAGAGGCAGAGGAGTTGGTGAAGAGAAGAAGAGAGGAGCTAGAGAAAGTGAAGAAGGAGAAGGAAGAAGCTTGCTCTGTAGGACAAAACTTCATGAGGTTGTATGAAGAAGAAGCAAGACGTAGAAAAGGAACAGAGGAAGAACTCAGCAAGGTGGCGGCTGAGAAAGACGCAGCGAGCTCAGTCTGTTCGGAGATTCTATTACTCCTTCAGAGTTACACTCGTCGCCATGGAACTCCTTCTGGATTCTCCGATGAGGATTCCGTTACACGCCAGCCTCCCTCATATTTCATATGTCCTATCTCACAGGAAGTAATGCGAGAGCCTCGTGTTGCAGCCGATGGTTTCACCTATGAAGCTGAATCTTTAAGAGAATGGCTCGATAATGGTCACGAGACCTCACCAATGACAAACCTGAAGCTCGCCCACAACAACCTTGTCCCGAATCACGCCCTTCGTTCCGCGATTCAGGAGTGGCTACAACGAAACTCTTGA - >AT1G01660.2
ATGGCGGAACTCATGGCCATGGGCAATGATGTTGTTCATGTTGCAGTGAAGAGTGATGTCAGAGAGAGCAGATCAACTCTTCTTTGGGCTTTGAGGAACCTCGGGGCTAAGAAAGTCTGCATCCTCCATGTTTATCAGCCAAAAACAGCTTCTCCGGCTGCTCGCAAGCTTGAAGAATTGGAGGCTATCATGTACGAGACATTACATGATTATTTTGATTTTTGTCAACAAGAAGGGGTGAATGAGGACGATATTTACATATCATGTATAGAGATGAACGATGTGAAGCAGGGGATACTAGAACTCATCCATGAGAGCAAAATCAAGAAGCTCGTCATGGGAGCTGCATCAGATCATCATTATTCAGAGAAGATGTTCGATCTCAAATCAAGAAAGGCAAAGTATGTTTACCAACACGCGCCCAGCTCGTGCGAGGTTATGTTTATGTGTGATGGACATCTCATCTACACAAAGGAAGCCAATCTTGAAGACTGTATGGGTGAAACAGAATCCGAAGCTGGACAATCCAAACCGAAGCTCTATTCCTCTGCTTCACCGAAATGCTCTGCAGAATTAGTCTCTGCAATTGTAGCTTACATTGACACAAGGAGAGACAGAGATATGTTGGAGCCAAATGCATCAGAGGATCAATCTGAAAGCGACAGGAATGATCAACTGTATAGACAGCTTAAGCAAGCACTTATGGAAGTTGAGGAATCGAAAAGGGAAGCTTACGAAGAATGTGTCAGGCGGTTTAAAGCTGAAAATACAGCCGTTGAGGCCATTCGCAGTGCAAGAGAGTACGAGGCCATGTACAACGAAGAGGCGAAGCTAAGGAAAGAAGGTAAAGAAGCATTAGCGAAGCAGAGGAAAATGGTGGAGAAGACTAAACAAGAGAGGGACGACGCGCTAATCATCATTCTAAATGGAAGGAAGCTATACAATGAGGAACTGAGACGCAGAGTTGAAGCTGAAGAGATGTTGGGGAAAGAGAAAGAAGAACACGAGAGAACTAAGAAGGAGATCGAAGAAGTGCGAGCCATTGTTCAGGATGGTACTCTGTACAACGAGCAGCTGAGACATAGGAAAGAGATGGAGGAATCTATGAAGAGACAAGAGGAAGAGCTTGAGAAGACAAAGAAGGAGAAGGAAGAAGCGTGCATGATAAGCAAGAACTTGATGCAGCTATATGAAGACGAGGTGAGGCAGAGGAAAGAGGCAGAGGAGTTGGTGAAGAGAAGAAGAGAGGAGCTAGAGAAAGTGAAGAAGGAGAAGGAAGAAGCTTGCTCTGTAGGACAAAACTTCATGAGGTTGTATGAAGAAGAAGCAAGACGTAGAAAAGGAACAGAGGAAGAACTCAGCAAGGTGGCGGCTGAGAAAGACGCAGCGAGCTCAGTCTGTTCGGAGATTCTATTACTCCTTCAGAGTTACACTCGTCGCCATGGAACTCCTTCTGGATTCTCCGATGAGGATTCCGTTACACGCCAGCCTCCCTCATATTTCATATGTCCTATCTCACAGGAAGTAATGCGAGAGCCTCGTGTTGCAGCCGATGGTTTCACCTATGAAGCTGAATCTTTAAGAGAATGGCTCGATAATGGTCACGAGACCTCACCAATGACAAACCTGAAGCTCGCCCACAACAACCTTGTCCCGAATCACGCCCTTCGTTCCGCGATTCAGGAGTGGCTACAACGAAACTCTTGA
CDS Sequence
- >AT1G01660.1
