Information report for AT1G01380
Gene Details
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Functional Descriptions
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0006036 — root epidermis — epidermis de la raíz (Spanish, exact), 根表皮 (Japanese, exact), epiblem (related), rhizodermis (related)
- PO:0000263 — non-hair root epidermal cell — atrichoblast (exact), atricoblasto (Spanish, exact), 非毛根形成細胞、アトリコブラスト (Japanese, exact), non-hair cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0080147 — involved in — root hair cell development
- GO:1900033 — involved in — negative regulation of trichome patterning
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0010026 — involved in — trichome differentiation
- GO:0048765 — involved in — root hair cell differentiation
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005634 — is active in — nucleus
Functional Keywords
Literature and News
- ANGUSTIFOLIA Regulates Actin Filament Alignment for Nuclear Positioning in Leaves. DOI: 10.1104/pp.18.01150 ; PMID: 30404821
- A New Allele of the SPIKE1 Locus Reveals Distinct Regulation of Trichome and Pavement Cell Development and Plant Growth. DOI: 10.3389/fpls.2019.00016 ; PMID: 30733726
- Excess Pyrophosphate Restrains Pavement Cell Morphogenesis and Alters Organ Flatness in Arabidopsis thaliana. DOI: 10.3389/fpls.2020.00031 ; PMID: 32153602
- Arabidopsis C-terminal binding protein ANGUSTIFOLIA modulates transcriptional co-regulation of MYB46 and WRKY33. DOI: 10.1111/nph.16826 ; PMID: 32706429
- The IPGA1-ANGUSTIFOLIA module regulates microtubule organisation and pavement cell shape in Arabidopsis. DOI: 10.1111/nph.18433 ; PMID: 35975703
- ABA activates ADPR cyclase and cADPR induces a subset of ABA-responsive genes in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02055.x ; PMID: 15086800
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis. DOI: 10.1093/nar/gkl204 ; PMID: 16845059
- CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis. DOI: 10.1105/tpc.105.040097 ; PMID: 16829591
- The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size. DOI: 10.1104/pp.17.00109 ; PMID: 28254761
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants. DOI: 10.1007/s00239-002-2426-x ; PMID: 12698294
- Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. DOI: 10.1105/tpc.011544 ; PMID: 12837945
- Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses. DOI: 10.1093/molbev/msg216 ; PMID: 12949148
- Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. DOI: 10.1104/pp.104.047019 ; PMID: 15375205
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Overexpression of AGAMOUS-LIKE 28 (AGL28) promotes flowering by upregulating expression of floral promoters within the autonomous pathway. DOI: 10.1016/j.bbrc.2006.07.121 ; PMID: 16899218
- An atlas of type I MADS box gene expression during female gametophyte and seed development in Arabidopsis. DOI: 10.1104/pp.110.160770 ; PMID: 20631316
- Research progress on the autonomous flowering time pathway in Arabidopsis. DOI: 10.1007/s12298-017-0458-3 ; PMID: 28878488
- FERTILIZATION-INDEPENDENT SEED-Polycomb Repressive Complex 2 Plays a Dual Role in Regulating Type I MADS-Box Genes in Early Endosperm Development. DOI: 10.1104/pp.17.00534 ; PMID: 29523711
- Expression profile analysis of the low-oxygen response in Arabidopsis root cultures. DOI: 10.1105/tpc.004747 ; PMID: 12368499
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
- SAGE analysis of transcriptome responses in Arabidopsis roots exposed to 2,4,6-trinitrotoluene. DOI: 10.1104/pp.103.028019 ; PMID: 14551330
- BYPASS1 negatively regulates a root-derived signal that controls plant architecture. DOI: 10.1016/j.cub.2004.09.045 ; PMID: 15458645
- A two-step strategy for detecting differential gene expression in cDNA microarray data. DOI: 10.1007/s00294-004-0551-3 ; PMID: 15688252
- Dissecting the biosynthetic pathway for the bypass1 root-derived signal. DOI: 10.1111/j.1365-313X.2006.02982.x ; PMID: 17217459
- Components of the Arabidopsis mRNA decapping complex are required for early seedling development. DOI: 10.1105/tpc.106.047621 ; PMID: 17513503
- Silencing of a BYPASS1 homolog results in root-independent pleiotrophic developmental defects in Nicotiana benthamiana. DOI: 10.1007/s11103-008-9384-7 ; PMID: 18716882
- BYPASS1: how a tiny mutant tells a big story about root-to-shoot signaling. DOI: 10.1111/j.1744-7909.2010.00902.x ; PMID: 20074142
- BYPASS1: synthesis of the mobile root-derived signal requires active root growth and arrests early leaf development. DOI: 10.1186/1471-2229-11-28 ; PMID: 21291559
- In the absence of BYPASS1-related gene function, the bps signal disrupts embryogenesis by an auxin-independent mechanism. DOI: 10.1242/dev.077313 ; PMID: 22274700
- The bps signal: embryonic arrest from an auxin-independent mechanism in bypass triple mutants. DOI: 10.4161/psb.20282 ; PMID: 22580686
- The Mobile bypass Signal Arrests Shoot Growth by Disrupting Shoot Apical Meristem Maintenance, Cytokinin Signaling, and WUS Transcription Factor Expression. DOI: 10.1104/pp.16.00474 ; PMID: 27208247
- In BPS1 Downregulated Roots, the BYPASS1 Signal Disrupts the Induction of Cortical Cell Divisions in Bean-Rhizobium Symbiosis. DOI: 10.3390/genes9010011 ; PMID: 29301366
Gene Resources
- UniProt: A0A1P8AQ13
- EMBL: CP002684
- AlphaFoldDB: A0A1P8AQ13
- EnsemblPlants: AT1G01380.2
- Gramene: AT1G01380.2
- ExpressionAtlas: AT1G01380
- OrthoDB: A0A1P8AQ13
- SWISS-MODEL: A0A1P8AQ13
Homologs
- Brassica napus GSBRNA2T00104241001, GSBRNA2T00091199001, GSBRNA2T00123528001
- Brassica oleracea XP_013610246.1, XP_013610245.1
- Brassica rapa XP_009111414.1, XP_009111415.1, XP_009128504.1
Sequences
cDNA Sequence
- >AT1G01380.2
GTACGATATACATCATACACGATTCCTTAATGTGGAAACCGACCAAACCGGTCGTTAAACTTTGCCCTTATAAATACAGAATACACTTCATGTTCTTCCCTTAAAAATCCATCATTCTCTCTTCCTCTCTGCTCTCTCTTTACCTTAAACCGTACCAAACCGTATTGATTGATAATATTGCACGGTGCGATCGTAAATCTTTGTGTACTAAGGTGTCTTTTGAGATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAACATTTTTTTTGGTTAAATCTTTCAATATATGTGATTTTAATAAGGGAATTGAAGATTAGTTTGTTTGTTTGTAAAGGTGGGATTTAATAGCTGGGAGGATTCCAGGAAGAACAGCAGAAGAGATTGAGAGGTTTTGGGTGATGAAGAATCATCGAAGATCTCAATTACGTTGATGGCCAACTCTTATATCATTTTTATAATAATGAGAGAGAAAAGAATGAAAAATATACATATATATTCGTTGGTAATTCTGCAGTTTTGTTCCTGAGTTTTGAAGTAGTTGTGTGTTCGGGATTTTATGAATCACGAATGGAACCTTTAATAAATTGAAGGTAAAGTTTTAATCAATCATAAAAAATAATTTGTGGATATGTATTGGCTTGTAGCACTGAGCCTGAGGCATAAGAAAAAGATTGCTGGGCCTAAATTAGGCATGTGATAAAACCG - >AT1G01380.3
GTACGATATACATCATACACGATTCCTTAATGTGGAAACCGACCAAACCGGTCGTTAAACTTTGCCCTTATAAATACAGAATACACTTCATGTTCTTCCCTTAAAAATCCATCATTCTCTCTTCCTCTCTGCTCTCTCTTTACCTTAAACCGTACCAAACCGTATTGATTGATAATATTGCACGGTGCGATCGTAAATCTTTGTGTACTAAGGTGTCTTTTGAGATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAACATTTTTTTTGGTTAAATCTTTCAATATATGTGATTTTAATAAGGGAATTGAAGATTAGTTTGTTTGTTTGTAAAGGTGGGATTTAATAGCTGGGAGGATTCCAGGAAGAACAGCAGAAGAGATTGAGAGGTTTTGGGTGATGAAGAATCATCGAAGATCTCAATTACGTTGATGGCCAACTCTTATATCATTTTTATAATAATGAGAGAGAAAAGAATGAAAAATATACATATATATTCGTTGGTAATTCTGCAGTTTTGTTCCTGAGTTTTGAAGTAGTTGTGTGTTCGGGATTTTATGAATCACGAATGGAACCTTTAATAAATTGAAGGTAAAGTTTTAATCAATCATAAAAAATAATTTGTGGATATGTATTGGCTTGTAGCACTGAGCCTGAGGCATAAGAAAAAGATTGCTGGGCCTAAATTAGGCATGTGATAAAACCG - >AT1G01380.1
GTACGATATACATCATACACGATTCCTTAATGTGGAAACCGACCAAACCGGTCGTTAAACTTTGCCCTTATAAATACAGAATACACTTCATGTTCTTCCCTTAAAAATCCATCATTCTCTCTTCCTCTCTGCTCTCTCTTTACCTTAAACCGTACCAAACCGTATTGATTGATAATATTGCACGGTGCGATCGTAAATCTTTGTGTACTAAGGTGTCTTTTGAGATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAACATTTTTTTTGGTTAAATCTTTCAATATATGTGATTTTAATAAGGGAATTGAAGATTAGTTTGTTTGTTTGTAAAGGTGGGATTTAATAGCTGGGAGGATTCCAGGAAGAACAGCAGAAGAGATTGAGAGGTTTTGGGTGATGAAGAATCATCGAAGATCTCAATTACGTTGATGGCCAACTCTTATATCATTTTTATAATAATGAGAGAGAAAAGAATGAAAAATATACATATATATTCGTTGGTAATTCTGCAGTTTTGTTCCTGAGTTTTGAAGTAGTTGTGTGTTCGGGATTTTATGAATCACGAATGGAACCTTTAATAAATTGAAGGTAAAGTTTTAATCAATCATAAAAAATAATTTGTGGATATGTATTGGCTTGTAGCACTGAGCCTGAGGCATAAGAAAAAGATTGCTGGGCCTAAATTAGGCATGTGATAAAACCG
CDS Sequence
- >AT1G01380.2
ATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAA - >AT1G01380.3
ATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAA - >AT1G01380.1
ATGAATACGCAGCGTAAGTCGAAGCATCTTAAGACCAATCCAACCATTGTTGCCTCTTCTTCTGAAGAAGTGAGCAGTCTTGAGTGGGAAGAAATAGCAATGGCTCAGGAAGAAGAGGATTTGATTTGCAGGATGTATAAGCTTGTCGGTGAAAGGTTTTTCATGTTTTCTCTTATTCCTTAA
Protein Sequence
- >AT1G01380.2
MNTQRKSKHLKTNPTIVASSSEEVSSLEWEEIAMAQEEEDLICRMYKLVGERFFMFSLIP - >AT1G01380.3
MNTQRKSKHLKTNPTIVASSSEEVSSLEWEEIAMAQEEEDLICRMYKLVGERFFMFSLIP - >AT1G01380.1
MNTQRKSKHLKTNPTIVASSSEEVSSLEWEEIAMAQEEEDLICRMYKLVGERFFMFSLIP