ATGGCGGAACTCATGGCCATGGGCAATGATGTTGTTCATGTTGCAGTGAAGAGTGATGTCAGAGAGAGCAGATCAACTCTTCTTTGGGCTTTGAGGAACCTCGGGGCTAAGAAAGTCTGCATCCTCCATGTTTATCAGCCAAAAACAGCTTCTCCGGCTGCTCGCAAGCTTGAAGAATTGGAGGCTATCATGTACGAGACATTACATGATTATTTTGATTTTTGTCAACAAGAAGGGGTGAATGAGGACGATATTTACATATCATGTATAGAGATGAACGATGTGAAGCAGGGGATACTAGAACTCATCCATGAGAGCAAAATCAAGAAGCTCGTCATGGGAGCTGCATCAGATCATCATTATTCAGAGAAGATGTTCGATCTCAAATCAAGAAAGGCAAAGTATGTTTACCAACACGCGCCCAGCTCGTGCGAGGTTATGTTTATGTGTGATGGACATCTCATCTACACAAAGGAAGCCAATCTTGAAGACTGTATGGGTGAAACAGAATCCGAAGCTGGACAATCCAAACCGAAGCTCTATTCCTCTGCTTCACCGAAATGCTCTGCAGAATTAGTCTCTGCAATTGTAGCTTACATTGACACAAGGAGAGACAGAGATATGTTGGAGCCAAATGCATCAGAGGATCAATCTGAAAGCGACAGGAATGATCAACTGTATAGACAGCTTAAGCAAGCACTTATGGAAGTTGAGGAATCGAAAAGGGAAGCTTACGAAGAATGTGTCAGGCGGTTTAAAGCTGAAAATACAGCCGTTGAGGCCATTCGCAGTGCAAGAGAGTACGAGGCCATGTACAACGAAGAGGCGAAGCTAAGGAAAGAAGGTAAAGAAGCATTAGCGAAGCAGAGGAAAATGGTGGAGAAGACTAAACAAGAGAGGGACGACGCGCTAATCATCATTCTAAATGGAAGGAAGCTATACAATGAGGAACTGAGACGCAGAGTTGAAGCTGAAGAGATGTTGGGGAAAGAGAAAGAAGAACACGAGAGAACTAAGAAGGAGATCGAAGAAGTGCGAGCCATTGTTCAGGATGGTACTCTGTACAACGAGCAGCTGAGACATAGGAAAGAGATGGAGGAATCTATGAAGAGACAAGAGGAAGAGCTTGAGAAGACAAAGAAGGAGAAGGAAGAAGCGTGCATGATAAGCAAGAACTTGATGCAGCTATATGAAGACGAGGTGAGGCAGAGGAAAGAGGCAGAGGAGTTGGTGAAGAGAAGAAGAGAGGAGCTAGAGAAAGTGAAGAAGGAGAAGGAAGAAGCTTGCTCTGTAGGACAAAACTTCATGAGGTTGTATGAAGAAGAAGCAAGACGTAGAAAAGGAACAGAGGAAGAACTCAGCAAGGTGGCGGCTGAGAAAGACGCAGCGAGCTCAGTCTGTTCGGAGATTCTATTACTCCTTCAGAGTTACACTCGTCGCCATGGAACTCCTTCTGGATTCTCCGATGAGGATTCCGTTACACGCCAGCCTCCCTCATATTTCATATGTCCTATCTCACAGGAAGTAATGCGAGAGCCTCGTGTTGCAGCCGATGGTTTCACCTATGAAGCTGAATCTTTAAGAGAATGGCTCGATAATGGTCACGAGACCTCACCAATGACAAACCTGAAGCTCGCCCACAACAACCTTGTCCCGAATCACGCCCTTCGTTCCGCGATTCAGGAGTGGCTACAACGAAACTCTTGA - >AT1G01660.2
ATGGCGGAACTCATGGCCATGGGCAATGATGTTGTTCATGTTGCAGTGAAGAGTGATGTCAGAGAGAGCAGATCAACTCTTCTTTGGGCTTTGAGGAACCTCGGGGCTAAGAAAGTCTGCATCCTCCATGTTTATCAGCCAAAAACAGCTTCTCCGGCTGCTCGCAAGCTTGAAGAATTGGAGGCTATCATGTACGAGACATTACATGATTATTTTGATTTTTGTCAACAAGAAGGGGTGAATGAGGACGATATTTACATATCATGTATAGAGATGAACGATGTGAAGCAGGGGATACTAGAACTCATCCATGAGAGCAAAATCAAGAAGCTCGTCATGGGAGCTGCATCAGATCATCATTATTCAGAGAAGATGTTCGATCTCAAATCAAGAAAGGCAAAGTATGTTTACCAACACGCGCCCAGCTCGTGCGAGGTTATGTTTATGTGTGATGGACATCTCATCTACACAAAGGAAGCCAATCTTGAAGACTGTATGGGTGAAACAGAATCCGAAGCTGGACAATCCAAACCGAAGCTCTATTCCTCTGCTTCACCGAAATGCTCTGCAGAATTAGTCTCTGCAATTGTAGCTTACATTGACACAAGGAGAGACAGAGATATGTTGGAGCCAAATGCATCAGAGGATCAATCTGAAAGCGACAGGAATGATCAACTGTATAGACAGCTTAAGCAAGCACTTATGGAAGTTGAGGAATCGAAAAGGGAAGCTTACGAAGAATGTGTCAGGCGGTTTAAAGCTGAAAATACAGCCGTTGAGGCCATTCGCAGTGCAAGAGAGTACGAGGCCATGTACAACGAAGAGGCGAAGCTAAGGAAAGAAGGTAAAGAAGCATTAGCGAAGCAGAGGAAAATGGTGGAGAAGACTAAACAAGAGAGGGACGACGCGCTAATCATCATTCTAAATGGAAGGAAGCTATACAATGAGGAACTGAGACGCAGAGTTGAAGCTGAAGAGATGTTGGGGAAAGAGAAAGAAGAACACGAGAGAACTAAGAAGGAGATCGAAGAAGTGCGAGCCATTGTTCAGGATGGTACTCTGTACAACGAGCAGCTGAGACATAGGAAAGAGATGGAGGAATCTATGAAGAGACAAGAGGAAGAGCTTGAGAAGACAAAGAAGGAGAAGGAAGAAGCGTGCATGATAAGCAAGAACTTGATGCAGCTATATGAAGACGAGGTGAGGCAGAGGAAAGAGGCAGAGGAGTTGGTGAAGAGAAGAAGAGAGGAGCTAGAGAAAGTGAAGAAGGAGAAGGAAGAAGCTTGCTCTGTAGGACAAAACTTCATGAGGTTGTATGAAGAAGAAGCAAGACGTAGAAAAGGAACAGAGGAAGAACTCAGCAAGGTGGCGGCTGAGAAAGACGCAGCGAGCTCAGTCTGTTCGGAGATTCTATTACTCCTTCAGAGTTACACTCGTCGCCATGGAACTCCTTCTGGATTCTCCGATGAGGATTCCGTTACACGCCAGCCTCCCTCATATTTCATATGTCCTATCTCACAGGAAGTAATGCGAGAGCCTCGTGTTGCAGCCGATGGTTTCACCTATGAAGCTGAATCTTTAAGAGAATGGCTCGATAATGGTCACGAGACCTCACCAATGACAAACCTGAAGCTCGCCCACAACAACCTTGTCCCGAATCACGCCCTTCGTTCCGCGATTCAGGAGTGGCTACAACGAAACTCTTGA
Protein Sequence
- >AT1G01660.1
MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEELEAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHHYSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKLYSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEESKREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQERDDALIIILNGRKLYNEELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTLYNEQLRHRKEMEESMKRQEEELEKTKKEKEEACMISKNLMQLYEDEVRQRKEAEELVKRRREELEKVKKEKEEACSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLLLQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS - >AT1G01660.2
MAELMAMGNDVVHVAVKSDVRESRSTLLWALRNLGAKKVCILHVYQPKTASPAARKLEELEAIMYETLHDYFDFCQQEGVNEDDIYISCIEMNDVKQGILELIHESKIKKLVMGAASDHHYSEKMFDLKSRKAKYVYQHAPSSCEVMFMCDGHLIYTKEANLEDCMGETESEAGQSKPKLYSSASPKCSAELVSAIVAYIDTRRDRDMLEPNASEDQSESDRNDQLYRQLKQALMEVEESKREAYEECVRRFKAENTAVEAIRSAREYEAMYNEEAKLRKEGKEALAKQRKMVEKTKQERDDALIIILNGRKLYNEELRRRVEAEEMLGKEKEEHERTKKEIEEVRAIVQDGTLYNEQLRHRKEMEESMKRQEEELEKTKKEKEEACMISKNLMQLYEDEVRQRKEAEELVKRRREELEKVKKEKEEACSVGQNFMRLYEEEARRRKGTEEELSKVAAEKDAASSVCSEILLLLQSYTRRHGTPSGFSDEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALRSAIQEWLQRNS